RNA–Protein interactions for RNA: ENST00000502969.1

SRPK1-206, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-206ENST00000502969 SEPT9Q9UHD8 586 aaPredicted RBP9.79□□□□□ -0.84
SRPK1-206ENST00000502969 POTEB3A0JP26 581 aa9.78□□□□□ -0.84
SRPK1-206ENST00000502969 SSTR3P32745 418 aaPredicted RBP9.78□□□□□ -0.84
SRPK1-206ENST00000502969 ADGRD1Q6QNK2 874 aa9.78□□□□□ -0.84
SRPK1-206ENST00000502969 POTEBQ6S5H4 581 aa9.78□□□□□ -0.84
SRPK1-206ENST00000502969 FAM217BQ9NTX9 383 aaPredicted RBP9.78□□□□□ -0.84
SRPK1-206ENST00000502969 GOLGA8CPA6NN73 597 aa9.77□□□□□ -0.85
SRPK1-206ENST00000502969 ANKRD13DQ6ZTN6 518 aa9.77□□□□□ -0.85
SRPK1-206ENST00000502969 TMUB1Q9BVT8 246 aa9.77□□□□□ -0.85
SRPK1-206ENST00000502969 NECTIN2Q92692 538 aa9.75□□□□□ -0.85
SRPK1-206ENST00000502969 FAM117AQ9C073 453 aa9.75□□□□□ -0.85
SRPK1-206ENST00000502969 DDX11L8A8MPP1 907 aa9.74□□□□□ -0.85
SRPK1-206ENST00000502969 C3orf80F5H4A9 247 aa9.74□□□□□ -0.85
SRPK1-206ENST00000502969 MS4A1P11836 297 aa9.74□□□□□ -0.85
SRPK1-206ENST00000502969 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
SRPK1-206ENST00000502969 SLF2Q8IX21 1173 aa9.74□□□□□ -0.85
SRPK1-206ENST00000502969 RDH13Q8NBN7 331 aa9.74□□□□□ -0.85
SRPK1-206ENST00000502969 REPIN1Q9BWE0 567 aaKnown RBP9.74□□□□□ -0.85
SRPK1-206ENST00000502969 RSPH6AQ9H0K4 717 aa9.74□□□□□ -0.85
SRPK1-206ENST00000502969 RNF40O75150 1001 aa9.73□□□□□ -0.85
SRPK1-206ENST00000502969 BEGAINQ9BUH8 593 aa9.73□□□□□ -0.85
SRPK1-206ENST00000502969 SWT1Q5T5J6 900 aaKnown RBP9.72□□□□□ -0.85
SRPK1-206ENST00000502969 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
SRPK1-206ENST00000502969 KRTAP3-2Q9BYR7 98 aa9.72□□□□□ -0.85
SRPK1-206ENST00000502969 BHMG1C9JSJ3 638 aaPredicted RBP9.71□□□□□ -0.86
SRPK1-206ENST00000502969 ANKK1Q8NFD2 765 aa9.71□□□□□ -0.86
SRPK1-206ENST00000502969 LRCH3Q96II8 777 aa9.71□□□□□ -0.86
SRPK1-206ENST00000502969 ZFRQ96KR1 1074 aaKnown RBP9.71□□□□□ -0.86
SRPK1-206ENST00000502969 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
SRPK1-206ENST00000502969 SAMD7Q7Z3H4 446 aa9.69□□□□□ -0.86
SRPK1-206ENST00000502969 NUTM1Q86Y26 1132 aa9.69□□□□□ -0.86
SRPK1-206ENST00000502969 HRO43593 1189 aa9.68□□□□□ -0.86
SRPK1-206ENST00000502969 CD46P15529 392 aa9.68□□□□□ -0.86
SRPK1-206ENST00000502969 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
SRPK1-206ENST00000502969 GOPCQ9HD26 462 aa9.68□□□□□ -0.86
SRPK1-206ENST00000502969 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.68□□□□□ -0.86
SRPK1-206ENST00000502969 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
SRPK1-206ENST00000502969 SH3D19Q5HYK7 790 aa9.65□□□□□ -0.86
SRPK1-206ENST00000502969 WNT2BQ93097 391 aa9.65□□□□□ -0.86
SRPK1-206ENST00000502969 PRR14Q9BWN1 585 aa9.65□□□□□ -0.86
SRPK1-206ENST00000502969 USP46P62068 366 aa9.64□□□□□ -0.87
SRPK1-206ENST00000502969 KMT5BQ4FZB7 885 aa9.64□□□□□ -0.87
SRPK1-206ENST00000502969 GRIPAP1Q4V328 841 aa9.64□□□□□ -0.87
SRPK1-206ENST00000502969 GTF3C3Q9Y5Q9 886 aa9.64□□□□□ -0.87
SRPK1-206ENST00000502969 TBC1D2Q9BYX2 928 aa9.63□□□□□ -0.87
SRPK1-206ENST00000502969 KDM4AO75164 1064 aa9.62□□□□□ -0.87
SRPK1-206ENST00000502969 SKIV2LQ15477 1246 aaKnown RBP9.62□□□□□ -0.87
SRPK1-206ENST00000502969 SOWAHBA6NEL2 793 aa9.61□□□□□ -0.87
SRPK1-206ENST00000502969 CFHP08603 1231 aa9.61□□□□□ -0.87
SRPK1-206ENST00000502969 GCGRP47871 477 aa9.61□□□□□ -0.87
SRPK1-206ENST00000502969 CLK2P49760 499 aaKnown RBP9.6□□□□□ -0.87
SRPK1-206ENST00000502969 PPP4CP60510 307 aa9.6□□□□□ -0.87
SRPK1-206ENST00000502969 MYSM1Q5VVJ2 828 aa9.6□□□□□ -0.87
SRPK1-206ENST00000502969 ERICH6Q7L0X2 663 aa9.6□□□□□ -0.87
SRPK1-206ENST00000502969 SPIRE2Q8WWL2 714 aa9.6□□□□□ -0.87
SRPK1-206ENST00000502969 HPS5Q9UPZ3 1129 aa9.6□□□□□ -0.87
SRPK1-206ENST00000502969 SLC10A3P09131 477 aa9.58□□□□□ -0.88
SRPK1-206ENST00000502969 POLR3EQ9NVU0 708 aa9.58□□□□□ -0.88
SRPK1-206ENST00000502969 TSR3Q9UJK0 312 aaKnown RBP9.58□□□□□ -0.88
SRPK1-206ENST00000502969 GJA5P36382 358 aa9.57□□□□□ -0.88
SRPK1-206ENST00000502969 RIC3Q7Z5B4 369 aa9.57□□□□□ -0.88
SRPK1-206ENST00000502969 BCAMP50895 628 aa9.56□□□□□ -0.88
SRPK1-206ENST00000502969 KCTD12Q96CX2 325 aaKnown RBP9.56□□□□□ -0.88
SRPK1-206ENST00000502969 HOXA2O43364 376 aa9.55□□□□□ -0.88
SRPK1-206ENST00000502969 RSBN1LQ6PCB5 846 aaPredicted RBP9.54□□□□□ -0.88
SRPK1-206ENST00000502969 MOXD2PA6NHM9 499 aa9.53□□□□□ -0.88
SRPK1-206ENST00000502969 SPTLC1O15269 473 aa9.53□□□□□ -0.88
SRPK1-206ENST00000502969 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
SRPK1-206ENST00000502969 FUT2Q10981 343 aa9.53□□□□□ -0.88
SRPK1-206ENST00000502969 TUSC1Q2TAM9 212 aa9.53□□□□□ -0.88
SRPK1-206ENST00000502969 THSD4Q6ZMP0 1018 aa9.53□□□□□ -0.88
SRPK1-206ENST00000502969 NYAP1Q6ZVC0 841 aa9.53□□□□□ -0.88
SRPK1-206ENST00000502969 RNF166Q96A37 237 aaPredicted RBP9.53□□□□□ -0.88
SRPK1-206ENST00000502969 ACTN4O43707 911 aaKnown RBP9.52□□□□□ -0.89
SRPK1-206ENST00000502969 FDX1P10109 184 aa9.52□□□□□ -0.89
SRPK1-206ENST00000502969 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
SRPK1-206ENST00000502969 NUTM2BA6NNL0 878 aaPredicted RBP9.5□□□□□ -0.89
SRPK1-206ENST00000502969 NUTM2EB1AL46 878 aaPredicted RBP9.5□□□□□ -0.89
SRPK1-206ENST00000502969 NDUFV2P19404 249 aa9.5□□□□□ -0.89
SRPK1-206ENST00000502969 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
SRPK1-206ENST00000502969 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
SRPK1-206ENST00000502969 NUTM2AQ8IVF1 878 aaPredicted RBP9.5□□□□□ -0.89
SRPK1-206ENST00000502969 ZBTB3Q9H5J0 574 aa9.5□□□□□ -0.89
SRPK1-206ENST00000502969 Q3C1V9 767 aa9.49□□□□□ -0.89
SRPK1-206ENST00000502969 PRPF38BQ5VTL8 546 aaKnown RBP9.49□□□□□ -0.89
SRPK1-206ENST00000502969 PROCA1Q8NCQ7 364 aaPredicted RBP9.49□□□□□ -0.89
SRPK1-206ENST00000502969 LIMD1Q9UGP4 676 aa9.49□□□□□ -0.89
SRPK1-206ENST00000502969 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
SRPK1-206ENST00000502969 NR1I2O75469 434 aa9.48□□□□□ -0.89
SRPK1-206ENST00000502969 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
SRPK1-206ENST00000502969 WBP1LQ9NX94 342 aa9.48□□□□□ -0.89
SRPK1-206ENST00000502969 APLP1P51693 650 aa9.47□□□□□ -0.89
SRPK1-206ENST00000502969 FLIIQ13045 1269 aa9.47□□□□□ -0.89
SRPK1-206ENST00000502969 SPDYE5A6NIY4 337 aa9.46□□□□□ -0.9
SRPK1-206ENST00000502969 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
SRPK1-206ENST00000502969 PTPN5P54829 565 aa9.46□□□□□ -0.9
SRPK1-206ENST00000502969 MTMR2Q13614 643 aa9.46□□□□□ -0.9
SRPK1-206ENST00000502969 C14orf37Q86TY3 774 aa9.46□□□□□ -0.9
SRPK1-206ENST00000502969 RFC5P40937 340 aa9.44□□□□□ -0.9
SRPK1-206ENST00000502969 GUCA2AQ02747 115 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms