RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 LAPTM4AQ15012 233 aa7.92□□□□□ -1.14
HMGCR-213ENST00000515776 PRR14Q9BWN1 585 aa7.92□□□□□ -1.14
HMGCR-213ENST00000515776 PCDHB3Q9Y5E6 796 aa7.92□□□□□ -1.14
HMGCR-213ENST00000515776 BLOC1S3Q6QNY0 202 aa7.91□□□□□ -1.14
HMGCR-213ENST00000515776 V9GY48 417 aaPredicted RBP7.91□□□□□ -1.14
HMGCR-213ENST00000515776 GGCXP38435 758 aa7.9□□□□□ -1.14
HMGCR-213ENST00000515776 LOC100996750A0A140TA64 210 aa7.89□□□□□ -1.15
HMGCR-213ENST00000515776 PLCB2Q00722 1185 aa7.89□□□□□ -1.15
HMGCR-213ENST00000515776 KRTAP4-6Q9BYQ5 205 aa7.89□□□□□ -1.15
HMGCR-213ENST00000515776 RBM26Q5T8P6 1007 aaKnown RBP7.88□□□□□ -1.15
HMGCR-213ENST00000515776 TMUB1Q9BVT8 246 aa7.88□□□□□ -1.15
HMGCR-213ENST00000515776 SLC10A3P09131 477 aa7.87□□□□□ -1.15
HMGCR-213ENST00000515776 KMT5BQ4FZB7 885 aa7.87□□□□□ -1.15
HMGCR-213ENST00000515776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.86□□□□□ -1.15
HMGCR-213ENST00000515776 TESPA1A2RU30 521 aaPredicted RBP7.86□□□□□ -1.15
HMGCR-213ENST00000515776 LCE2BO14633 110 aa7.86□□□□□ -1.15
HMGCR-213ENST00000515776 ACTN4O43707 911 aaKnown RBP7.86□□□□□ -1.15
HMGCR-213ENST00000515776 OATP04181 439 aa7.86□□□□□ -1.15
HMGCR-213ENST00000515776 CFHP08603 1231 aa7.86□□□□□ -1.15
HMGCR-213ENST00000515776 TRAF7Q6Q0C0 670 aa7.86□□□□□ -1.15
HMGCR-213ENST00000515776 PXYLP1Q8TE99 480 aa7.86□□□□□ -1.15
HMGCR-213ENST00000515776 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
HMGCR-213ENST00000515776 NRG2O14511 850 aaPredicted RBP7.85□□□□□ -1.15
HMGCR-213ENST00000515776 TLL1O43897 1013 aa7.85□□□□□ -1.15
HMGCR-213ENST00000515776 HIC1Q14526 733 aa7.85□□□□□ -1.15
HMGCR-213ENST00000515776 FECHP22830 423 aa7.84□□□□□ -1.15
HMGCR-213ENST00000515776 SMYD5Q6GMV2 418 aa7.84□□□□□ -1.15
HMGCR-213ENST00000515776 PDZRN3Q9UPQ7 1066 aa7.84□□□□□ -1.15
HMGCR-213ENST00000515776 METTL3Q86U44 580 aaKnown RBP7.83□□□□□ -1.16
HMGCR-213ENST00000515776 PPEF1O14829 653 aaPredicted RBP7.82□□□□□ -1.16
HMGCR-213ENST00000515776 EMID1Q96A84 441 aaPredicted RBP7.82□□□□□ -1.16
HMGCR-213ENST00000515776 GNPATO15228 680 aa7.81□□□□□ -1.16
HMGCR-213ENST00000515776 S1PR4O95977 384 aa7.81□□□□□ -1.16
HMGCR-213ENST00000515776 SLC19A1P41440 591 aa7.81□□□□□ -1.16
HMGCR-213ENST00000515776 NR1I2O75469 434 aa7.8□□□□□ -1.16
HMGCR-213ENST00000515776 RSPH4AQ5TD94 716 aa7.8□□□□□ -1.16
HMGCR-213ENST00000515776 GPR37O15354 613 aa7.79□□□□□ -1.16
HMGCR-213ENST00000515776 PUS10Q3MIT2 529 aaKnown RBP7.79□□□□□ -1.16
HMGCR-213ENST00000515776 SCUBE3Q8IX30 993 aa7.79□□□□□ -1.16
HMGCR-213ENST00000515776 ANKLE1Q8NAG6 615 aa7.79□□□□□ -1.16
HMGCR-213ENST00000515776 ADH1BP00325 375 aa7.78□□□□□ -1.16
HMGCR-213ENST00000515776 HAP1P54257 671 aaPredicted RBP7.78□□□□□ -1.16
HMGCR-213ENST00000515776 DAXXQ9UER7 740 aaPredicted RBP7.78□□□□□ -1.16
HMGCR-213ENST00000515776 SPRYD7Q5W111 196 aa7.77□□□□□ -1.17
HMGCR-213ENST00000515776 LIAT1Q6ZQX7 453 aa7.77□□□□□ -1.17
HMGCR-213ENST00000515776 TRIM67Q6ZTA4 783 aa7.77□□□□□ -1.17
HMGCR-213ENST00000515776 NLRP7Q8WX94 980 aa7.77□□□□□ -1.17
HMGCR-213ENST00000515776 RDH13Q8NBN7 331 aa7.76□□□□□ -1.17
HMGCR-213ENST00000515776 SLC6A16Q9GZN6 736 aa7.76□□□□□ -1.17
HMGCR-213ENST00000515776 KDM2AQ9Y2K7 1162 aa7.76□□□□□ -1.17
HMGCR-213ENST00000515776 DDX11L8A8MPP1 907 aa7.75□□□□□ -1.17
HMGCR-213ENST00000515776 ZNF598Q86UK7 904 aaKnown RBP7.75□□□□□ -1.17
HMGCR-213ENST00000515776 PHOX2BQ99453 314 aa7.75□□□□□ -1.17
HMGCR-213ENST00000515776 SPSB2Q99619 263 aa7.75□□□□□ -1.17
HMGCR-213ENST00000515776 PLA2G2CQ5R387 149 aa7.73□□□□□ -1.17
HMGCR-213ENST00000515776 GPIHBP1Q8IV16 184 aa7.73□□□□□ -1.17
HMGCR-213ENST00000515776 FUT2Q10981 343 aa7.72□□□□□ -1.17
HMGCR-213ENST00000515776 MORN1Q5T089 497 aa7.72□□□□□ -1.17
HMGCR-213ENST00000515776 ZNF697Q5TEC3 545 aa7.72□□□□□ -1.17
HMGCR-213ENST00000515776 ATP6V1AP38606 617 aa7.71□□□□□ -1.18
HMGCR-213ENST00000515776 GCGRP47871 477 aa7.71□□□□□ -1.18
HMGCR-213ENST00000515776 ZNF787Q6DD87 383 aa7.71□□□□□ -1.18
HMGCR-213ENST00000515776 TNFRSF10AO00220 468 aa7.7□□□□□ -1.18
HMGCR-213ENST00000515776 GDF9O60383 454 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 PRR20EP86478 221 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 PRR20CP86479 221 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 PRR20DP86480 221 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 PRR20BP86481 221 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 PRR20AP86496 221 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 PKDCCQ504Y2 493 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 SULF1Q8IWU6 871 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 THAP11Q96EK4 314 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 SLC27A5Q9Y2P5 690 aa7.69□□□□□ -1.18
HMGCR-213ENST00000515776 FAM160A2Q8N612 972 aaPredicted RBP7.68□□□□□ -1.18
HMGCR-213ENST00000515776 DGAT1O75907 488 aa7.67□□□□□ -1.18
HMGCR-213ENST00000515776 FMNL1O95466 1100 aaPredicted RBP7.67□□□□□ -1.18
HMGCR-213ENST00000515776 MYT1Q01538 1121 aa7.67□□□□□ -1.18
HMGCR-213ENST00000515776 FAM187AA6NFU0 413 aa7.65□□□□□ -1.18
HMGCR-213ENST00000515776 FOXC1Q12948 553 aa7.65□□□□□ -1.18
HMGCR-213ENST00000515776 BRICD5Q6PL45 260 aa7.65□□□□□ -1.18
HMGCR-213ENST00000515776 FCF1Q9Y324 198 aaKnown RBP7.65□□□□□ -1.18
HMGCR-213ENST00000515776 PRDM9Q9NQV7 894 aa7.64□□□□□ -1.19
HMGCR-213ENST00000515776 PKD2L1Q9P0L9 805 aa7.64□□□□□ -1.19
HMGCR-213ENST00000515776 SALL2Q9Y467 1007 aaPredicted RBP7.64□□□□□ -1.19
HMGCR-213ENST00000515776 IRF6O14896 467 aa7.63□□□□□ -1.19
HMGCR-213ENST00000515776 RPIAP49247 311 aa7.63□□□□□ -1.19
HMGCR-213ENST00000515776 MAP2K5Q13163 448 aa7.63□□□□□ -1.19
HMGCR-213ENST00000515776 GRIPAP1Q4V328 841 aa7.63□□□□□ -1.19
HMGCR-213ENST00000515776 RNF19BQ6ZMZ0 732 aa7.63□□□□□ -1.19
HMGCR-213ENST00000515776 CD2BP2O95400 341 aaKnown RBP7.62□□□□□ -1.19
HMGCR-213ENST00000515776 CD46P15529 392 aa7.62□□□□□ -1.19
HMGCR-213ENST00000515776 VSIG10Q8N0Z9 540 aa7.62□□□□□ -1.19
HMGCR-213ENST00000515776 POTECB2RU33 542 aa7.61□□□□□ -1.19
HMGCR-213ENST00000515776 TULP1O00294 542 aaPredicted RBP7.61□□□□□ -1.19
HMGCR-213ENST00000515776 ZNF775Q96BV0 537 aaPredicted RBP7.61□□□□□ -1.19
HMGCR-213ENST00000515776 MDM2Q00987 491 aaPredicted RBP7.6□□□□□ -1.19
HMGCR-213ENST00000515776 MSS51Q4VC12 460 aa7.6□□□□□ -1.19
HMGCR-213ENST00000515776 MINK1Q8N4C8 1332 aaPredicted RBP7.59□□□□□ -1.19
HMGCR-213ENST00000515776 ST8SIA5O15466 376 aa7.59□□□□□ -1.19
HMGCR-213ENST00000515776 KDM4AO75164 1064 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms