RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 MYSM1Q5VVJ2 828 aa4.64□□□□□ -1.67
PVT1-202ENST00000512617 EXOC8Q8IYI6 725 aa4.64□□□□□ -1.67
PVT1-202ENST00000512617 TMUB1Q9BVT8 246 aa4.64□□□□□ -1.67
PVT1-202ENST00000512617 TPD52L2O43399 206 aaKnown RBP4.63□□□□□ -1.67
PVT1-202ENST00000512617 VAMP1P23763 118 aa4.63□□□□□ -1.67
PVT1-202ENST00000512617 ZNF662Q6ZS27 426 aa4.63□□□□□ -1.67
PVT1-202ENST00000512617 DPH6Q7L8W6 267 aa4.63□□□□□ -1.67
PVT1-202ENST00000512617 ADAMTS19Q8TE59 1207 aa4.63□□□□□ -1.67
PVT1-202ENST00000512617 RBM27Q9P2N5 1060 aaKnown RBP4.63□□□□□ -1.67
PVT1-202ENST00000512617 RB1CC1Q8TDY2 1594 aa4.62□□□□□ -1.67
PVT1-202ENST00000512617 PALM3A6NDB9 673 aaPredicted RBP4.62□□□□□ -1.67
PVT1-202ENST00000512617 SOCS7O14512 581 aa4.62□□□□□ -1.67
PVT1-202ENST00000512617 RAB11FIP3O75154 756 aa4.62□□□□□ -1.67
PVT1-202ENST00000512617 CDCA8Q53HL2 280 aa4.62□□□□□ -1.67
PVT1-202ENST00000512617 RBM42Q9BTD8 480 aaKnown RBP4.62□□□□□ -1.67
PVT1-202ENST00000512617 TBC1D2Q9BYX2 928 aa4.62□□□□□ -1.67
PVT1-202ENST00000512617 TMA7Q9Y2S6 64 aaKnown RBP4.62□□□□□ -1.67
PVT1-202ENST00000512617 NACADO15069 1562 aa4.61□□□□□ -1.67
PVT1-202ENST00000512617 FOSBP53539 338 aa4.61□□□□□ -1.67
PVT1-202ENST00000512617 MARSP56192 900 aaKnown RBP4.61□□□□□ -1.67
PVT1-202ENST00000512617 PPP2R2DQ66LE6 453 aa4.61□□□□□ -1.67
PVT1-202ENST00000512617 NOP9Q86U38 636 aaKnown RBP4.61□□□□□ -1.67
PVT1-202ENST00000512617 ZNF579Q8NAF0 562 aaKnown RBP4.61□□□□□ -1.67
PVT1-202ENST00000512617 BCL11AQ9H165 835 aa4.61□□□□□ -1.67
PVT1-202ENST00000512617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.61□□□□□ -1.671e-6■■■□□ 15.6
PVT1-202ENST00000512617 SUGT1Q9Y2Z0 365 aa4.61□□□□□ -1.67
PVT1-202ENST00000512617 OSBPP22059 807 aa4.6□□□□□ -1.67
PVT1-202ENST00000512617 ERCC5P28715 1186 aaPredicted RBP4.6□□□□□ -1.67
PVT1-202ENST00000512617 WASHC4Q2M389 1173 aa4.6□□□□□ -1.67
PVT1-202ENST00000512617 NOM1Q5C9Z4 860 aaKnown RBP4.6□□□□□ -1.67
PVT1-202ENST00000512617 TEX2Q8IWB9 1127 aa4.6□□□□□ -1.67
PVT1-202ENST00000512617 METTL14Q9HCE5 456 aaKnown RBP4.6□□□□□ -1.67
PVT1-202ENST00000512617 MYO15BQ96JP2 1530 aa4.6□□□□□ -1.67
PVT1-202ENST00000512617 ANKRD33BA6NCL7 494 aa4.59□□□□□ -1.67
PVT1-202ENST00000512617 RECKO95980 971 aa4.59□□□□□ -1.67
PVT1-202ENST00000512617 PRR29P0C7W0 189 aa4.59□□□□□ -1.67
PVT1-202ENST00000512617 ARID4AP29374 1257 aaPredicted RBP4.59□□□□□ -1.67
PVT1-202ENST00000512617 SETQ01105 290 aaPredicted RBP4.59□□□□□ -1.67
PVT1-202ENST00000512617 PTGDRQ13258 359 aa4.59□□□□□ -1.67
PVT1-202ENST00000512617 CCDC181Q5TID7 509 aa4.59□□□□□ -1.67
PVT1-202ENST00000512617 FBXO31Q5XUX0 539 aaPredicted RBP4.59□□□□□ -1.67
PVT1-202ENST00000512617 NPAS4Q8IUM7 802 aa4.59□□□□□ -1.67
PVT1-202ENST00000512617 RBM46Q8TBY0 533 aaKnown RBP4.59□□□□□ -1.67
PVT1-202ENST00000512617 MS4A4AQ96JQ5 239 aa4.59□□□□□ -1.67
PVT1-202ENST00000512617 TSPYL2Q9H2G4 693 aaPredicted RBP4.59□□□□□ -1.67
PVT1-202ENST00000512617 GPHNQ9NQX3 736 aaPredicted RBP4.59□□□□□ -1.67
PVT1-202ENST00000512617 TFIP11Q9UBB9 837 aaKnown RBP4.59□□□□□ -1.67
PVT1-202ENST00000512617 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.59□□□□□ -1.67
PVT1-202ENST00000512617 A0A0U1RQG5 324 aaPredicted RBP4.58□□□□□ -1.68
PVT1-202ENST00000512617 SOWAHDA6NJG2 315 aa4.58□□□□□ -1.68
PVT1-202ENST00000512617 IGBP1P78318 339 aa4.58□□□□□ -1.68
PVT1-202ENST00000512617 DIXDC1Q155Q3 683 aa4.58□□□□□ -1.68
PVT1-202ENST00000512617 HSP90AB4PQ58FF6 505 aa4.58□□□□□ -1.68
PVT1-202ENST00000512617 SPDYE1Q8NFV5 336 aaPredicted RBP4.58□□□□□ -1.68
PVT1-202ENST00000512617 DNAJC2Q99543 621 aaKnown RBP4.58□□□□□ -1.68
PVT1-202ENST00000512617 FAM217BQ9NTX9 383 aaPredicted RBP4.58□□□□□ -1.68
PVT1-202ENST00000512617 BIN2Q9UBW5 565 aaPredicted RBP4.58□□□□□ -1.68
PVT1-202ENST00000512617 NDUFB9Q9Y6M9 179 aa4.58□□□□□ -1.68
PVT1-202ENST00000512617 SBNO2Q9Y2G9 1366 aa4.57□□□□□ -1.68
PVT1-202ENST00000512617 hCG_2014768A0A024R1R8 64 aa4.57□□□□□ -1.68
PVT1-202ENST00000512617 AP1G2O75843 785 aa4.57□□□□□ -1.68
PVT1-202ENST00000512617 TSNAXIP1Q2TAA8 658 aa4.57□□□□□ -1.68
PVT1-202ENST00000512617 MORC4Q8TE76 937 aa4.57□□□□□ -1.68
PVT1-202ENST00000512617 CDCA7Q9BWT1 371 aaPredicted RBP4.57□□□□□ -1.68
PVT1-202ENST00000512617 TANGO6Q9C0B7 1094 aa4.57□□□□□ -1.68
PVT1-202ENST00000512617 LNPKQ9C0E8 428 aa4.57□□□□□ -1.68
PVT1-202ENST00000512617 SLC52A1Q9NWF4 448 aa4.57□□□□□ -1.68
PVT1-202ENST00000512617 ZCCHC6Q5VYS8 1495 aaKnown RBP4.56□□□□□ -1.68
PVT1-202ENST00000512617 TLDC2A0PJX2 215 aa4.56□□□□□ -1.68
PVT1-202ENST00000512617 HMGB1P1B2RPK0 211 aaPredicted RBP4.56□□□□□ -1.68
PVT1-202ENST00000512617 VAC14Q08AM6 782 aa4.56□□□□□ -1.68
PVT1-202ENST00000512617 CUEDC1Q9NWM3 386 aaPredicted RBP4.56□□□□□ -1.68
PVT1-202ENST00000512617 KLHL42Q9P2K6 505 aa4.56□□□□□ -1.68
PVT1-202ENST00000512617 LIMD1Q9UGP4 676 aa4.56□□□□□ -1.68
PVT1-202ENST00000512617 MAFBQ9Y5Q3 323 aaPredicted RBP4.56□□□□□ -1.68
PVT1-202ENST00000512617 MAFGO15525 162 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 CENPBP07199 599 aaPredicted RBP4.55□□□□□ -1.68
PVT1-202ENST00000512617 PTMSP20962 102 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 IBSPP21815 317 aaPredicted RBP4.55□□□□□ -1.68
PVT1-202ENST00000512617 MCCD1P59942 119 aaPredicted RBP4.55□□□□□ -1.68
PVT1-202ENST00000512617 MAP3K9P80192 1104 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 DSG2Q14126 1118 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 PTPROQ16827 1216 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 TMEM164Q5U3C3 297 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 SDE2Q6IQ49 451 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 ZNF710Q8N1W2 664 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 GPATCH3Q96I76 525 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 UCN2Q96RP3 112 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 PHOX2BQ99453 314 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 MAGEC2Q9UBF1 373 aaPredicted RBP4.55□□□□□ -1.68
PVT1-202ENST00000512617 CLEC11AQ9Y240 323 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 DCAF1Q9Y4B6 1507 aa4.55□□□□□ -1.68
PVT1-202ENST00000512617 USP17L8P0C7I0 530 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 SERPINB4P48594 390 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 ANAPC15P60006 121 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 ELOAQ14241 798 aaKnown RBP4.54□□□□□ -1.68
PVT1-202ENST00000512617 HSP90AB2PQ58FF8 381 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 PHLDB3Q6NSJ2 640 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 RIC3Q7Z5B4 369 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 LARGE2Q8N3Y3 721 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms