RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 DDRGK1Q96HY6 314 aa8.1□□□□□ -1.11
GYPA-209ENST00000512789 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
GYPA-209ENST00000512789 TMEM134Q9H6X4 195 aa8.1□□□□□ -1.11
GYPA-209ENST00000512789 GIGYF2Q6Y7W6 1299 aaKnown RBP8.09□□□□□ -1.11
GYPA-209ENST00000512789 PARP9Q8IXQ6 854 aa8.09□□□□□ -1.11
GYPA-209ENST00000512789 ANKK1Q8NFD2 765 aa8.09□□□□□ -1.11
GYPA-209ENST00000512789 SSTR3P32745 418 aaPredicted RBP8.08□□□□□ -1.12
GYPA-209ENST00000512789 LRCH3Q96II8 777 aa8.08□□□□□ -1.12
GYPA-209ENST00000512789 ZFRQ96KR1 1074 aaKnown RBP8.08□□□□□ -1.12
GYPA-209ENST00000512789 PHOX2BQ99453 314 aa8.08□□□□□ -1.12
GYPA-209ENST00000512789 HRO43593 1189 aa8.07□□□□□ -1.12
GYPA-209ENST00000512789 MMRN1Q13201 1228 aa8.07□□□□□ -1.12
GYPA-209ENST00000512789 DIXDC1Q155Q3 683 aa8.07□□□□□ -1.12
GYPA-209ENST00000512789 GPBP1L1Q9HC44 474 aaPredicted RBP8.07□□□□□ -1.12
GYPA-209ENST00000512789 DDX11L8A8MPP1 907 aa8.06□□□□□ -1.12
GYPA-209ENST00000512789 RDH13Q8NBN7 331 aa8.06□□□□□ -1.12
GYPA-209ENST00000512789 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.06□□□□□ -1.12
GYPA-209ENST00000512789 RNF40O75150 1001 aa8.05□□□□□ -1.12
GYPA-209ENST00000512789 SWT1Q5T5J6 900 aaKnown RBP8.05□□□□□ -1.12
GYPA-209ENST00000512789 WNT2BQ93097 391 aa8.05□□□□□ -1.12
GYPA-209ENST00000512789 PRR14Q9BWN1 585 aa8.05□□□□□ -1.12
GYPA-209ENST00000512789 FAM217BQ9NTX9 383 aaPredicted RBP8.05□□□□□ -1.12
GYPA-209ENST00000512789 TMEM132AQ24JP5 1023 aa8.04□□□□□ -1.12
GYPA-209ENST00000512789 SAMD7Q7Z3H4 446 aa8.04□□□□□ -1.12
GYPA-209ENST00000512789 NLRP7Q8WX94 980 aa8.04□□□□□ -1.12
GYPA-209ENST00000512789 TMUB1Q9BVT8 246 aa8.04□□□□□ -1.12
GYPA-209ENST00000512789 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
GYPA-209ENST00000512789 C3orf80F5H4A9 247 aa8.03□□□□□ -1.12
GYPA-209ENST00000512789 PPP4CP60510 307 aa8.03□□□□□ -1.12
GYPA-209ENST00000512789 NUTM1Q86Y26 1132 aa8.03□□□□□ -1.12
GYPA-209ENST00000512789 KMT5BQ4FZB7 885 aa8.02□□□□□ -1.13
GYPA-209ENST00000512789 GRIPAP1Q4V328 841 aa8.02□□□□□ -1.13
GYPA-209ENST00000512789 BEGAINQ9BUH8 593 aa8.02□□□□□ -1.13
GYPA-209ENST00000512789 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
GYPA-209ENST00000512789 ATP1B4Q9UN42 357 aaPredicted RBP8.01□□□□□ -1.13
GYPA-209ENST00000512789 SOWAHBA6NEL2 793 aa8□□□□□ -1.13
GYPA-209ENST00000512789 REPIN1Q9BWE0 567 aaKnown RBP8□□□□□ -1.13
GYPA-209ENST00000512789 TSR3Q9UJK0 312 aaKnown RBP8□□□□□ -1.13
GYPA-209ENST00000512789 MS4A1P11836 297 aa7.99□□□□□ -1.13
GYPA-209ENST00000512789 CD46P15529 392 aa7.99□□□□□ -1.13
GYPA-209ENST00000512789 USP46P62068 366 aa7.99□□□□□ -1.13
GYPA-209ENST00000512789 FAM117AQ9C073 453 aa7.99□□□□□ -1.13
GYPA-209ENST00000512789 NYAP1Q6ZVC0 841 aa7.98□□□□□ -1.13
GYPA-209ENST00000512789 KCTD12Q96CX2 325 aaKnown RBP7.98□□□□□ -1.13
GYPA-209ENST00000512789 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
GYPA-209ENST00000512789 HPS5Q9UPZ3 1129 aa7.97□□□□□ -1.13
GYPA-209ENST00000512789 KDM4AO75164 1064 aa7.96□□□□□ -1.14
GYPA-209ENST00000512789 GCGRP47871 477 aa7.96□□□□□ -1.14
GYPA-209ENST00000512789 GOPCQ9HD26 462 aa7.96□□□□□ -1.14
GYPA-209ENST00000512789 CFHP08603 1231 aa7.95□□□□□ -1.14
GYPA-209ENST00000512789 BCAMP50895 628 aa7.95□□□□□ -1.14
GYPA-209ENST00000512789 THSD4Q6ZMP0 1018 aa7.95□□□□□ -1.14
GYPA-209ENST00000512789 PCMTD1Q96MG8 357 aaPredicted RBP7.95□□□□□ -1.14
GYPA-209ENST00000512789 SLC10A3P09131 477 aa7.93□□□□□ -1.14
GYPA-209ENST00000512789 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
GYPA-209ENST00000512789 TBC1D2Q9BYX2 928 aa7.93□□□□□ -1.14
GYPA-209ENST00000512789 ATP6V1AP38606 617 aa7.92□□□□□ -1.14
GYPA-209ENST00000512789 SKIV2LQ15477 1246 aaKnown RBP7.92□□□□□ -1.14
GYPA-209ENST00000512789 SPIRE2Q8WWL2 714 aa7.92□□□□□ -1.14
GYPA-209ENST00000512789 ACTN4O43707 911 aaKnown RBP7.91□□□□□ -1.14
GYPA-209ENST00000512789 GJA5P36382 358 aa7.91□□□□□ -1.14
GYPA-209ENST00000512789 PTPN5P54829 565 aa7.91□□□□□ -1.14
GYPA-209ENST00000512789 RNF166Q96A37 237 aaPredicted RBP7.91□□□□□ -1.14
GYPA-209ENST00000512789 HCSTQ9UBK5 93 aa7.91□□□□□ -1.14
GYPA-209ENST00000512789 PLEKHG3A1L390 1219 aa7.9□□□□□ -1.14
GYPA-209ENST00000512789 CLK2P49760 499 aaKnown RBP7.89□□□□□ -1.15
GYPA-209ENST00000512789 MYSM1Q5VVJ2 828 aa7.89□□□□□ -1.15
GYPA-209ENST00000512789 RIC3Q7Z5B4 369 aa7.89□□□□□ -1.15
GYPA-209ENST00000512789 WBP1LQ9NX94 342 aa7.89□□□□□ -1.15
GYPA-209ENST00000512789 PCDHB3Q9Y5E6 796 aa7.89□□□□□ -1.15
GYPA-209ENST00000512789 NR1I2O75469 434 aa7.88□□□□□ -1.15
GYPA-209ENST00000512789 FUT2Q10981 343 aa7.88□□□□□ -1.15
GYPA-209ENST00000512789 Q3C1V9 767 aa7.88□□□□□ -1.15
GYPA-209ENST00000512789 POLR3EQ9NVU0 708 aa7.88□□□□□ -1.15
GYPA-209ENST00000512789 HOXA2O43364 376 aa7.87□□□□□ -1.15
GYPA-209ENST00000512789 FDX1P10109 184 aa7.87□□□□□ -1.15
GYPA-209ENST00000512789 SPTLC1O15269 473 aa7.86□□□□□ -1.15
GYPA-209ENST00000512789 TUSC1Q2TAM9 212 aa7.86□□□□□ -1.15
GYPA-209ENST00000512789 MOXD2PA6NHM9 499 aa7.85□□□□□ -1.15
GYPA-209ENST00000512789 SPDYE5A6NIY4 337 aa7.85□□□□□ -1.15
GYPA-209ENST00000512789 NUTM2BA6NNL0 878 aaPredicted RBP7.85□□□□□ -1.15
GYPA-209ENST00000512789 NUTM2EB1AL46 878 aaPredicted RBP7.85□□□□□ -1.15
GYPA-209ENST00000512789 APLP1P51693 650 aa7.85□□□□□ -1.15
GYPA-209ENST00000512789 NUTM2DQ5VT03 806 aaPredicted RBP7.85□□□□□ -1.15
GYPA-209ENST00000512789 RSBN1LQ6PCB5 846 aaPredicted RBP7.85□□□□□ -1.15
GYPA-209ENST00000512789 NUTM2AQ8IVF1 878 aaPredicted RBP7.85□□□□□ -1.15
GYPA-209ENST00000512789 PRPF38BQ5VTL8 546 aaKnown RBP7.84□□□□□ -1.15
GYPA-209ENST00000512789 ZBTB3Q9H5J0 574 aa7.84□□□□□ -1.15
GYPA-209ENST00000512789 NDUFV2P19404 249 aa7.83□□□□□ -1.16
GYPA-209ENST00000512789 MORN1Q5T089 497 aa7.83□□□□□ -1.16
GYPA-209ENST00000512789 C6orf229H3BNL8 230 aa7.82□□□□□ -1.16
GYPA-209ENST00000512789 FMNL1O95466 1100 aaPredicted RBP7.82□□□□□ -1.16
GYPA-209ENST00000512789 MTMR2Q13614 643 aa7.82□□□□□ -1.16
GYPA-209ENST00000512789 CSPP1Q1MSJ5 1256 aa7.82□□□□□ -1.16
GYPA-209ENST00000512789 PUS10Q3MIT2 529 aaKnown RBP7.82□□□□□ -1.16
GYPA-209ENST00000512789 SALL2Q9Y467 1007 aaPredicted RBP7.82□□□□□ -1.16
GYPA-209ENST00000512789 ERICH6Q7L0X2 663 aa7.81□□□□□ -1.16
GYPA-209ENST00000512789 SCUBE3Q8IX30 993 aa7.81□□□□□ -1.16
GYPA-209ENST00000512789 IL21Q9HBE4 155 aa7.81□□□□□ -1.16
GYPA-209ENST00000512789 GTF3C3Q9Y5Q9 886 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms