RNA–Protein interactions for RNA: ENST00000485194.1

ATP13A3-208, Transcript of ATPase 13A3, humanhuman

TSL 5

Gene ATP13A3, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-208ENST00000485194 SEPT9Q9UHD8 586 aaPredicted RBP10.48□□□□□ -0.73
ATP13A3-208ENST00000485194 NBPF3Q9H094 633 aa10.47□□□□□ -0.73
ATP13A3-208ENST00000485194 FAM217BQ9NTX9 383 aaPredicted RBP10.47□□□□□ -0.73
ATP13A3-208ENST00000485194 VPS9D1Q9Y2B5 631 aa10.47□□□□□ -0.73
ATP13A3-208ENST00000485194 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
ATP13A3-208ENST00000485194 SULF1Q8IWU6 871 aa10.46□□□□□ -0.73
ATP13A3-208ENST00000485194 TMUB1Q9BVT8 246 aa10.46□□□□□ -0.73
ATP13A3-208ENST00000485194 ATP1B4Q9UN42 357 aaPredicted RBP10.46□□□□□ -0.73
ATP13A3-208ENST00000485194 SLC4A3P48751 1232 aa10.45□□□□□ -0.74
ATP13A3-208ENST00000485194 BEGAINQ9BUH8 593 aa10.45□□□□□ -0.74
ATP13A3-208ENST00000485194 DDX11L8A8MPP1 907 aa10.44□□□□□ -0.74
ATP13A3-208ENST00000485194 LSM11P83369 360 aaKnown RBP eCLIP10.44□□□□□ -0.74
ATP13A3-208ENST00000485194 ANKRD13DQ6ZTN6 518 aa10.44□□□□□ -0.74
ATP13A3-208ENST00000485194 TMEM134Q9H6X4 195 aa10.44□□□□□ -0.74
ATP13A3-208ENST00000485194 TK2O00142 265 aa10.43□□□□□ -0.74
ATP13A3-208ENST00000485194 RSPH4AQ5TD94 716 aa10.43□□□□□ -0.74
ATP13A3-208ENST00000485194 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
ATP13A3-208ENST00000485194 PLEKHG3A1L390 1219 aa10.42□□□□□ -0.74
ATP13A3-208ENST00000485194 FAM98CQ17RN3 349 aaKnown RBP10.42□□□□□ -0.74
ATP13A3-208ENST00000485194 RDH13Q8NBN7 331 aa10.42□□□□□ -0.74
ATP13A3-208ENST00000485194 ADGRD1Q6QNK2 874 aa10.41□□□□□ -0.74
ATP13A3-208ENST00000485194 GOLGA8CPA6NN73 597 aa10.4□□□□□ -0.74
ATP13A3-208ENST00000485194 RNF40O75150 1001 aa10.4□□□□□ -0.74
ATP13A3-208ENST00000485194 SWT1Q5T5J6 900 aaKnown RBP10.4□□□□□ -0.74
ATP13A3-208ENST00000485194 LAPTM4BQ86VI4 370 aa10.4□□□□□ -0.74
ATP13A3-208ENST00000485194 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
ATP13A3-208ENST00000485194 NUTM1Q86Y26 1132 aa10.38□□□□□ -0.75
ATP13A3-208ENST00000485194 PCMTD1Q96MG8 357 aaPredicted RBP10.38□□□□□ -0.75
ATP13A3-208ENST00000485194 DIXDC1Q155Q3 683 aa10.37□□□□□ -0.75
ATP13A3-208ENST00000485194 SLF2Q8IX21 1173 aa10.37□□□□□ -0.75
ATP13A3-208ENST00000485194 CD46P15529 392 aa10.36□□□□□ -0.75
ATP13A3-208ENST00000485194 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
ATP13A3-208ENST00000485194 BHMG1C9JSJ3 638 aaPredicted RBP10.35□□□□□ -0.75
ATP13A3-208ENST00000485194 ZFRQ96KR1 1074 aaKnown RBP10.35□□□□□ -0.75
ATP13A3-208ENST00000485194 SH3D19Q5HYK7 790 aa10.33□□□□□ -0.76
ATP13A3-208ENST00000485194 LRCH3Q96II8 777 aa10.33□□□□□ -0.76
ATP13A3-208ENST00000485194 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
ATP13A3-208ENST00000485194 POLR3EQ9NVU0 708 aa10.33□□□□□ -0.76
ATP13A3-208ENST00000485194 SKIV2LQ15477 1246 aaKnown RBP10.32□□□□□ -0.76
ATP13A3-208ENST00000485194 ANKK1Q8NFD2 765 aa10.32□□□□□ -0.76
ATP13A3-208ENST00000485194 GOPCQ9HD26 462 aa10.32□□□□□ -0.76
ATP13A3-208ENST00000485194 SPIRE2Q8WWL2 714 aa10.31□□□□□ -0.76
ATP13A3-208ENST00000485194 HRO43593 1189 aa10.3□□□□□ -0.76
ATP13A3-208ENST00000485194 MYSM1Q5VVJ2 828 aa10.3□□□□□ -0.76
ATP13A3-208ENST00000485194 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.3□□□□□ -0.76
ATP13A3-208ENST00000485194 KDM4AO75164 1064 aa10.29□□□□□ -0.76
ATP13A3-208ENST00000485194 NECTIN2Q92692 538 aa10.29□□□□□ -0.76
ATP13A3-208ENST00000485194 SLC10A3P09131 477 aa10.28□□□□□ -0.76
ATP13A3-208ENST00000485194 GCGRP47871 477 aa10.28□□□□□ -0.76
ATP13A3-208ENST00000485194 CLK2P49760 499 aaKnown RBP10.28□□□□□ -0.76
ATP13A3-208ENST00000485194 PLA2G2EQ9NZK7 142 aa10.28□□□□□ -0.76
ATP13A3-208ENST00000485194 KMT5BQ4FZB7 885 aa10.27□□□□□ -0.77
ATP13A3-208ENST00000485194 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.77
ATP13A3-208ENST00000485194 RIC3Q7Z5B4 369 aa10.27□□□□□ -0.77
ATP13A3-208ENST00000485194 WNT2BQ93097 391 aa10.27□□□□□ -0.77
ATP13A3-208ENST00000485194 CFHP08603 1231 aa10.26□□□□□ -0.77
ATP13A3-208ENST00000485194 PPP4CP60510 307 aa10.25□□□□□ -0.77
ATP13A3-208ENST00000485194 USP46P62068 366 aa10.25□□□□□ -0.77
ATP13A3-208ENST00000485194 CSPP1Q1MSJ5 1256 aa10.25□□□□□ -0.77
ATP13A3-208ENST00000485194 GRIPAP1Q4V328 841 aa10.25□□□□□ -0.77
ATP13A3-208ENST00000485194 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
ATP13A3-208ENST00000485194 PROCA1Q8NCQ7 364 aaPredicted RBP10.24□□□□□ -0.77
ATP13A3-208ENST00000485194 MOXD2PA6NHM9 499 aa10.23□□□□□ -0.77
ATP13A3-208ENST00000485194 HPS5Q9UPZ3 1129 aa10.23□□□□□ -0.77
ATP13A3-208ENST00000485194 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
ATP13A3-208ENST00000485194 NDUFV2P19404 249 aa10.22□□□□□ -0.77
ATP13A3-208ENST00000485194 BCAMP50895 628 aa10.22□□□□□ -0.77
ATP13A3-208ENST00000485194 PRR14Q9BWN1 585 aa10.22□□□□□ -0.77
ATP13A3-208ENST00000485194 RSBN1LQ6PCB5 846 aaPredicted RBP10.21□□□□□ -0.77
ATP13A3-208ENST00000485194 TSR3Q9UJK0 312 aaKnown RBP10.21□□□□□ -0.77
ATP13A3-208ENST00000485194 SPTLC1O15269 473 aa10.2□□□□□ -0.78
ATP13A3-208ENST00000485194 HOXA2O43364 376 aa10.2□□□□□ -0.78
ATP13A3-208ENST00000485194 FDX1P10109 184 aa10.2□□□□□ -0.78
ATP13A3-208ENST00000485194 FUT2Q10981 343 aa10.2□□□□□ -0.78
ATP13A3-208ENST00000485194 KCTD12Q96CX2 325 aaKnown RBP10.2□□□□□ -0.78
ATP13A3-208ENST00000485194 HCSTQ9UBK5 93 aa10.2□□□□□ -0.78
ATP13A3-208ENST00000485194 LIMD1Q9UGP4 676 aa10.2□□□□□ -0.78
ATP13A3-208ENST00000485194 NUTM2BA6NNL0 878 aaPredicted RBP10.19□□□□□ -0.78
ATP13A3-208ENST00000485194 NUTM2EB1AL46 878 aaPredicted RBP10.19□□□□□ -0.78
ATP13A3-208ENST00000485194 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
ATP13A3-208ENST00000485194 NUTM2AQ8IVF1 878 aaPredicted RBP10.19□□□□□ -0.78
ATP13A3-208ENST00000485194 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
ATP13A3-208ENST00000485194 GJA5P36382 358 aa10.17□□□□□ -0.78
ATP13A3-208ENST00000485194 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.17□□□□□ -0.78
ATP13A3-208ENST00000485194 ACTN4O43707 911 aaKnown RBP10.16□□□□□ -0.78
ATP13A3-208ENST00000485194 GUCA2AQ02747 115 aa10.16□□□□□ -0.78
ATP13A3-208ENST00000485194 TIMELESSQ9UNS1 1208 aa10.16□□□□□ -0.78
ATP13A3-208ENST00000485194 TUSC1Q2TAM9 212 aa10.15□□□□□ -0.78
ATP13A3-208ENST00000485194 HLA-CQ95604 372 aa10.15□□□□□ -0.78
ATP13A3-208ENST00000485194 PCDHB15Q9Y5E8 787 aa10.15□□□□□ -0.78
ATP13A3-208ENST00000485194 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
ATP13A3-208ENST00000485194 FLIIQ13045 1269 aa10.14□□□□□ -0.79
ATP13A3-208ENST00000485194 PUS10Q3MIT2 529 aaKnown RBP10.14□□□□□ -0.79
ATP13A3-208ENST00000485194 ZBTB3Q9H5J0 574 aa10.14□□□□□ -0.79
ATP13A3-208ENST00000485194 RFC5P40937 340 aa10.13□□□□□ -0.79
ATP13A3-208ENST00000485194 THSD4Q6ZMP0 1018 aa10.13□□□□□ -0.79
ATP13A3-208ENST00000485194 WBP1LQ9NX94 342 aa10.13□□□□□ -0.79
ATP13A3-208ENST00000485194 PTPN5P54829 565 aa10.12□□□□□ -0.79
ATP13A3-208ENST00000485194 QPCTQ16769 361 aa10.12□□□□□ -0.79
ATP13A3-208ENST00000485194 PRPF38BQ5VTL8 546 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms