RNA–Protein interactions for RNA: ENST00000510442.1

SUB1-207, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-207ENST00000510442 E9PCH4 1651 aa30.18■■■□□ 2.42
SUB1-207ENST00000510442 ZFYVE9O95405 1425 aa30.18■■■□□ 2.42
SUB1-207ENST00000510442 IQGAP3Q86VI3 1631 aa30.18■■■□□ 2.42
SUB1-207ENST00000510442 TMEM131LA2VDJ0 1609 aa30.17■■■□□ 2.42
SUB1-207ENST00000510442 MYO5BQ9ULV0 1848 aa30.17■■■□□ 2.42
SUB1-207ENST00000510442 PROSER2Q86WR7 435 aaPredicted RBP30.16■■■□□ 2.42
SUB1-207ENST00000510442 TMEM94Q12767 1356 aa30.15■■■□□ 2.42
SUB1-207ENST00000510442 RIMS2Q9UQ26 1411 aa30.15■■■□□ 2.42
SUB1-207ENST00000510442 CHGAP10645 457 aaKnown RBP30.15■■■□□ 2.42
SUB1-207ENST00000510442 PLEKHG1Q9ULL1 1385 aa30.15■■■□□ 2.42
SUB1-207ENST00000510442 PPP1R15AO75807 674 aaPredicted RBP30.14■■■□□ 2.42
SUB1-207ENST00000510442 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.13■■■□□ 2.41
SUB1-207ENST00000510442 SENP3Q9H4L4 574 aaPredicted RBP30.13■■■□□ 2.41
SUB1-207ENST00000510442 MED1Q15648 1581 aaPredicted RBP30.12■■■□□ 2.41
SUB1-207ENST00000510442 NWD1Q149M9 1564 aa30.07■■■□□ 2.4
SUB1-207ENST00000510442 NKTRP30414 1462 aaKnown RBP30.07■■■□□ 2.4
SUB1-207ENST00000510442 RBM33Q96EV2 1170 aaKnown RBP30.07■■■□□ 2.4
SUB1-207ENST00000510442 TBX22Q9Y458 520 aa30.07■■■□□ 2.4
SUB1-207ENST00000510442 FAM135BQ49AJ0 1406 aa30.05■■■□□ 2.4
SUB1-207ENST00000510442 RRBP1Q9P2E9 1410 aaKnown RBP30.05■■■□□ 2.4
SUB1-207ENST00000510442 CHD2O14647 1828 aaKnown RBP30.03■■■□□ 2.4
SUB1-207ENST00000510442 NUTM2DQ5VT03 806 aaPredicted RBP30.02■■■□□ 2.4
SUB1-207ENST00000510442 MSH6P52701 1360 aa29.98■■■□□ 2.39
SUB1-207ENST00000510442 PHF23Q9BUL5 403 aaPredicted RBP29.97■■■□□ 2.39
SUB1-207ENST00000510442 ADAMTS13Q76LX8 1427 aa29.96■■■□□ 2.39
SUB1-207ENST00000510442 NAIPQ13075 1403 aa29.94■■■□□ 2.38
SUB1-207ENST00000510442 PIK3R4Q99570 1358 aa29.93■■■□□ 2.38
SUB1-207ENST00000510442 SLAIN2Q9P270 581 aa29.93■■■□□ 2.38
SUB1-207ENST00000510442 DIP2AQ14689 1571 aa29.93■■■□□ 2.38
SUB1-207ENST00000510442 SPHKAPQ2M3C7 1700 aa29.93■■■□□ 2.38
SUB1-207ENST00000510442 NCOA3Q9Y6Q9 1424 aa29.92■■■□□ 2.38
SUB1-207ENST00000510442 ROBO1Q9Y6N7 1651 aa29.91■■■□□ 2.38
SUB1-207ENST00000510442 ZNF326Q5BKZ1 582 aaKnown RBP29.88■■■□□ 2.37
SUB1-207ENST00000510442 C14orf37Q86TY3 774 aa29.85■■■□□ 2.37
SUB1-207ENST00000510442 AMOTL2Q9Y2J4 779 aa29.85■■■□□ 2.37
SUB1-207ENST00000510442 TRPM2O94759 1503 aa29.85■■■□□ 2.37
SUB1-207ENST00000510442 C19orf44Q9H6X5 657 aa29.83■■■□□ 2.37
SUB1-207ENST00000510442 HFM1A2PYH4 1435 aa29.82■■■□□ 2.36
SUB1-207ENST00000510442 TRIM52Q96A61 297 aa29.82■■■□□ 2.36
SUB1-207ENST00000510442 PTPRUQ92729 1446 aa29.8■■■□□ 2.36
SUB1-207ENST00000510442 CLTCL1P53675 1640 aa29.79■■■□□ 2.36
SUB1-207ENST00000510442 SETBP1Q9Y6X0 1596 aa29.79■■■□□ 2.36
SUB1-207ENST00000510442 CADPS2Q86UW7 1296 aa29.79■■■□□ 2.36
SUB1-207ENST00000510442 ATF3P18847 181 aa29.78■■■□□ 2.36
SUB1-207ENST00000510442 NRXN3Q9Y4C0 1643 aa29.77■■■□□ 2.36
SUB1-207ENST00000510442 RGS17Q9UGC6 210 aaPredicted RBP29.76■■■□□ 2.35
SUB1-207ENST00000510442 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.76■■■□□ 2.35
SUB1-207ENST00000510442 SLC4A1APQ9BWU0 796 aaKnown RBP29.74■■■□□ 2.35
SUB1-207ENST00000510442 PHLPP1O60346 1717 aa29.74■■■□□ 2.35
SUB1-207ENST00000510442 KIF1BO60333 1816 aa29.73■■■□□ 2.35
SUB1-207ENST00000510442 NEXMIFQ5QGS0 1516 aa29.72■■■□□ 2.35
SUB1-207ENST00000510442 METP08581 1390 aa29.72■■■□□ 2.35
SUB1-207ENST00000510442 JCADQ9P266 1359 aa29.69■■■□□ 2.34
SUB1-207ENST00000510442 XRN1Q8IZH2 1706 aaKnown RBP29.69■■■□□ 2.34
SUB1-207ENST00000510442 VGFO15240 615 aaPredicted RBP29.67■■■□□ 2.34
SUB1-207ENST00000510442 DCCP43146 1447 aa29.65■■■□□ 2.34
SUB1-207ENST00000510442 RPGRIP1LQ68CZ1 1315 aa29.64■■■□□ 2.34
SUB1-207ENST00000510442 COL16A1Q07092 1604 aaPredicted RBP29.63■■■□□ 2.33
SUB1-207ENST00000510442 BRINP3Q76B58 766 aa29.61■■■□□ 2.33
SUB1-207ENST00000510442 AHDC1Q5TGY3 1603 aaPredicted RBP29.6■■■□□ 2.33
SUB1-207ENST00000510442 POTEAQ6S8J7 498 aa29.59■■■□□ 2.33
SUB1-207ENST00000510442 FOXD1Q16676 465 aa29.57■■■□□ 2.32
SUB1-207ENST00000510442 SPATA31A6Q5VVP1 1343 aa29.56■■■□□ 2.32
SUB1-207ENST00000510442 MST1RQ04912 1400 aa29.54■■■□□ 2.32
SUB1-207ENST00000510442 ADGRL3Q9HAR2 1447 aa29.54■■■□□ 2.32
SUB1-207ENST00000510442 MPHOSPH9Q99550 1183 aa29.53■■■□□ 2.32
SUB1-207ENST00000510442 PPLO60437 1756 aa29.5■■■□□ 2.31
SUB1-207ENST00000510442 SETD1AO15047 1707 aaKnown RBP29.5■■■□□ 2.31
SUB1-207ENST00000510442 ASXL1Q8IXJ9 1541 aa29.5■■■□□ 2.31
SUB1-207ENST00000510442 CCDC144AA2RUR9 1427 aa29.48■■■□□ 2.31
SUB1-207ENST00000510442 PTCH1Q13635 1447 aa29.48■■■□□ 2.31
SUB1-207ENST00000510442 SHPRHQ149N8 1683 aa29.48■■■□□ 2.31
SUB1-207ENST00000510442 NALCNQ8IZF0 1738 aa29.48■■■□□ 2.31
SUB1-207ENST00000510442 ROBO2Q9HCK4 1378 aa29.47■■■□□ 2.31
SUB1-207ENST00000510442 ACIN1Q9UKV3 1341 aaKnown RBP29.46■■■□□ 2.31
SUB1-207ENST00000510442 LRP6O75581 1613 aa29.46■■■□□ 2.31
SUB1-207ENST00000510442 MEX3CQ5U5Q3 659 aaKnown RBP29.46■■■□□ 2.31
SUB1-207ENST00000510442 RGL3Q3MIN7 710 aa29.45■■■□□ 2.31
SUB1-207ENST00000510442 PRAG1Q86YV5 1406 aa29.44■■■□□ 2.3
SUB1-207ENST00000510442 SETD5Q9C0A6 1442 aa29.44■■■□□ 2.3
SUB1-207ENST00000510442 LRRC59Q96AG4 307 aaKnown RBP29.43■■■□□ 2.3
SUB1-207ENST00000510442 NHSL1Q5SYE7 1610 aa29.42■■■□□ 2.3
SUB1-207ENST00000510442 ADGRF5Q8IZF2 1346 aa29.42■■■□□ 2.3
SUB1-207ENST00000510442 SPATA31E1Q6ZUB1 1445 aa29.41■■■□□ 2.3
SUB1-207ENST00000510442 C1orf167Q5SNV9 1468 aa29.4■■■□□ 2.3
SUB1-207ENST00000510442 ANKRD30BQ9BXX2 1392 aa29.39■■■□□ 2.3
SUB1-207ENST00000510442 NUTM2BA6NNL0 878 aaPredicted RBP29.39■■■□□ 2.3
SUB1-207ENST00000510442 NUTM2EB1AL46 878 aaPredicted RBP29.39■■■□□ 2.3
SUB1-207ENST00000510442 ZNF772Q68DY9 489 aaPredicted RBP29.39■■■□□ 2.3
SUB1-207ENST00000510442 NUTM2AQ8IVF1 878 aaPredicted RBP29.39■■■□□ 2.3
SUB1-207ENST00000510442 DDX17Q92841 729 aaKnown RBP29.39■■■□□ 2.3
SUB1-207ENST00000510442 ORAI2Q96SN7 254 aa29.33■■■□□ 2.29
SUB1-207ENST00000510442 IFT172Q9UG01 1749 aa29.31■■■□□ 2.28
SUB1-207ENST00000510442 STK26Q9P289 416 aa29.3■■■□□ 2.28
SUB1-207ENST00000510442 PNPLA6Q8IY17 1366 aa29.29■■■□□ 2.28
SUB1-207ENST00000510442 LAMC1P11047 1609 aa29.28■■■□□ 2.28
SUB1-207ENST00000510442 LRPPRCP42704 1394 aaKnown RBP29.27■■■□□ 2.28
SUB1-207ENST00000510442 SOS2Q07890 1332 aaPredicted RBP29.27■■■□□ 2.28
SUB1-207ENST00000510442 TMEM132EQ6IEE7 984 aa29.27■■■□□ 2.28
SUB1-207ENST00000510442 TECPR2O15040 1411 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms