RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 REPIN1Q9BWE0 567 aaKnown RBP13.13□□□□□ -0.31
ATXN3-206ENST00000502250 KDM4CQ9H3R0 1056 aa13.13□□□□□ -0.31
ATXN3-206ENST00000502250 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
ATXN3-206ENST00000502250 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
ATXN3-206ENST00000502250 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
ATXN3-206ENST00000502250 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
ATXN3-206ENST00000502250 GOLGA8CPA6NN73 597 aa13.1□□□□□ -0.31
ATXN3-206ENST00000502250 SWT1Q5T5J6 900 aaKnown RBP13.1□□□□□ -0.31
ATXN3-206ENST00000502250 SLC4A3P48751 1232 aa13.09□□□□□ -0.31
ATXN3-206ENST00000502250 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
ATXN3-206ENST00000502250 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
ATXN3-206ENST00000502250 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
ATXN3-206ENST00000502250 LRCH3Q96II8 777 aa13.07□□□□□ -0.32
ATXN3-206ENST00000502250 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
ATXN3-206ENST00000502250 MS4A1P11836 297 aa13.05□□□□□ -0.32
ATXN3-206ENST00000502250 RSPH4AQ5TD94 716 aa13.05□□□□□ -0.32
ATXN3-206ENST00000502250 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
ATXN3-206ENST00000502250 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.05□□□□□ -0.32
ATXN3-206ENST00000502250 SOWAHBA6NEL2 793 aa13.04□□□□□ -0.32
ATXN3-206ENST00000502250 WNT2BQ93097 391 aa13.04□□□□□ -0.32
ATXN3-206ENST00000502250 CD46P15529 392 aa13.03□□□□□ -0.32
ATXN3-206ENST00000502250 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
ATXN3-206ENST00000502250 DDX11L8A8MPP1 907 aa13.02□□□□□ -0.33
ATXN3-206ENST00000502250 MYT1LQ9UL68 1186 aa13□□□□□ -0.33
ATXN3-206ENST00000502250 SLC10A3P09131 477 aa12.99□□□□□ -0.33
ATXN3-206ENST00000502250 THSD4Q6ZMP0 1018 aa12.98□□□□□ -0.33
ATXN3-206ENST00000502250 SPNS2Q8IVW8 549 aa12.98□□□□□ -0.33
ATXN3-206ENST00000502250 RDH13Q8NBN7 331 aa12.98□□□□□ -0.33
ATXN3-206ENST00000502250 BEGAINQ9BUH8 593 aa12.98□□□□□ -0.33
ATXN3-206ENST00000502250 FAM117AQ9C073 453 aa12.98□□□□□ -0.33
ATXN3-206ENST00000502250 BCAMP50895 628 aa12.97□□□□□ -0.33
ATXN3-206ENST00000502250 TSR3Q9UJK0 312 aaKnown RBP12.97□□□□□ -0.33
ATXN3-206ENST00000502250 RNF40O75150 1001 aa12.96□□□□□ -0.33
ATXN3-206ENST00000502250 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
ATXN3-206ENST00000502250 HPS5Q9UPZ3 1129 aa12.95□□□□□ -0.34
ATXN3-206ENST00000502250 PLEKHG3A1L390 1219 aa12.94□□□□□ -0.34
ATXN3-206ENST00000502250 GCGRP47871 477 aa12.94□□□□□ -0.34
ATXN3-206ENST00000502250 PPP4CP60510 307 aa12.93□□□□□ -0.34
ATXN3-206ENST00000502250 DIXDC1Q155Q3 683 aa12.93□□□□□ -0.34
ATXN3-206ENST00000502250 PRR14Q9BWN1 585 aa12.93□□□□□ -0.34
ATXN3-206ENST00000502250 CFHP08603 1231 aa12.92□□□□□ -0.34
ATXN3-206ENST00000502250 TMEM132AQ24JP5 1023 aa12.92□□□□□ -0.34
ATXN3-206ENST00000502250 USP46P62068 366 aa12.91□□□□□ -0.34
ATXN3-206ENST00000502250 KMT5BQ4FZB7 885 aa12.91□□□□□ -0.34
ATXN3-206ENST00000502250 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
ATXN3-206ENST00000502250 IL27Q8NEV9 243 aa12.91□□□□□ -0.34
ATXN3-206ENST00000502250 RSPH6AQ9H0K4 717 aa12.9□□□□□ -0.34
ATXN3-206ENST00000502250 KDM4AO75164 1064 aa12.89□□□□□ -0.35
ATXN3-206ENST00000502250 GOPCQ9HD26 462 aa12.89□□□□□ -0.35
ATXN3-206ENST00000502250 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
ATXN3-206ENST00000502250 NUTM1Q86Y26 1132 aa12.88□□□□□ -0.35
ATXN3-206ENST00000502250 RNF166Q96A37 237 aaPredicted RBP12.88□□□□□ -0.35
ATXN3-206ENST00000502250 WBP1LQ9NX94 342 aa12.88□□□□□ -0.35
ATXN3-206ENST00000502250 ACTN4O43707 911 aaKnown RBP12.87□□□□□ -0.35
ATXN3-206ENST00000502250 SPIRE2Q8WWL2 714 aa12.87□□□□□ -0.35
ATXN3-206ENST00000502250 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
ATXN3-206ENST00000502250 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
ATXN3-206ENST00000502250 GJA5P36382 358 aa12.84□□□□□ -0.35
ATXN3-206ENST00000502250 APLP1P51693 650 aa12.84□□□□□ -0.35
ATXN3-206ENST00000502250 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
ATXN3-206ENST00000502250 MYSM1Q5VVJ2 828 aa12.83□□□□□ -0.36
ATXN3-206ENST00000502250 HOXA2O43364 376 aa12.82□□□□□ -0.36
ATXN3-206ENST00000502250 FUT2Q10981 343 aa12.82□□□□□ -0.36
ATXN3-206ENST00000502250 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
ATXN3-206ENST00000502250 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
ATXN3-206ENST00000502250 SKIV2LQ15477 1246 aaKnown RBP12.81□□□□□ -0.36
ATXN3-206ENST00000502250 HCSTQ9UBK5 93 aa12.81□□□□□ -0.36
ATXN3-206ENST00000502250 PTPN5P54829 565 aa12.8□□□□□ -0.36
ATXN3-206ENST00000502250 SPTLC1O15269 473 aa12.79□□□□□ -0.36
ATXN3-206ENST00000502250 TUSC1Q2TAM9 212 aa12.79□□□□□ -0.36
ATXN3-206ENST00000502250 MOXD2PA6NHM9 499 aa12.77□□□□□ -0.37
ATXN3-206ENST00000502250 RSBN1LQ6PCB5 846 aaPredicted RBP12.77□□□□□ -0.37
ATXN3-206ENST00000502250 PCDHB3Q9Y5E6 796 aa12.77□□□□□ -0.37
ATXN3-206ENST00000502250 CLK2P49760 499 aaKnown RBP12.76□□□□□ -0.37
ATXN3-206ENST00000502250 MORN1Q5T089 497 aa12.76□□□□□ -0.37
ATXN3-206ENST00000502250 RIC3Q7Z5B4 369 aa12.76□□□□□ -0.37
ATXN3-206ENST00000502250 PCMTD1Q96MG8 357 aaPredicted RBP12.75□□□□□ -0.37
ATXN3-206ENST00000502250 FDX1P10109 184 aa12.73□□□□□ -0.37
ATXN3-206ENST00000502250 NR1I2O75469 434 aa12.72□□□□□ -0.37
ATXN3-206ENST00000502250 NDUFV2P19404 249 aa12.72□□□□□ -0.37
ATXN3-206ENST00000502250 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
ATXN3-206ENST00000502250 LIMD1Q9UGP4 676 aa12.72□□□□□ -0.37
ATXN3-206ENST00000502250 PUS10Q3MIT2 529 aaKnown RBP12.71□□□□□ -0.37
ATXN3-206ENST00000502250 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.71□□□□□ -0.37
ATXN3-206ENST00000502250 Q3C1V9 767 aa12.7□□□□□ -0.38
ATXN3-206ENST00000502250 PRPF38BQ5VTL8 546 aaKnown RBP12.7□□□□□ -0.38
ATXN3-206ENST00000502250 BLOC1S3Q6QNY0 202 aa12.7□□□□□ -0.38
ATXN3-206ENST00000502250 HLA-CQ95604 372 aa12.7□□□□□ -0.38
ATXN3-206ENST00000502250 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
ATXN3-206ENST00000502250 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
ATXN3-206ENST00000502250 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
ATXN3-206ENST00000502250 GUCA2AQ02747 115 aa12.67□□□□□ -0.38
ATXN3-206ENST00000502250 TJAP1Q5JTD0 557 aa12.67□□□□□ -0.38
ATXN3-206ENST00000502250 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
ATXN3-206ENST00000502250 MTRQ99707 1265 aa12.67□□□□□ -0.38
ATXN3-206ENST00000502250 SCUBE3Q8IX30 993 aa12.66□□□□□ -0.38
ATXN3-206ENST00000502250 IL21Q9HBE4 155 aa12.66□□□□□ -0.38
ATXN3-206ENST00000502250 SPDYE5A6NIY4 337 aa12.65□□□□□ -0.38
ATXN3-206ENST00000502250 LILRB3O75022 631 aa12.65□□□□□ -0.38
ATXN3-206ENST00000502250 COPS2P61201 443 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms