RNA–Protein interactions for RNA: ENST00000513870.1

HMGN1P15-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 15, humanhuman

BASIC

Gene HMGN1P15, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P15-201ENST00000513870 LRCH3Q96II8 777 aa12.21□□□□□ -0.45
HMGN1P15-201ENST00000513870 MYT1LQ9UL68 1186 aa12.21□□□□□ -0.45
HMGN1P15-201ENST00000513870 RNF40O75150 1001 aa12.2□□□□□ -0.46
HMGN1P15-201ENST00000513870 KCTD12Q96CX2 325 aaKnown RBP12.2□□□□□ -0.46
HMGN1P15-201ENST00000513870 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
HMGN1P15-201ENST00000513870 PARP9Q8IXQ6 854 aa12.19□□□□□ -0.46
HMGN1P15-201ENST00000513870 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.19□□□□□ -0.46
HMGN1P15-201ENST00000513870 DAXXQ9UER7 740 aaPredicted RBP12.19□□□□□ -0.46
HMGN1P15-201ENST00000513870 SLC4A3P48751 1232 aa12.18□□□□□ -0.46
HMGN1P15-201ENST00000513870 NEUROD2Q15784 382 aa12.18□□□□□ -0.46
HMGN1P15-201ENST00000513870 BCAMP50895 628 aa12.17□□□□□ -0.46
HMGN1P15-201ENST00000513870 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
HMGN1P15-201ENST00000513870 GIGYF2Q6Y7W6 1299 aaKnown RBP12.16□□□□□ -0.46
HMGN1P15-201ENST00000513870 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
HMGN1P15-201ENST00000513870 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
HMGN1P15-201ENST00000513870 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
HMGN1P15-201ENST00000513870 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
HMGN1P15-201ENST00000513870 DDX11L8A8MPP1 907 aa12.15□□□□□ -0.46
HMGN1P15-201ENST00000513870 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
HMGN1P15-201ENST00000513870 SULF1Q8IWU6 871 aa12.13□□□□□ -0.47
HMGN1P15-201ENST00000513870 FAM217BQ9NTX9 383 aaPredicted RBP12.13□□□□□ -0.47
HMGN1P15-201ENST00000513870 THSD4Q6ZMP0 1018 aa12.12□□□□□ -0.47
HMGN1P15-201ENST00000513870 RDH13Q8NBN7 331 aa12.12□□□□□ -0.47
HMGN1P15-201ENST00000513870 KDM4CQ9H3R0 1056 aa12.12□□□□□ -0.47
HMGN1P15-201ENST00000513870 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
HMGN1P15-201ENST00000513870 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
HMGN1P15-201ENST00000513870 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
HMGN1P15-201ENST00000513870 SSTR3P32745 418 aaPredicted RBP12.1□□□□□ -0.47
HMGN1P15-201ENST00000513870 PPP4CP60510 307 aa12.09□□□□□ -0.47
HMGN1P15-201ENST00000513870 TSR3Q9UJK0 312 aaKnown RBP12.09□□□□□ -0.47
HMGN1P15-201ENST00000513870 MS4A1P11836 297 aa12.08□□□□□ -0.48
HMGN1P15-201ENST00000513870 SLC10A3P09131 477 aa12.07□□□□□ -0.48
HMGN1P15-201ENST00000513870 PTPN5P54829 565 aa12.07□□□□□ -0.48
HMGN1P15-201ENST00000513870 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
HMGN1P15-201ENST00000513870 NECTIN2Q92692 538 aa12.07□□□□□ -0.48
HMGN1P15-201ENST00000513870 CD46P15529 392 aa12.06□□□□□ -0.48
HMGN1P15-201ENST00000513870 WBP1LQ9NX94 342 aa12.06□□□□□ -0.48
HMGN1P15-201ENST00000513870 CFHP08603 1231 aa12.05□□□□□ -0.48
HMGN1P15-201ENST00000513870 BEGAINQ9BUH8 593 aa12.03□□□□□ -0.48
HMGN1P15-201ENST00000513870 KMT5BQ4FZB7 885 aa12.01□□□□□ -0.49
HMGN1P15-201ENST00000513870 FAM117AQ9C073 453 aa12.01□□□□□ -0.49
HMGN1P15-201ENST00000513870 GCGRP47871 477 aa12□□□□□ -0.49
HMGN1P15-201ENST00000513870 APLP1P51693 650 aa11.99□□□□□ -0.49
HMGN1P15-201ENST00000513870 DDRGK1Q96HY6 314 aa11.99□□□□□ -0.49
HMGN1P15-201ENST00000513870 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
HMGN1P15-201ENST00000513870 PRR14Q9BWN1 585 aa11.98□□□□□ -0.49
HMGN1P15-201ENST00000513870 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
HMGN1P15-201ENST00000513870 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
HMGN1P15-201ENST00000513870 NYAP1Q6ZVC0 841 aa11.96□□□□□ -0.49
HMGN1P15-201ENST00000513870 KDM4AO75164 1064 aa11.95□□□□□ -0.5
HMGN1P15-201ENST00000513870 ACTN4O43707 911 aaKnown RBP11.94□□□□□ -0.5
HMGN1P15-201ENST00000513870 PLEKHG3A1L390 1219 aa11.93□□□□□ -0.5
HMGN1P15-201ENST00000513870 FUT2Q10981 343 aa11.93□□□□□ -0.5
HMGN1P15-201ENST00000513870 TBC1D2Q9BYX2 928 aa11.93□□□□□ -0.5
HMGN1P15-201ENST00000513870 SPIRE2Q8WWL2 714 aa11.92□□□□□ -0.5
HMGN1P15-201ENST00000513870 PCDHB3Q9Y5E6 796 aa11.92□□□□□ -0.5
HMGN1P15-201ENST00000513870 USP46P62068 366 aa11.91□□□□□ -0.5
HMGN1P15-201ENST00000513870 DIXDC1Q155Q3 683 aa11.9□□□□□ -0.5
HMGN1P15-201ENST00000513870 PUS10Q3MIT2 529 aaKnown RBP11.9□□□□□ -0.5
HMGN1P15-201ENST00000513870 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
HMGN1P15-201ENST00000513870 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
HMGN1P15-201ENST00000513870 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
HMGN1P15-201ENST00000513870 HOXA2O43364 376 aa11.88□□□□□ -0.51
HMGN1P15-201ENST00000513870 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
HMGN1P15-201ENST00000513870 COPS2P61201 443 aa11.87□□□□□ -0.51
HMGN1P15-201ENST00000513870 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
HMGN1P15-201ENST00000513870 BLOC1S3Q6QNY0 202 aa11.87□□□□□ -0.51
HMGN1P15-201ENST00000513870 MOXD2PA6NHM9 499 aa11.86□□□□□ -0.51
HMGN1P15-201ENST00000513870 NDUFV2P19404 249 aa11.86□□□□□ -0.51
HMGN1P15-201ENST00000513870 HLA-CQ95604 372 aa11.86□□□□□ -0.51
HMGN1P15-201ENST00000513870 MORN1Q5T089 497 aa11.85□□□□□ -0.51
HMGN1P15-201ENST00000513870 MTRQ99707 1265 aa11.85□□□□□ -0.51
HMGN1P15-201ENST00000513870 GUCA2AQ02747 115 aa11.84□□□□□ -0.51
HMGN1P15-201ENST00000513870 POLR3EQ9NVU0 708 aa11.84□□□□□ -0.51
HMGN1P15-201ENST00000513870 NR1I2O75469 434 aa11.83□□□□□ -0.52
HMGN1P15-201ENST00000513870 SH3D19Q5HYK7 790 aa11.83□□□□□ -0.52
HMGN1P15-201ENST00000513870 ATP1B4Q9UN42 357 aaPredicted RBP11.83□□□□□ -0.52
HMGN1P15-201ENST00000513870 FDX1P10109 184 aa11.82□□□□□ -0.52
HMGN1P15-201ENST00000513870 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
HMGN1P15-201ENST00000513870 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
HMGN1P15-201ENST00000513870 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
HMGN1P15-201ENST00000513870 SPTLC1O15269 473 aa11.8□□□□□ -0.52
HMGN1P15-201ENST00000513870 CLK2P49760 499 aaKnown RBP11.8□□□□□ -0.52
HMGN1P15-201ENST00000513870 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
HMGN1P15-201ENST00000513870 CSPP1Q1MSJ5 1256 aa11.8□□□□□ -0.52
HMGN1P15-201ENST00000513870 TJAP1Q5JTD0 557 aa11.8□□□□□ -0.52
HMGN1P15-201ENST00000513870 SCUBE3Q8IX30 993 aa11.8□□□□□ -0.52
HMGN1P15-201ENST00000513870 IL21Q9HBE4 155 aa11.8□□□□□ -0.52
HMGN1P15-201ENST00000513870 LIMD1Q9UGP4 676 aa11.8□□□□□ -0.52
HMGN1P15-201ENST00000513870 ZNF516Q92618 1163 aa11.78□□□□□ -0.52
HMGN1P15-201ENST00000513870 PCDHGC3Q9UN70 934 aa11.78□□□□□ -0.52
HMGN1P15-201ENST00000513870 GJA5P36382 358 aa11.77□□□□□ -0.53
HMGN1P15-201ENST00000513870 TMEM132AQ24JP5 1023 aa11.77□□□□□ -0.53
HMGN1P15-201ENST00000513870 Q3C1V9 767 aa11.77□□□□□ -0.53
HMGN1P15-201ENST00000513870 PCMTD1Q96MG8 357 aaPredicted RBP11.77□□□□□ -0.53
HMGN1P15-201ENST00000513870 GOPCQ9HD26 462 aa11.77□□□□□ -0.53
HMGN1P15-201ENST00000513870 ZPR1O75312 459 aa11.76□□□□□ -0.53
HMGN1P15-201ENST00000513870 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
HMGN1P15-201ENST00000513870 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
HMGN1P15-201ENST00000513870 C6orf229H3BNL8 230 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms