RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TTLL12Q14166 644 aaPredicted RBP6.11□□□□□ -1.43
FNDC3B-209ENST00000478016 SPNS2Q8IVW8 549 aa6.11□□□□□ -1.43
FNDC3B-209ENST00000478016 NLRP7Q8WX94 980 aa6.11□□□□□ -1.43
FNDC3B-209ENST00000478016 WNT2BQ93097 391 aa6.11□□□□□ -1.43
FNDC3B-209ENST00000478016 LRCH3Q96II8 777 aa6.11□□□□□ -1.43
FNDC3B-209ENST00000478016 MYT1LQ9UL68 1186 aa6.11□□□□□ -1.43
FNDC3B-209ENST00000478016 SWT1Q5T5J6 900 aaKnown RBP6.1□□□□□ -1.43
FNDC3B-209ENST00000478016 SAMD7Q7Z3H4 446 aa6.1□□□□□ -1.43
FNDC3B-209ENST00000478016 GPCPD1Q9NPB8 672 aa6.1□□□□□ -1.43
FNDC3B-209ENST00000478016 SLF2Q8IX21 1173 aa6.09□□□□□ -1.43
FNDC3B-209ENST00000478016 KCTD12Q96CX2 325 aaKnown RBP6.09□□□□□ -1.43
FNDC3B-209ENST00000478016 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.09□□□□□ -1.43
FNDC3B-209ENST00000478016 SOWAHBA6NEL2 793 aa6.08□□□□□ -1.44
FNDC3B-209ENST00000478016 SULF1Q8IWU6 871 aa6.08□□□□□ -1.44
FNDC3B-209ENST00000478016 PARP9Q8IXQ6 854 aa6.08□□□□□ -1.44
FNDC3B-209ENST00000478016 TMUB1Q9BVT8 246 aa6.08□□□□□ -1.44
FNDC3B-209ENST00000478016 RNF40O75150 1001 aa6.07□□□□□ -1.44
FNDC3B-209ENST00000478016 RSPH4AQ5TD94 716 aa6.07□□□□□ -1.44
FNDC3B-209ENST00000478016 THSD4Q6ZMP0 1018 aa6.07□□□□□ -1.44
FNDC3B-209ENST00000478016 NECTIN2Q92692 538 aa6.07□□□□□ -1.44
FNDC3B-209ENST00000478016 RNF166Q96A37 237 aaPredicted RBP6.07□□□□□ -1.44
FNDC3B-209ENST00000478016 BCAMP50895 628 aa6.06□□□□□ -1.44
FNDC3B-209ENST00000478016 NEUROD2Q15784 382 aa6.06□□□□□ -1.44
FNDC3B-209ENST00000478016 GIGYF2Q6Y7W6 1299 aaKnown RBP6.06□□□□□ -1.44
FNDC3B-209ENST00000478016 REPIN1Q9BWE0 567 aaKnown RBP6.06□□□□□ -1.44
FNDC3B-209ENST00000478016 FAM217BQ9NTX9 383 aaPredicted RBP6.06□□□□□ -1.44
FNDC3B-209ENST00000478016 DDX11L8A8MPP1 907 aa6.05□□□□□ -1.44
FNDC3B-209ENST00000478016 BRPF1P55201 1214 aaPredicted RBP6.05□□□□□ -1.44
FNDC3B-209ENST00000478016 KDM4CQ9H3R0 1056 aa6.05□□□□□ -1.44
FNDC3B-209ENST00000478016 GPBP1L1Q9HC44 474 aaPredicted RBP6.05□□□□□ -1.44
FNDC3B-209ENST00000478016 TSR3Q9UJK0 312 aaKnown RBP6.05□□□□□ -1.44
FNDC3B-209ENST00000478016 HPS5Q9UPZ3 1129 aa6.05□□□□□ -1.44
FNDC3B-209ENST00000478016 SSTR3P32745 418 aaPredicted RBP6.04□□□□□ -1.44
FNDC3B-209ENST00000478016 PPP4CP60510 307 aa6.04□□□□□ -1.44
FNDC3B-209ENST00000478016 MMRN1Q13201 1228 aa6.04□□□□□ -1.44
FNDC3B-209ENST00000478016 RDH13Q8NBN7 331 aa6.04□□□□□ -1.44
FNDC3B-209ENST00000478016 SLC10A3P09131 477 aa6.03□□□□□ -1.44
FNDC3B-209ENST00000478016 CFHP08603 1231 aa6.02□□□□□ -1.45
FNDC3B-209ENST00000478016 MS4A1P11836 297 aa6.02□□□□□ -1.45
FNDC3B-209ENST00000478016 CD46P15529 392 aa6.02□□□□□ -1.45
FNDC3B-209ENST00000478016 NYAP1Q6ZVC0 841 aa6.02□□□□□ -1.45
FNDC3B-209ENST00000478016 PRR14Q9BWN1 585 aa6.02□□□□□ -1.45
FNDC3B-209ENST00000478016 PLSCR2Q9NRY7 297 aa6.02□□□□□ -1.45
FNDC3B-209ENST00000478016 WBP1LQ9NX94 342 aa6.02□□□□□ -1.45
FNDC3B-209ENST00000478016 HCSTQ9UBK5 93 aa6.02□□□□□ -1.45
FNDC3B-209ENST00000478016 PTPN5P54829 565 aa6.01□□□□□ -1.45
FNDC3B-209ENST00000478016 KMT5BQ4FZB7 885 aa6.01□□□□□ -1.45
FNDC3B-209ENST00000478016 BEGAINQ9BUH8 593 aa6.01□□□□□ -1.45
FNDC3B-209ENST00000478016 TIMELESSQ9UNS1 1208 aa6.01□□□□□ -1.45
FNDC3B-209ENST00000478016 GCGRP47871 477 aa6□□□□□ -1.45
FNDC3B-209ENST00000478016 DDRGK1Q96HY6 314 aa6□□□□□ -1.45
FNDC3B-209ENST00000478016 HOMEZQ8IX15 550 aa5.99□□□□□ -1.45
FNDC3B-209ENST00000478016 ACTN4O43707 911 aaKnown RBP5.98□□□□□ -1.45
FNDC3B-209ENST00000478016 KDM4AO75164 1064 aa5.98□□□□□ -1.45
FNDC3B-209ENST00000478016 RANGAP1P46060 587 aaPredicted RBP5.98□□□□□ -1.45
FNDC3B-209ENST00000478016 APLP1P51693 650 aa5.98□□□□□ -1.45
FNDC3B-209ENST00000478016 NUTM1Q86Y26 1132 aa5.98□□□□□ -1.45
FNDC3B-209ENST00000478016 FAM117AQ9C073 453 aa5.98□□□□□ -1.45
FNDC3B-209ENST00000478016 USP46P62068 366 aa5.97□□□□□ -1.45
FNDC3B-209ENST00000478016 DIXDC1Q155Q3 683 aa5.97□□□□□ -1.45
FNDC3B-209ENST00000478016 GRIPAP1Q4V328 841 aa5.97□□□□□ -1.45
FNDC3B-209ENST00000478016 FUT2Q10981 343 aa5.96□□□□□ -1.46
FNDC3B-209ENST00000478016 SPIRE2Q8WWL2 714 aa5.96□□□□□ -1.46
FNDC3B-209ENST00000478016 TBC1D2Q9BYX2 928 aa5.96□□□□□ -1.46
FNDC3B-209ENST00000478016 PLEKHG3A1L390 1219 aa5.95□□□□□ -1.46
FNDC3B-209ENST00000478016 ATP6V1AP38606 617 aa5.95□□□□□ -1.46
FNDC3B-209ENST00000478016 IL27Q8NEV9 243 aa5.95□□□□□ -1.46
FNDC3B-209ENST00000478016 RSPH6AQ9H0K4 717 aa5.95□□□□□ -1.46
FNDC3B-209ENST00000478016 PCDHB3Q9Y5E6 796 aa5.95□□□□□ -1.46
FNDC3B-209ENST00000478016 HOXA2O43364 376 aa5.94□□□□□ -1.46
FNDC3B-209ENST00000478016 MORN1Q5T089 497 aa5.93□□□□□ -1.46
FNDC3B-209ENST00000478016 NR1I2O75469 434 aa5.92□□□□□ -1.46
FNDC3B-209ENST00000478016 GJA5P36382 358 aa5.92□□□□□ -1.46
FNDC3B-209ENST00000478016 COPS2P61201 443 aa5.92□□□□□ -1.46
FNDC3B-209ENST00000478016 PUS10Q3MIT2 529 aaKnown RBP5.92□□□□□ -1.46
FNDC3B-209ENST00000478016 SH3D19Q5HYK7 790 aa5.92□□□□□ -1.46
FNDC3B-209ENST00000478016 MYSM1Q5VVJ2 828 aa5.92□□□□□ -1.46
FNDC3B-209ENST00000478016 BLOC1S3Q6QNY0 202 aa5.92□□□□□ -1.46
FNDC3B-209ENST00000478016 MTRQ99707 1265 aa5.92□□□□□ -1.46
FNDC3B-209ENST00000478016 MOXD2PA6NHM9 499 aa5.91□□□□□ -1.46
FNDC3B-209ENST00000478016 SPTLC1O15269 473 aa5.91□□□□□ -1.46
FNDC3B-209ENST00000478016 TJAP1Q5JTD0 557 aa5.91□□□□□ -1.46
FNDC3B-209ENST00000478016 RSBN1LQ6PCB5 846 aaPredicted RBP5.91□□□□□ -1.46
FNDC3B-209ENST00000478016 IL21Q9HBE4 155 aa5.91□□□□□ -1.46
FNDC3B-209ENST00000478016 GOPCQ9HD26 462 aa5.91□□□□□ -1.46
FNDC3B-209ENST00000478016 FDX1P10109 184 aa5.9□□□□□ -1.46
FNDC3B-209ENST00000478016 NDUFV2P19404 249 aa5.9□□□□□ -1.46
FNDC3B-209ENST00000478016 SKIV2LQ15477 1246 aaKnown RBP5.9□□□□□ -1.46
FNDC3B-209ENST00000478016 Q3C1V9 767 aa5.9□□□□□ -1.46
FNDC3B-209ENST00000478016 RIC3Q7Z5B4 369 aa5.9□□□□□ -1.46
FNDC3B-209ENST00000478016 SCUBE3Q8IX30 993 aa5.9□□□□□ -1.46
FNDC3B-209ENST00000478016 SLC27A5Q9Y2P5 690 aa5.9□□□□□ -1.46
FNDC3B-209ENST00000478016 ITGBL1O95965 494 aaPredicted RBP5.89□□□□□ -1.47
FNDC3B-209ENST00000478016 CLK2P49760 499 aaKnown RBP5.89□□□□□ -1.47
FNDC3B-209ENST00000478016 GUCA2AQ02747 115 aa5.89□□□□□ -1.47
FNDC3B-209ENST00000478016 KCNC4Q03721 635 aa5.89□□□□□ -1.47
FNDC3B-209ENST00000478016 HLA-CQ95604 372 aa5.89□□□□□ -1.47
FNDC3B-209ENST00000478016 POLR3EQ9NVU0 708 aa5.89□□□□□ -1.47
FNDC3B-209ENST00000478016 SALL2Q9Y467 1007 aaPredicted RBP5.89□□□□□ -1.47
FNDC3B-209ENST00000478016 ZPR1O75312 459 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms