RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 PNMA3Q9UL41 463 aa4.68□□□□□ -1.66
RPL39P34-201ENST00000477141 C3orf80F5H4A9 247 aa4.67□□□□□ -1.66
RPL39P34-201ENST00000477141 MAP3K7O43318 606 aa4.67□□□□□ -1.66
RPL39P34-201ENST00000477141 PRSS12P56730 875 aa4.67□□□□□ -1.66
RPL39P34-201ENST00000477141 PRR14Q9BWN1 585 aa4.67□□□□□ -1.66
RPL39P34-201ENST00000477141 PPEF1O14829 653 aaPredicted RBP4.66□□□□□ -1.66
RPL39P34-201ENST00000477141 TLL1O43897 1013 aa4.66□□□□□ -1.66
RPL39P34-201ENST00000477141 SLF2Q8IX21 1173 aa4.66□□□□□ -1.66
RPL39P34-201ENST00000477141 ZSCAN1Q8NBB4 408 aa4.66□□□□□ -1.66
RPL39P34-201ENST00000477141 CERKQ8TCT0 537 aa4.66□□□□□ -1.66
RPL39P34-201ENST00000477141 DNAJC5Q9H3Z4 198 aa4.66□□□□□ -1.66
RPL39P34-201ENST00000477141 PKD2L1Q9P0L9 805 aa4.66□□□□□ -1.66
RPL39P34-201ENST00000477141 PCDHB3Q9Y5E6 796 aa4.66□□□□□ -1.66
RPL39P34-201ENST00000477141 S1PR4O95977 384 aa4.65□□□□□ -1.67
RPL39P34-201ENST00000477141 LORP23490 312 aaPredicted RBP4.65□□□□□ -1.67
RPL39P34-201ENST00000477141 NBR1Q14596 966 aa4.65□□□□□ -1.67
RPL39P34-201ENST00000477141 NKX1-1Q15270 411 aaPredicted RBP4.65□□□□□ -1.67
RPL39P34-201ENST00000477141 DDX12PQ92771 950 aa4.65□□□□□ -1.67
RPL39P34-201ENST00000477141 FOXC1Q12948 553 aa4.64□□□□□ -1.67
RPL39P34-201ENST00000477141 BLOC1S3Q6QNY0 202 aa4.64□□□□□ -1.67
RPL39P34-201ENST00000477141 TOR4AQ9NXH8 423 aa4.64□□□□□ -1.67
RPL39P34-201ENST00000477141 SNRPBP14678 240 aaKnown RBP4.63□□□□□ -1.67
RPL39P34-201ENST00000477141 SWT1Q5T5J6 900 aaKnown RBP4.63□□□□□ -1.67
RPL39P34-201ENST00000477141 NUDT18Q6ZVK8 323 aa4.63□□□□□ -1.67
RPL39P34-201ENST00000477141 TRIM47Q96LD4 638 aa4.63□□□□□ -1.67
RPL39P34-201ENST00000477141 DPYSL4O14531 572 aa4.62□□□□□ -1.67
RPL39P34-201ENST00000477141 SLC4A3P48751 1232 aa4.62□□□□□ -1.67
RPL39P34-201ENST00000477141 PLA2G2CQ5R387 149 aa4.62□□□□□ -1.67
RPL39P34-201ENST00000477141 SLC16A10Q8TF71 515 aa4.62□□□□□ -1.67
RPL39P34-201ENST00000477141 SENP2Q9HC62 589 aa4.62□□□□□ -1.67
RPL39P34-201ENST00000477141 ATP13A2Q9NQ11 1180 aa4.62□□□□□ -1.67
RPL39P34-201ENST00000477141 RBM27Q9P2N5 1060 aaKnown RBP4.62□□□□□ -1.67
RPL39P34-201ENST00000477141 CAMK2BQ13554 666 aa4.61□□□□□ -1.67
RPL39P34-201ENST00000477141 CYP4X1Q8N118 509 aa4.61□□□□□ -1.67
RPL39P34-201ENST00000477141 ADH1BP00325 375 aa4.6□□□□□ -1.67
RPL39P34-201ENST00000477141 CHGAP10645 457 aaKnown RBP4.6□□□□□ -1.67
RPL39P34-201ENST00000477141 GMPRP36959 345 aa4.6□□□□□ -1.67
RPL39P34-201ENST00000477141 KIFC2Q96AC6 838 aa4.59□□□□□ -1.67
RPL39P34-201ENST00000477141 IRF7Q92985 503 aa4.58□□□□□ -1.68
RPL39P34-201ENST00000477141 SLC6A16Q9GZN6 736 aa4.58□□□□□ -1.68
RPL39P34-201ENST00000477141 RPIAP49247 311 aa4.57□□□□□ -1.68
RPL39P34-201ENST00000477141 NPAS3Q8IXF0 933 aa4.57□□□□□ -1.68
RPL39P34-201ENST00000477141 KCTD17Q8N5Z5 321 aa4.57□□□□□ -1.68
RPL39P34-201ENST00000477141 KCNMA1Q12791 1236 aa4.56□□□□□ -1.68
RPL39P34-201ENST00000477141 PDIA6Q15084 440 aa4.56□□□□□ -1.68
RPL39P34-201ENST00000477141 NXF1Q9UBU9 619 aaKnown RBP4.56□□□□□ -1.68
RPL39P34-201ENST00000477141 TTC24A2A3L6 582 aaPredicted RBP4.55□□□□□ -1.68
RPL39P34-201ENST00000477141 ACTN4O43707 911 aaKnown RBP4.55□□□□□ -1.68
RPL39P34-201ENST00000477141 KMT5BQ4FZB7 885 aa4.55□□□□□ -1.68
RPL39P34-201ENST00000477141 TTC13Q8NBP0 860 aa4.55□□□□□ -1.68
RPL39P34-201ENST00000477141 NR1I2O75469 434 aa4.53□□□□□ -1.68
RPL39P34-201ENST00000477141 CD2BP2O95400 341 aaKnown RBP4.53□□□□□ -1.68
RPL39P34-201ENST00000477141 SMPD1P17405 629 aa4.53□□□□□ -1.68
RPL39P34-201ENST00000477141 PRIM1P49642 420 aaKnown RBP4.53□□□□□ -1.68
RPL39P34-201ENST00000477141 GSK3AP49840 483 aa4.53□□□□□ -1.68
RPL39P34-201ENST00000477141 CDHR5Q9HBB8 845 aa4.53□□□□□ -1.68
RPL39P34-201ENST00000477141 GTPBP6O43824 516 aaPredicted RBP4.52□□□□□ -1.69
RPL39P34-201ENST00000477141 XP32Q5T750 250 aa4.52□□□□□ -1.69
RPL39P34-201ENST00000477141 SPDYE16A6NNV3 312 aaPredicted RBP4.51□□□□□ -1.69
RPL39P34-201ENST00000477141 H3BM21 787 aa4.51□□□□□ -1.69
RPL39P34-201ENST00000477141 PADI6Q6TGC4 694 aa4.51□□□□□ -1.69
RPL39P34-201ENST00000477141 EYA1Q99502 592 aa4.51□□□□□ -1.69
RPL39P34-201ENST00000477141 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
RPL39P34-201ENST00000477141 ERBB4Q15303 1308 aa4.5□□□□□ -1.69
RPL39P34-201ENST00000477141 CFHP08603 1231 aa4.5□□□□□ -1.69
RPL39P34-201ENST00000477141 CADPS2Q86UW7 1296 aa4.5□□□□□ -1.69
RPL39P34-201ENST00000477141 TMEM151AQ8N4L1 468 aa4.5□□□□□ -1.69
RPL39P34-201ENST00000477141 SNIP1Q8TAD8 396 aaKnown RBP4.5□□□□□ -1.69
RPL39P34-201ENST00000477141 FCF1Q9Y324 198 aaKnown RBP4.5□□□□□ -1.69
RPL39P34-201ENST00000477141 WNT7AO00755 349 aa4.49□□□□□ -1.69
RPL39P34-201ENST00000477141 SPSB2Q99619 263 aa4.49□□□□□ -1.69
RPL39P34-201ENST00000477141 GDF11O95390 407 aa4.48□□□□□ -1.69
RPL39P34-201ENST00000477141 DNAJB2P25686 324 aa4.48□□□□□ -1.69
RPL39P34-201ENST00000477141 GRXCR2A6NFK2 248 aa4.47□□□□□ -1.69
RPL39P34-201ENST00000477141 J3QL48 77 aa4.47□□□□□ -1.69
RPL39P34-201ENST00000477141 RNF225M0QZC1 329 aaPredicted RBP4.47□□□□□ -1.69
RPL39P34-201ENST00000477141 VEGFBP49765 207 aa4.47□□□□□ -1.69
RPL39P34-201ENST00000477141 SCUBE3Q8IX30 993 aa4.47□□□□□ -1.69
RPL39P34-201ENST00000477141 TMEM134Q9H6X4 195 aa4.47□□□□□ -1.69
RPL39P34-201ENST00000477141 RASSF7Q02833 373 aa4.46□□□□□ -1.7
RPL39P34-201ENST00000477141 HPS1Q92902 700 aa4.46□□□□□ -1.7
RPL39P34-201ENST00000477141 ZBTB24O43167 697 aaPredicted RBP4.45□□□□□ -1.7
RPL39P34-201ENST00000477141 OSBPP22059 807 aa4.45□□□□□ -1.7
RPL39P34-201ENST00000477141 NPDC1Q9NQX5 325 aaPredicted RBP4.45□□□□□ -1.7
RPL39P34-201ENST00000477141 IGHA1P01876 353 aa4.44□□□□□ -1.7
RPL39P34-201ENST00000477141 VSIG8P0DPA2 414 aa4.44□□□□□ -1.7
RPL39P34-201ENST00000477141 MRGPRX2Q96LB1 330 aa4.44□□□□□ -1.7
RPL39P34-201ENST00000477141 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
RPL39P34-201ENST00000477141 SLC10A3P09131 477 aa4.43□□□□□ -1.7
RPL39P34-201ENST00000477141 REPIN1Q9BWE0 567 aaKnown RBP4.43□□□□□ -1.7
RPL39P34-201ENST00000477141 TRIM32Q13049 653 aa4.42□□□□□ -1.7
RPL39P34-201ENST00000477141 TRIM46Q7Z4K8 759 aa4.42□□□□□ -1.7
RPL39P34-201ENST00000477141 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
RPL39P34-201ENST00000477141 DNMT3AQ9Y6K1 912 aaPredicted RBP4.42□□□□□ -1.7
RPL39P34-201ENST00000477141 BMP1P13497 986 aa4.41□□□□□ -1.7
RPL39P34-201ENST00000477141 PUS10Q3MIT2 529 aaKnown RBP4.41□□□□□ -1.7
RPL39P34-201ENST00000477141 GPAT2Q6NUI2 795 aa4.41□□□□□ -1.7
RPL39P34-201ENST00000477141 RBM46Q8TBY0 533 aaKnown RBP4.41□□□□□ -1.7
RPL39P34-201ENST00000477141 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
RPL39P34-201ENST00000477141 THAP11Q96EK4 314 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms