RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 SMAPO00193 183 aa9.11□□□□□ -0.95
FNDC3B-210ENST00000483344 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.95
FNDC3B-210ENST00000483344 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
FNDC3B-210ENST00000483344 BEGAINQ9BUH8 593 aa9.11□□□□□ -0.95
FNDC3B-210ENST00000483344 GOPCQ9HD26 462 aa9.11□□□□□ -0.95
FNDC3B-210ENST00000483344 RABGEF1Q9UJ41 708 aa9.11□□□□□ -0.95
FNDC3B-210ENST00000483344 ERICH6Q7L0X2 663 aa9.1□□□□□ -0.95
FNDC3B-210ENST00000483344 TMEM134Q9H6X4 195 aa9.1□□□□□ -0.95
FNDC3B-210ENST00000483344 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
FNDC3B-210ENST00000483344 RSPH6AQ9H0K4 717 aa9.08□□□□□ -0.96
FNDC3B-210ENST00000483344 VPS9D1Q9Y2B5 631 aa9.07□□□□□ -0.96
FNDC3B-210ENST00000483344 SH3D19Q5HYK7 790 aa9.06□□□□□ -0.96
FNDC3B-210ENST00000483344 PCMTD1Q96MG8 357 aaPredicted RBP9.06□□□□□ -0.96
FNDC3B-210ENST00000483344 SEPT9Q9UHD8 586 aaPredicted RBP9.06□□□□□ -0.96
FNDC3B-210ENST00000483344 TIMELESSQ9UNS1 1208 aa9.06□□□□□ -0.96
FNDC3B-210ENST00000483344 DDX11L8A8MPP1 907 aa9.05□□□□□ -0.96
FNDC3B-210ENST00000483344 CD46P15529 392 aa9.04□□□□□ -0.96
FNDC3B-210ENST00000483344 DIXDC1Q155Q3 683 aa9.04□□□□□ -0.96
FNDC3B-210ENST00000483344 FAM98CQ17RN3 349 aaKnown RBP9.04□□□□□ -0.96
FNDC3B-210ENST00000483344 NBPF3Q9H094 633 aa9.04□□□□□ -0.96
FNDC3B-210ENST00000483344 TK2O00142 265 aa9.03□□□□□ -0.96
FNDC3B-210ENST00000483344 HDGFP51858 240 aaKnown RBP9.03□□□□□ -0.96
FNDC3B-210ENST00000483344 SKIV2LQ15477 1246 aaKnown RBP9.03□□□□□ -0.96
FNDC3B-210ENST00000483344 RSPH4AQ5TD94 716 aa9.02□□□□□ -0.97
FNDC3B-210ENST00000483344 C14orf37Q86TY3 774 aa9.02□□□□□ -0.97
FNDC3B-210ENST00000483344 LAPTM4BQ86VI4 370 aa9.02□□□□□ -0.97
FNDC3B-210ENST00000483344 TBC1D2Q9BYX2 928 aa9.02□□□□□ -0.97
FNDC3B-210ENST00000483344 SLC4A3P48751 1232 aa9.01□□□□□ -0.97
FNDC3B-210ENST00000483344 SWT1Q5T5J6 900 aaKnown RBP9.01□□□□□ -0.97
FNDC3B-210ENST00000483344 MYSM1Q5VVJ2 828 aa9.01□□□□□ -0.97
FNDC3B-210ENST00000483344 RDH13Q8NBN7 331 aa9.01□□□□□ -0.97
FNDC3B-210ENST00000483344 BHMG1C9JSJ3 638 aaPredicted RBP9□□□□□ -0.97
FNDC3B-210ENST00000483344 ADGRD1Q6QNK2 874 aa9□□□□□ -0.97
FNDC3B-210ENST00000483344 NUTM1Q86Y26 1132 aa9□□□□□ -0.97
FNDC3B-210ENST00000483344 POLR3EQ9NVU0 708 aa9□□□□□ -0.97
FNDC3B-210ENST00000483344 ATP1B4Q9UN42 357 aaPredicted RBP9□□□□□ -0.97
FNDC3B-210ENST00000483344 SPIRE2Q8WWL2 714 aa8.99□□□□□ -0.97
FNDC3B-210ENST00000483344 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
FNDC3B-210ENST00000483344 MRPL50Q8N5N7 158 aaKnown RBP8.98□□□□□ -0.97
FNDC3B-210ENST00000483344 CLK2P49760 499 aaKnown RBP8.97□□□□□ -0.97
FNDC3B-210ENST00000483344 SAMD7Q7Z3H4 446 aa8.97□□□□□ -0.97
FNDC3B-210ENST00000483344 GCGRP47871 477 aa8.96□□□□□ -0.98
FNDC3B-210ENST00000483344 PROCA1Q8NCQ7 364 aaPredicted RBP8.96□□□□□ -0.98
FNDC3B-210ENST00000483344 ZFRQ96KR1 1074 aaKnown RBP8.96□□□□□ -0.98
FNDC3B-210ENST00000483344 KDM4AO75164 1064 aa8.95□□□□□ -0.98
FNDC3B-210ENST00000483344 SLC10A3P09131 477 aa8.95□□□□□ -0.98
FNDC3B-210ENST00000483344 STAC3Q96MF2 364 aa8.95□□□□□ -0.98
FNDC3B-210ENST00000483344 HRO43593 1189 aa8.94□□□□□ -0.98
FNDC3B-210ENST00000483344 RIC3Q7Z5B4 369 aa8.94□□□□□ -0.98
FNDC3B-210ENST00000483344 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.94□□□□□ -0.98
FNDC3B-210ENST00000483344 RNF40O75150 1001 aa8.93□□□□□ -0.98
FNDC3B-210ENST00000483344 USP46P62068 366 aa8.93□□□□□ -0.98
FNDC3B-210ENST00000483344 MOXD2PA6NHM9 499 aa8.92□□□□□ -0.98
FNDC3B-210ENST00000483344 SPTLC1O15269 473 aa8.92□□□□□ -0.98
FNDC3B-210ENST00000483344 GJA5P36382 358 aa8.92□□□□□ -0.98
FNDC3B-210ENST00000483344 RSBN1LQ6PCB5 846 aaPredicted RBP8.92□□□□□ -0.98
FNDC3B-210ENST00000483344 LRCH3Q96II8 777 aa8.92□□□□□ -0.98
FNDC3B-210ENST00000483344 LIMD1Q9UGP4 676 aa8.92□□□□□ -0.98
FNDC3B-210ENST00000483344 GOLGA8CPA6NN73 597 aa8.91□□□□□ -0.98
FNDC3B-210ENST00000483344 FLIIQ13045 1269 aa8.91□□□□□ -0.98
FNDC3B-210ENST00000483344 TUSC1Q2TAM9 212 aa8.91□□□□□ -0.98
FNDC3B-210ENST00000483344 NECTIN2Q92692 538 aa8.91□□□□□ -0.98
FNDC3B-210ENST00000483344 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.91□□□□□ -0.98
FNDC3B-210ENST00000483344 CFHP08603 1231 aa8.9□□□□□ -0.98
FNDC3B-210ENST00000483344 NDUFV2P19404 249 aa8.9□□□□□ -0.98
FNDC3B-210ENST00000483344 HOXA2O43364 376 aa8.89□□□□□ -0.99
FNDC3B-210ENST00000483344 ANKK1Q8NFD2 765 aa8.89□□□□□ -0.99
FNDC3B-210ENST00000483344 CSPP1Q1MSJ5 1256 aa8.88□□□□□ -0.99
FNDC3B-210ENST00000483344 GRIPAP1Q4V328 841 aa8.88□□□□□ -0.99
FNDC3B-210ENST00000483344 KMT5BQ4FZB7 885 aa8.87□□□□□ -0.99
FNDC3B-210ENST00000483344 SOWAHBA6NEL2 793 aa8.86□□□□□ -0.99
FNDC3B-210ENST00000483344 FDX1P10109 184 aa8.86□□□□□ -0.99
FNDC3B-210ENST00000483344 RFC5P40937 340 aa8.86□□□□□ -0.99
FNDC3B-210ENST00000483344 FUT2Q10981 343 aa8.86□□□□□ -0.99
FNDC3B-210ENST00000483344 PPP2R2DQ66LE6 453 aa8.86□□□□□ -0.99
FNDC3B-210ENST00000483344 PLA2G2EQ9NZK7 142 aa8.86□□□□□ -0.99
FNDC3B-210ENST00000483344 PCDHB15Q9Y5E8 787 aa8.86□□□□□ -0.99
FNDC3B-210ENST00000483344 QPCTQ16769 361 aa8.85□□□□□ -0.99
FNDC3B-210ENST00000483344 PRPF38BQ5VTL8 546 aaKnown RBP8.85□□□□□ -0.99
FNDC3B-210ENST00000483344 WNT2BQ93097 391 aa8.85□□□□□ -0.99
FNDC3B-210ENST00000483344 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
FNDC3B-210ENST00000483344 NUTM2BA6NNL0 878 aaPredicted RBP8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 NUTM2EB1AL46 878 aaPredicted RBP8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 LILRB3O75022 631 aa8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 ATP6V1AP38606 617 aa8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 PPP4CP60510 307 aa8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 TMEM259Q4ZIN3 620 aa8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 NUTM2DQ5VT03 806 aaPredicted RBP8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 NUTM2AQ8IVF1 878 aaPredicted RBP8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 PRR14Q9BWN1 585 aa8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 ZBTB3Q9H5J0 574 aa8.84□□□□□ -0.99
FNDC3B-210ENST00000483344 BCAMP50895 628 aa8.83□□□□□ -1
FNDC3B-210ENST00000483344 GUCA2AQ02747 115 aa8.83□□□□□ -1
FNDC3B-210ENST00000483344 FBXO31Q5XUX0 539 aaPredicted RBP8.83□□□□□ -1
FNDC3B-210ENST00000483344 HLA-CQ95604 372 aa8.83□□□□□ -1
FNDC3B-210ENST00000483344 KCTD12Q96CX2 325 aaKnown RBP8.83□□□□□ -1
FNDC3B-210ENST00000483344 ZMYND15Q9H091 742 aa8.83□□□□□ -1
FNDC3B-210ENST00000483344 PCDHGC3Q9UN70 934 aa8.83□□□□□ -1
FNDC3B-210ENST00000483344 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
FNDC3B-210ENST00000483344 ACTN4O43707 911 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms