RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 PXYLP1Q8TE99 480 aa9.93□□□□□ -0.82
RBM39-234ENST00000487604 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
RBM39-234ENST00000487604 IL21Q9HBE4 155 aa9.92□□□□□ -0.82
RBM39-234ENST00000487604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
RBM39-234ENST00000487604 METTL3Q86U44 580 aaKnown RBP9.91□□□□□ -0.82
RBM39-234ENST00000487604 ZNF516Q92618 1163 aa9.91□□□□□ -0.82
RBM39-234ENST00000487604 GPIHBP1Q8IV16 184 aa9.9□□□□□ -0.82
RBM39-234ENST00000487604 SLC10A3P09131 477 aa9.87□□□□□ -0.83
RBM39-234ENST00000487604 COPS2P61201 443 aa9.86□□□□□ -0.83
RBM39-234ENST00000487604 PRR14Q9BWN1 585 aa9.86□□□□□ -0.83
RBM39-234ENST00000487604 NKX2-3Q8TAU0 364 aa9.85□□□□□ -0.83
RBM39-234ENST00000487604 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
RBM39-234ENST00000487604 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
RBM39-234ENST00000487604 NLRP7Q8WX94 980 aa9.84□□□□□ -0.83
RBM39-234ENST00000487604 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
RBM39-234ENST00000487604 ACTN4O43707 911 aaKnown RBP9.83□□□□□ -0.84
RBM39-234ENST00000487604 CFHP08603 1231 aa9.83□□□□□ -0.84
RBM39-234ENST00000487604 BLOC1S3Q6QNY0 202 aa9.82□□□□□ -0.84
RBM39-234ENST00000487604 ZPR1O75312 459 aa9.81□□□□□ -0.84
RBM39-234ENST00000487604 KMT5BQ4FZB7 885 aa9.81□□□□□ -0.84
RBM39-234ENST00000487604 PPP1R18Q6NYC8 613 aa9.81□□□□□ -0.84
RBM39-234ENST00000487604 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
RBM39-234ENST00000487604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
RBM39-234ENST00000487604 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
RBM39-234ENST00000487604 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.78□□□□□ -0.84
RBM39-234ENST00000487604 IRF6O14896 467 aa9.77□□□□□ -0.85
RBM39-234ENST00000487604 MAP2K5Q13163 448 aa9.77□□□□□ -0.85
RBM39-234ENST00000487604 IRX2Q9BZI1 471 aaPredicted RBP9.76□□□□□ -0.85
RBM39-234ENST00000487604 DDX11L8A8MPP1 907 aa9.75□□□□□ -0.85
RBM39-234ENST00000487604 RDH13Q8NBN7 331 aa9.75□□□□□ -0.85
RBM39-234ENST00000487604 MINK1Q8N4C8 1332 aaPredicted RBP9.75□□□□□ -0.85
RBM39-234ENST00000487604 TLL1O43897 1013 aa9.74□□□□□ -0.85
RBM39-234ENST00000487604 NR1I2O75469 434 aa9.73□□□□□ -0.85
RBM39-234ENST00000487604 PUS10Q3MIT2 529 aaKnown RBP9.73□□□□□ -0.85
RBM39-234ENST00000487604 SCUBE3Q8IX30 993 aa9.73□□□□□ -0.85
RBM39-234ENST00000487604 PRKD2Q9BZL6 878 aa9.73□□□□□ -0.85
RBM39-234ENST00000487604 GGCXP38435 758 aa9.72□□□□□ -0.85
RBM39-234ENST00000487604 LMOD2Q6P5Q4 547 aa9.72□□□□□ -0.85
RBM39-234ENST00000487604 SULF1Q8IWU6 871 aa9.72□□□□□ -0.85
RBM39-234ENST00000487604 TMUB1Q9BVT8 246 aa9.72□□□□□ -0.85
RBM39-234ENST00000487604 GCGRP47871 477 aa9.71□□□□□ -0.86
RBM39-234ENST00000487604 RNF223E7ERA6 249 aa9.69□□□□□ -0.86
RBM39-234ENST00000487604 FUT2Q10981 343 aa9.69□□□□□ -0.86
RBM39-234ENST00000487604 CCDC102AQ96A19 550 aa9.69□□□□□ -0.86
RBM39-234ENST00000487604 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
RBM39-234ENST00000487604 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
RBM39-234ENST00000487604 MORN1Q5T089 497 aa9.68□□□□□ -0.86
RBM39-234ENST00000487604 S1PR4O95977 384 aa9.67□□□□□ -0.86
RBM39-234ENST00000487604 ADH1BP00325 375 aa9.67□□□□□ -0.86
RBM39-234ENST00000487604 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
RBM39-234ENST00000487604 PPEF1O14829 653 aaPredicted RBP9.65□□□□□ -0.86
RBM39-234ENST00000487604 CD46P15529 392 aa9.65□□□□□ -0.86
RBM39-234ENST00000487604 EMID1Q96A84 441 aaPredicted RBP9.65□□□□□ -0.86
RBM39-234ENST00000487604 SLC27A5Q9Y2P5 690 aa9.65□□□□□ -0.86
RBM39-234ENST00000487604 ZMYND10O75800 440 aa9.64□□□□□ -0.87
RBM39-234ENST00000487604 BARGINQ6ZT62 677 aa9.64□□□□□ -0.87
RBM39-234ENST00000487604 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
RBM39-234ENST00000487604 THAP11Q96EK4 314 aa9.64□□□□□ -0.87
RBM39-234ENST00000487604 SPSB2Q99619 263 aa9.64□□□□□ -0.87
RBM39-234ENST00000487604 ANKLE1Q8NAG6 615 aa9.63□□□□□ -0.87
RBM39-234ENST00000487604 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
RBM39-234ENST00000487604 GFRA3O60609 400 aa9.62□□□□□ -0.87
RBM39-234ENST00000487604 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
RBM39-234ENST00000487604 CLCN1P35523 988 aa9.61□□□□□ -0.87
RBM39-234ENST00000487604 SLC19A1P41440 591 aa9.61□□□□□ -0.87
RBM39-234ENST00000487604 GPCPD1Q9NPB8 672 aa9.61□□□□□ -0.87
RBM39-234ENST00000487604 FAM160A2Q8N612 972 aaPredicted RBP9.6□□□□□ -0.87
RBM39-234ENST00000487604 SALL2Q9Y467 1007 aaPredicted RBP9.6□□□□□ -0.87
RBM39-234ENST00000487604 KDM4AO75164 1064 aa9.59□□□□□ -0.87
RBM39-234ENST00000487604 LAPTM4AQ15012 233 aa9.59□□□□□ -0.87
RBM39-234ENST00000487604 GRIPAP1Q4V328 841 aa9.59□□□□□ -0.87
RBM39-234ENST00000487604 BRICD5Q6PL45 260 aa9.59□□□□□ -0.87
RBM39-234ENST00000487604 REPIN1Q9BWE0 567 aaKnown RBP9.59□□□□□ -0.87
RBM39-234ENST00000487604 FAM217BQ9NTX9 383 aaPredicted RBP9.59□□□□□ -0.87
RBM39-234ENST00000487604 FMNL1O95466 1100 aaPredicted RBP9.58□□□□□ -0.88
RBM39-234ENST00000487604 LIAT1Q6ZQX7 453 aa9.58□□□□□ -0.88
RBM39-234ENST00000487604 PLA2G2CQ5R387 149 aa9.57□□□□□ -0.88
RBM39-234ENST00000487604 SPRYD7Q5W111 196 aa9.56□□□□□ -0.88
RBM39-234ENST00000487604 RNF19BQ6ZMZ0 732 aa9.56□□□□□ -0.88
RBM39-234ENST00000487604 Q6ZNB5 142 aa9.56□□□□□ -0.88
RBM39-234ENST00000487604 USP46P62068 366 aa9.55□□□□□ -0.88
RBM39-234ENST00000487604 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
RBM39-234ENST00000487604 NRG2O14511 850 aaPredicted RBP9.54□□□□□ -0.88
RBM39-234ENST00000487604 HLA-CQ95604 372 aa9.54□□□□□ -0.88
RBM39-234ENST00000487604 AMHR2Q16671 573 aa9.53□□□□□ -0.88
RBM39-234ENST00000487604 Q3C1V9 767 aa9.53□□□□□ -0.88
RBM39-234ENST00000487604 TRIM67Q6ZTA4 783 aa9.53□□□□□ -0.88
RBM39-234ENST00000487604 PRDM9Q9NQV7 894 aa9.53□□□□□ -0.88
RBM39-234ENST00000487604 LCE2BO14633 110 aa9.52□□□□□ -0.89
RBM39-234ENST00000487604 HOXA2O43364 376 aa9.52□□□□□ -0.89
RBM39-234ENST00000487604 SSTR3P32745 418 aaPredicted RBP9.52□□□□□ -0.89
RBM39-234ENST00000487604 ZNF598Q86UK7 904 aaKnown RBP9.52□□□□□ -0.89
RBM39-234ENST00000487604 TTLL12Q14166 644 aaPredicted RBP9.51□□□□□ -0.89
RBM39-234ENST00000487604 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
RBM39-234ENST00000487604 NUTM1Q86Y26 1132 aa9.5□□□□□ -0.89
RBM39-234ENST00000487604 FCF1Q9Y324 198 aaKnown RBP9.5□□□□□ -0.89
RBM39-234ENST00000487604 TRIM66O15016 1216 aa9.49□□□□□ -0.89
RBM39-234ENST00000487604 GUCA2AQ02747 115 aa9.49□□□□□ -0.89
RBM39-234ENST00000487604 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
RBM39-234ENST00000487604 USB1Q9BQ65 265 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms