RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 PROSER2Q86WR7 435 aaPredicted RBP23.51■■□□□ 1.35
HOXB3-204ENST00000465120 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
HOXB3-204ENST00000465120 RIMS2Q9UQ26 1411 aa23.49■■□□□ 1.35
HOXB3-204ENST00000465120 MYO5BQ9ULV0 1848 aa23.48■■□□□ 1.35
HOXB3-204ENST00000465120 E9PCH4 1651 aa23.48■■□□□ 1.35
HOXB3-204ENST00000465120 SOCS7O14512 581 aa23.47■■□□□ 1.35
HOXB3-204ENST00000465120 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
HOXB3-204ENST00000465120 TMEM94Q12767 1356 aa23.47■■□□□ 1.35
HOXB3-204ENST00000465120 IQGAP3Q86VI3 1631 aa23.47■■□□□ 1.35
HOXB3-204ENST00000465120 NUTM2DQ5VT03 806 aaPredicted RBP23.46■■□□□ 1.35
HOXB3-204ENST00000465120 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.46■■□□□ 1.35
HOXB3-204ENST00000465120 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
HOXB3-204ENST00000465120 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
HOXB3-204ENST00000465120 ZFYVE9O95405 1425 aa23.43■■□□□ 1.34
HOXB3-204ENST00000465120 PLEKHG1Q9ULL1 1385 aa23.43■■□□□ 1.34
HOXB3-204ENST00000465120 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
HOXB3-204ENST00000465120 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
HOXB3-204ENST00000465120 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
HOXB3-204ENST00000465120 TBX22Q9Y458 520 aa23.37■■□□□ 1.33
HOXB3-204ENST00000465120 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
HOXB3-204ENST00000465120 MSH6P52701 1360 aa23.36■■□□□ 1.33
HOXB3-204ENST00000465120 ZNF326Q5BKZ1 582 aaKnown RBP23.35■■□□□ 1.33
HOXB3-204ENST00000465120 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
HOXB3-204ENST00000465120 C14orf37Q86TY3 774 aa23.34■■□□□ 1.33
HOXB3-204ENST00000465120 TRIM52Q96A61 297 aa23.33■■□□□ 1.33
HOXB3-204ENST00000465120 CHD2O14647 1828 aaKnown RBP23.33■■□□□ 1.32
HOXB3-204ENST00000465120 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.32
HOXB3-204ENST00000465120 SPHKAPQ2M3C7 1700 aa23.3■■□□□ 1.32
HOXB3-204ENST00000465120 NAIPQ13075 1403 aa23.29■■□□□ 1.32
HOXB3-204ENST00000465120 SLAIN2Q9P270 581 aa23.29■■□□□ 1.32
HOXB3-204ENST00000465120 ADAMTS13Q76LX8 1427 aa23.28■■□□□ 1.32
HOXB3-204ENST00000465120 ROBO1Q9Y6N7 1651 aa23.26■■□□□ 1.31
HOXB3-204ENST00000465120 DIP2AQ14689 1571 aa23.26■■□□□ 1.31
HOXB3-204ENST00000465120 AMOTL2Q9Y2J4 779 aa23.25■■□□□ 1.31
HOXB3-204ENST00000465120 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
HOXB3-204ENST00000465120 TRPM2O94759 1503 aa23.23■■□□□ 1.31
HOXB3-204ENST00000465120 ATF3P18847 181 aa23.22■■□□□ 1.31
HOXB3-204ENST00000465120 SLC4A1APQ9BWU0 796 aaKnown RBP23.21■■□□□ 1.31
HOXB3-204ENST00000465120 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
HOXB3-204ENST00000465120 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
HOXB3-204ENST00000465120 C19orf44Q9H6X5 657 aa23.2■■□□□ 1.3
HOXB3-204ENST00000465120 CADPS2Q86UW7 1296 aa23.19■■□□□ 1.3
HOXB3-204ENST00000465120 CLTCL1P53675 1640 aa23.19■■□□□ 1.3
HOXB3-204ENST00000465120 PTPRUQ92729 1446 aa23.16■■□□□ 1.3
HOXB3-204ENST00000465120 KIF1BO60333 1816 aa23.16■■□□□ 1.3
HOXB3-204ENST00000465120 PHLPP1O60346 1717 aa23.15■■□□□ 1.3
HOXB3-204ENST00000465120 SETBP1Q9Y6X0 1596 aa23.14■■□□□ 1.29
HOXB3-204ENST00000465120 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.13■■□□□ 1.29
HOXB3-204ENST00000465120 NRXN3Q9Y4C0 1643 aa23.12■■□□□ 1.29
HOXB3-204ENST00000465120 NEXMIFQ5QGS0 1516 aa23.12■■□□□ 1.29
HOXB3-204ENST00000465120 METP08581 1390 aa23.12■■□□□ 1.29
HOXB3-204ENST00000465120 VGFO15240 615 aaPredicted RBP23.11■■□□□ 1.29
HOXB3-204ENST00000465120 FOXD1Q16676 465 aa23.1■■□□□ 1.29
HOXB3-204ENST00000465120 RGS17Q9UGC6 210 aaPredicted RBP23.1■■□□□ 1.29
HOXB3-204ENST00000465120 JCADQ9P266 1359 aa23.09■■□□□ 1.29
HOXB3-204ENST00000465120 XRN1Q8IZH2 1706 aaKnown RBP23.06■■□□□ 1.28
HOXB3-204ENST00000465120 RPGRIP1LQ68CZ1 1315 aa23.06■■□□□ 1.28
HOXB3-204ENST00000465120 BRINP3Q76B58 766 aa23.04■■□□□ 1.28
HOXB3-204ENST00000465120 DCCP43146 1447 aa23.02■■□□□ 1.28
HOXB3-204ENST00000465120 COL16A1Q07092 1604 aaPredicted RBP23.02■■□□□ 1.28
HOXB3-204ENST00000465120 MEX3CQ5U5Q3 659 aaKnown RBP23.02■■□□□ 1.28
HOXB3-204ENST00000465120 MPHOSPH9Q99550 1183 aa23.02■■□□□ 1.28
HOXB3-204ENST00000465120 RGL3Q3MIN7 710 aa23.01■■□□□ 1.27
HOXB3-204ENST00000465120 POTEAQ6S8J7 498 aa23.01■■□□□ 1.27
HOXB3-204ENST00000465120 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
HOXB3-204ENST00000465120 AHDC1Q5TGY3 1603 aaPredicted RBP22.98■■□□□ 1.27
HOXB3-204ENST00000465120 SPATA31A6Q5VVP1 1343 aa22.98■■□□□ 1.27
HOXB3-204ENST00000465120 ADGRL3Q9HAR2 1447 aa22.98■■□□□ 1.27
HOXB3-204ENST00000465120 MST1RQ04912 1400 aa22.97■■□□□ 1.27
HOXB3-204ENST00000465120 NUTM2BA6NNL0 878 aaPredicted RBP22.95■■□□□ 1.26
HOXB3-204ENST00000465120 NUTM2EB1AL46 878 aaPredicted RBP22.95■■□□□ 1.26
HOXB3-204ENST00000465120 PPLO60437 1756 aa22.95■■□□□ 1.26
HOXB3-204ENST00000465120 NUTM2AQ8IVF1 878 aaPredicted RBP22.95■■□□□ 1.26
HOXB3-204ENST00000465120 ASXL1Q8IXJ9 1541 aa22.94■■□□□ 1.26
HOXB3-204ENST00000465120 ROBO2Q9HCK4 1378 aa22.93■■□□□ 1.26
HOXB3-204ENST00000465120 NALCNQ8IZF0 1738 aa22.93■■□□□ 1.26
HOXB3-204ENST00000465120 DDX17Q92841 729 aaKnown RBP22.92■■□□□ 1.26
HOXB3-204ENST00000465120 PTCH1Q13635 1447 aa22.91■■□□□ 1.26
HOXB3-204ENST00000465120 ADGRF5Q8IZF2 1346 aa22.91■■□□□ 1.26
HOXB3-204ENST00000465120 ACIN1Q9UKV3 1341 aaKnown RBP22.91■■□□□ 1.26
HOXB3-204ENST00000465120 LRRC59Q96AG4 307 aaKnown RBP22.91■■□□□ 1.26
HOXB3-204ENST00000465120 SETD1AO15047 1707 aaKnown RBP22.91■■□□□ 1.26
HOXB3-204ENST00000465120 SETD5Q9C0A6 1442 aa22.91■■□□□ 1.26
HOXB3-204ENST00000465120 LRP6O75581 1613 aa22.9■■□□□ 1.26
HOXB3-204ENST00000465120 STK26Q9P289 416 aa22.9■■□□□ 1.26
HOXB3-204ENST00000465120 SHPRHQ149N8 1683 aa22.9■■□□□ 1.26
HOXB3-204ENST00000465120 ZNF772Q68DY9 489 aaPredicted RBP22.87■■□□□ 1.25
HOXB3-204ENST00000465120 ANKRD30BQ9BXX2 1392 aa22.87■■□□□ 1.25
HOXB3-204ENST00000465120 C1orf167Q5SNV9 1468 aa22.86■■□□□ 1.25
HOXB3-204ENST00000465120 SPATA31E1Q6ZUB1 1445 aa22.86■■□□□ 1.25
HOXB3-204ENST00000465120 ORAI2Q96SN7 254 aa22.86■■□□□ 1.25
HOXB3-204ENST00000465120 NHSL1Q5SYE7 1610 aa22.86■■□□□ 1.25
HOXB3-204ENST00000465120 TMEM132EQ6IEE7 984 aa22.83■■□□□ 1.25
HOXB3-204ENST00000465120 RAB3GAP2Q9H2M9 1393 aa22.81■■□□□ 1.24
HOXB3-204ENST00000465120 WAPLQ7Z5K2 1190 aa22.81■■□□□ 1.24
HOXB3-204ENST00000465120 PRAG1Q86YV5 1406 aa22.81■■□□□ 1.24
HOXB3-204ENST00000465120 ESCO1Q5FWF5 840 aa22.8■■□□□ 1.24
HOXB3-204ENST00000465120 IFT172Q9UG01 1749 aa22.79■■□□□ 1.24
HOXB3-204ENST00000465120 PNPLA6Q8IY17 1366 aa22.78■■□□□ 1.24
HOXB3-204ENST00000465120 NUTM2FA1L443 756 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms