RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 NUTM2FA1L443 756 aa8.53□□□□□ -1.04
PSPC1-205ENST00000497722 DGAT1O75907 488 aa8.53□□□□□ -1.04
PSPC1-205ENST00000497722 NECTIN2Q92692 538 aa8.53□□□□□ -1.04
PSPC1-205ENST00000497722 FCHSD2O94868 740 aa8.52□□□□□ -1.05
PSPC1-205ENST00000497722 MYT1Q01538 1121 aa8.52□□□□□ -1.05
PSPC1-205ENST00000497722 ADGRG1Q9Y653 693 aa8.52□□□□□ -1.05
PSPC1-205ENST00000497722 TREML4Q6UXN2 200 aa8.51□□□□□ -1.05
PSPC1-205ENST00000497722 RNF40O75150 1001 aa8.5□□□□□ -1.05
PSPC1-205ENST00000497722 SMYD5Q6GMV2 418 aa8.5□□□□□ -1.05
PSPC1-205ENST00000497722 TRIM67Q6ZTA4 783 aa8.5□□□□□ -1.05
PSPC1-205ENST00000497722 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
PSPC1-205ENST00000497722 APLP1P51693 650 aa8.49□□□□□ -1.05
PSPC1-205ENST00000497722 HDGFP51858 240 aaKnown RBP8.49□□□□□ -1.05
PSPC1-205ENST00000497722 SWT1Q5T5J6 900 aaKnown RBP8.49□□□□□ -1.05
PSPC1-205ENST00000497722 PRR20EP86478 221 aa8.48□□□□□ -1.05
PSPC1-205ENST00000497722 PRR20CP86479 221 aa8.48□□□□□ -1.05
PSPC1-205ENST00000497722 PRR20DP86480 221 aa8.48□□□□□ -1.05
PSPC1-205ENST00000497722 PRR20BP86481 221 aa8.48□□□□□ -1.05
PSPC1-205ENST00000497722 PRR20AP86496 221 aa8.48□□□□□ -1.05
PSPC1-205ENST00000497722 HIC1Q14526 733 aa8.48□□□□□ -1.05
PSPC1-205ENST00000497722 POTECB2RU33 542 aa8.47□□□□□ -1.05
PSPC1-205ENST00000497722 FECHP22830 423 aa8.47□□□□□ -1.05
PSPC1-205ENST00000497722 FAM161AQ3B820 660 aa8.47□□□□□ -1.05
PSPC1-205ENST00000497722 LCE2AQ5TA79 106 aaPredicted RBP8.47□□□□□ -1.05
PSPC1-205ENST00000497722 SLC19A1P41440 591 aa8.46□□□□□ -1.06
PSPC1-205ENST00000497722 DNAJB2P25686 324 aa8.45□□□□□ -1.06
PSPC1-205ENST00000497722 COPS2P61201 443 aa8.45□□□□□ -1.06
PSPC1-205ENST00000497722 RBM46Q8TBY0 533 aaKnown RBP8.45□□□□□ -1.06
PSPC1-205ENST00000497722 PXYLP1Q8TE99 480 aa8.45□□□□□ -1.06
PSPC1-205ENST00000497722 TMEM134Q9H6X4 195 aa8.45□□□□□ -1.06
PSPC1-205ENST00000497722 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
PSPC1-205ENST00000497722 GNPATO15228 680 aa8.44□□□□□ -1.06
PSPC1-205ENST00000497722 STK17AQ9UEE5 414 aa8.44□□□□□ -1.06
PSPC1-205ENST00000497722 FAM187AA6NFU0 413 aa8.43□□□□□ -1.06
PSPC1-205ENST00000497722 ZPR1O75312 459 aa8.43□□□□□ -1.06
PSPC1-205ENST00000497722 ZNF598Q86UK7 904 aaKnown RBP8.43□□□□□ -1.06
PSPC1-205ENST00000497722 SLF2Q8IX21 1173 aa8.43□□□□□ -1.06
PSPC1-205ENST00000497722 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
PSPC1-205ENST00000497722 METTL3Q86U44 580 aaKnown RBP8.42□□□□□ -1.06
PSPC1-205ENST00000497722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.41□□□□□ -1.06
PSPC1-205ENST00000497722 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
PSPC1-205ENST00000497722 OATP04181 439 aa8.41□□□□□ -1.06
PSPC1-205ENST00000497722 PRR14Q9BWN1 585 aa8.4□□□□□ -1.06
PSPC1-205ENST00000497722 SLC4A3P48751 1232 aa8.39□□□□□ -1.07
PSPC1-205ENST00000497722 GPIHBP1Q8IV16 184 aa8.39□□□□□ -1.07
PSPC1-205ENST00000497722 SLC10A3P09131 477 aa8.38□□□□□ -1.07
PSPC1-205ENST00000497722 ZNF697Q5TEC3 545 aa8.38□□□□□ -1.07
PSPC1-205ENST00000497722 EMID1Q96A84 441 aaPredicted RBP8.38□□□□□ -1.07
PSPC1-205ENST00000497722 PHOX2BQ99453 314 aa8.38□□□□□ -1.07
PSPC1-205ENST00000497722 WFS1O76024 890 aa8.37□□□□□ -1.07
PSPC1-205ENST00000497722 ANKLE1Q8NAG6 615 aa8.37□□□□□ -1.07
PSPC1-205ENST00000497722 AAASQ9NRG9 546 aa8.37□□□□□ -1.07
PSPC1-205ENST00000497722 ST8SIA5O15466 376 aa8.36□□□□□ -1.07
PSPC1-205ENST00000497722 INSM1Q01101 510 aaPredicted RBP8.36□□□□□ -1.07
PSPC1-205ENST00000497722 TNFRSF10AO00220 468 aa8.35□□□□□ -1.07
PSPC1-205ENST00000497722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.35□□□□□ -1.07
PSPC1-205ENST00000497722 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
PSPC1-205ENST00000497722 GDF9O60383 454 aa8.34□□□□□ -1.07
PSPC1-205ENST00000497722 WIPF1O43516 503 aa8.33□□□□□ -1.08
PSPC1-205ENST00000497722 ACTN4O43707 911 aaKnown RBP8.32□□□□□ -1.08
PSPC1-205ENST00000497722 CRIPAKQ8N1N5 446 aa8.32□□□□□ -1.08
PSPC1-205ENST00000497722 DAXXQ9UER7 740 aaPredicted RBP8.32□□□□□ -1.08
PSPC1-205ENST00000497722 MAP2K5Q13163 448 aa8.31□□□□□ -1.08
PSPC1-205ENST00000497722 NLRP7Q8WX94 980 aa8.31□□□□□ -1.08
PSPC1-205ENST00000497722 IRF6O14896 467 aa8.3□□□□□ -1.08
PSPC1-205ENST00000497722 CFHP08603 1231 aa8.3□□□□□ -1.08
PSPC1-205ENST00000497722 LMOD2Q6P5Q4 547 aa8.3□□□□□ -1.08
PSPC1-205ENST00000497722 BLOC1S3Q6QNY0 202 aa8.3□□□□□ -1.08
PSPC1-205ENST00000497722 LIAT1Q6ZQX7 453 aa8.3□□□□□ -1.08
PSPC1-205ENST00000497722 TULP1O00294 542 aaPredicted RBP8.29□□□□□ -1.08
PSPC1-205ENST00000497722 TLL1O43897 1013 aa8.29□□□□□ -1.08
PSPC1-205ENST00000497722 S1PR4O95977 384 aa8.28□□□□□ -1.08
PSPC1-205ENST00000497722 KMT5BQ4FZB7 885 aa8.28□□□□□ -1.08
PSPC1-205ENST00000497722 MINK1Q8N4C8 1332 aaPredicted RBP8.28□□□□□ -1.08
PSPC1-205ENST00000497722 C11orf95C9JLR9 678 aaPredicted RBP8.27□□□□□ -1.09
PSPC1-205ENST00000497722 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
PSPC1-205ENST00000497722 LOC100996750A0A140TA64 210 aa8.26□□□□□ -1.09
PSPC1-205ENST00000497722 PPEF1O14829 653 aaPredicted RBP8.26□□□□□ -1.09
PSPC1-205ENST00000497722 KRTAP4-6Q9BYQ5 205 aa8.26□□□□□ -1.09
PSPC1-205ENST00000497722 CTC1Q2NKJ3 1217 aa8.24□□□□□ -1.09
PSPC1-205ENST00000497722 GMPR2Q9P2T1 348 aaKnown RBP8.24□□□□□ -1.09
PSPC1-205ENST00000497722 DDX11L8A8MPP1 907 aa8.23□□□□□ -1.09
PSPC1-205ENST00000497722 AXIN1O15169 862 aa8.23□□□□□ -1.09
PSPC1-205ENST00000497722 AVPP01185 164 aa8.23□□□□□ -1.09
PSPC1-205ENST00000497722 GCGRP47871 477 aa8.23□□□□□ -1.09
PSPC1-205ENST00000497722 RSPH4AQ5TD94 716 aa8.23□□□□□ -1.09
PSPC1-205ENST00000497722 CCDC102AQ96A19 550 aa8.23□□□□□ -1.09
PSPC1-205ENST00000497722 ZMYND10O75800 440 aa8.22□□□□□ -1.09
PSPC1-205ENST00000497722 ADH1BP00325 375 aa8.22□□□□□ -1.09
PSPC1-205ENST00000497722 BARGINQ6ZT62 677 aa8.22□□□□□ -1.09
PSPC1-205ENST00000497722 SULF1Q8IWU6 871 aa8.22□□□□□ -1.09
PSPC1-205ENST00000497722 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
PSPC1-205ENST00000497722 CD46P15529 392 aa8.21□□□□□ -1.1
PSPC1-205ENST00000497722 FOXC1Q12948 553 aa8.21□□□□□ -1.1
PSPC1-205ENST00000497722 MORN1Q5T089 497 aa8.21□□□□□ -1.1
PSPC1-205ENST00000497722 SCUBE3Q8IX30 993 aa8.21□□□□□ -1.1
PSPC1-205ENST00000497722 ZC3H15Q8WU90 426 aaKnown RBP8.21□□□□□ -1.1
PSPC1-205ENST00000497722 PKD2L1Q9P0L9 805 aa8.21□□□□□ -1.1
PSPC1-205ENST00000497722 DACH1Q9UI36 760 aa8.21□□□□□ -1.1
PSPC1-205ENST00000497722 NR1I2O75469 434 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms