RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
KPNA1-202ENST00000464940 ZNF516Q92618 1163 aa11.53□□□□□ -0.56
KPNA1-202ENST00000464940 RNF40O75150 1001 aa11.52□□□□□ -0.57
KPNA1-202ENST00000464940 DAXXQ9UER7 740 aaPredicted RBP11.52□□□□□ -0.57
KPNA1-202ENST00000464940 APLP1P51693 650 aa11.5□□□□□ -0.57
KPNA1-202ENST00000464940 NUDT18Q6ZVK8 323 aa11.5□□□□□ -0.57
KPNA1-202ENST00000464940 NECTIN2Q92692 538 aa11.5□□□□□ -0.57
KPNA1-202ENST00000464940 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
KPNA1-202ENST00000464940 RBM26Q5T8P6 1007 aaKnown RBP11.48□□□□□ -0.57
KPNA1-202ENST00000464940 HOMEZQ8IX15 550 aa11.48□□□□□ -0.57
KPNA1-202ENST00000464940 GGCXP38435 758 aa11.47□□□□□ -0.57
KPNA1-202ENST00000464940 CDHR5Q9HBB8 845 aa11.47□□□□□ -0.57
KPNA1-202ENST00000464940 PDZRN3Q9UPQ7 1066 aa11.47□□□□□ -0.57
KPNA1-202ENST00000464940 NKX2-3Q8TAU0 364 aa11.46□□□□□ -0.57
KPNA1-202ENST00000464940 BRPF1P55201 1214 aaPredicted RBP11.45□□□□□ -0.58
KPNA1-202ENST00000464940 ZNF787Q6DD87 383 aa11.44□□□□□ -0.58
KPNA1-202ENST00000464940 NUTM2FA1L443 756 aa11.43□□□□□ -0.58
KPNA1-202ENST00000464940 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
KPNA1-202ENST00000464940 TMUB1Q9BVT8 246 aa11.43□□□□□ -0.58
KPNA1-202ENST00000464940 COPS2P61201 443 aa11.42□□□□□ -0.58
KPNA1-202ENST00000464940 SWT1Q5T5J6 900 aaKnown RBP11.42□□□□□ -0.58
KPNA1-202ENST00000464940 TTC13Q8NBP0 860 aa11.42□□□□□ -0.58
KPNA1-202ENST00000464940 NPDC1Q9NQX5 325 aaPredicted RBP11.42□□□□□ -0.58
KPNA1-202ENST00000464940 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
KPNA1-202ENST00000464940 PTGDRQ13258 359 aa11.39□□□□□ -0.59
KPNA1-202ENST00000464940 ZPR1O75312 459 aa11.38□□□□□ -0.59
KPNA1-202ENST00000464940 SLC4A3P48751 1232 aa11.38□□□□□ -0.59
KPNA1-202ENST00000464940 PADI6Q6TGC4 694 aa11.38□□□□□ -0.59
KPNA1-202ENST00000464940 GPIHBP1Q8IV16 184 aa11.38□□□□□ -0.59
KPNA1-202ENST00000464940 FCHSD2O94868 740 aa11.36□□□□□ -0.59
KPNA1-202ENST00000464940 NEUROD2Q15784 382 aa11.36□□□□□ -0.59
KPNA1-202ENST00000464940 PRR14Q9BWN1 585 aa11.36□□□□□ -0.59
KPNA1-202ENST00000464940 GPR37O15354 613 aa11.34□□□□□ -0.59
KPNA1-202ENST00000464940 HIC1Q14526 733 aa11.33□□□□□ -0.6
KPNA1-202ENST00000464940 ZNF775Q96BV0 537 aaPredicted RBP11.33□□□□□ -0.6
KPNA1-202ENST00000464940 EYA1Q99502 592 aa11.33□□□□□ -0.6
KPNA1-202ENST00000464940 SLC24A3Q9HC58 644 aa11.32□□□□□ -0.6
KPNA1-202ENST00000464940 PCDHB3Q9Y5E6 796 aa11.32□□□□□ -0.6
KPNA1-202ENST00000464940 SLC19A1P41440 591 aa11.31□□□□□ -0.6
KPNA1-202ENST00000464940 TRIM67Q6ZTA4 783 aa11.31□□□□□ -0.6
KPNA1-202ENST00000464940 RNF223E7ERA6 249 aa11.3□□□□□ -0.6
KPNA1-202ENST00000464940 GNPATO15228 680 aa11.3□□□□□ -0.6
KPNA1-202ENST00000464940 ZMYND10O75800 440 aa11.28□□□□□ -0.6
KPNA1-202ENST00000464940 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
KPNA1-202ENST00000464940 PKDCCQ504Y2 493 aa11.27□□□□□ -0.61
KPNA1-202ENST00000464940 SPRYD7Q5W111 196 aa11.27□□□□□ -0.61
KPNA1-202ENST00000464940 EMID1Q96A84 441 aaPredicted RBP11.27□□□□□ -0.61
KPNA1-202ENST00000464940 RB1CC1Q8TDY2 1594 aa11.26□□□□□ -0.61
KPNA1-202ENST00000464940 DGAT1O75907 488 aa11.26□□□□□ -0.61
KPNA1-202ENST00000464940 FECHP22830 423 aa11.26□□□□□ -0.61
KPNA1-202ENST00000464940 BARGINQ6ZT62 677 aa11.26□□□□□ -0.61
KPNA1-202ENST00000464940 ZNF598Q86UK7 904 aaKnown RBP11.25□□□□□ -0.61
KPNA1-202ENST00000464940 PRR20EP86478 221 aa11.24□□□□□ -0.61
KPNA1-202ENST00000464940 PRR20CP86479 221 aa11.24□□□□□ -0.61
KPNA1-202ENST00000464940 PRR20DP86480 221 aa11.24□□□□□ -0.61
KPNA1-202ENST00000464940 PRR20BP86481 221 aa11.24□□□□□ -0.61
KPNA1-202ENST00000464940 PRR20AP86496 221 aa11.24□□□□□ -0.61
KPNA1-202ENST00000464940 MYT1Q01538 1121 aa11.24□□□□□ -0.61
KPNA1-202ENST00000464940 ANKLE1Q8NAG6 615 aa11.24□□□□□ -0.61
KPNA1-202ENST00000464940 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
KPNA1-202ENST00000464940 DNAJB2P25686 324 aa11.23□□□□□ -0.61
KPNA1-202ENST00000464940 TLL1O43897 1013 aa11.22□□□□□ -0.61
KPNA1-202ENST00000464940 MINK1Q8N4C8 1332 aaPredicted RBP11.22□□□□□ -0.61
KPNA1-202ENST00000464940 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
KPNA1-202ENST00000464940 S1PR4O95977 384 aa11.2□□□□□ -0.62
KPNA1-202ENST00000464940 KMT5BQ4FZB7 885 aa11.2□□□□□ -0.62
KPNA1-202ENST00000464940 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
KPNA1-202ENST00000464940 PPEF1O14829 653 aaPredicted RBP11.19□□□□□ -0.62
KPNA1-202ENST00000464940 IRF6O14896 467 aa11.19□□□□□ -0.62
KPNA1-202ENST00000464940 MAP2K5Q13163 448 aa11.19□□□□□ -0.62
KPNA1-202ENST00000464940 KRI1Q8N9T8 703 aaKnown RBP11.19□□□□□ -0.62
KPNA1-202ENST00000464940 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
KPNA1-202ENST00000464940 OATP04181 439 aa11.18□□□□□ -0.62
KPNA1-202ENST00000464940 ZNF697Q5TEC3 545 aa11.18□□□□□ -0.62
KPNA1-202ENST00000464940 LIAT1Q6ZQX7 453 aa11.18□□□□□ -0.62
KPNA1-202ENST00000464940 ADGRG1Q9Y653 693 aa11.18□□□□□ -0.62
KPNA1-202ENST00000464940 NACADO15069 1562 aa11.18□□□□□ -0.62
KPNA1-202ENST00000464940 GDF9O60383 454 aa11.16□□□□□ -0.62
KPNA1-202ENST00000464940 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
KPNA1-202ENST00000464940 POTECB2RU33 542 aa11.15□□□□□ -0.62
KPNA1-202ENST00000464940 CFHP08603 1231 aa11.15□□□□□ -0.62
KPNA1-202ENST00000464940 ADH1BP00325 375 aa11.14□□□□□ -0.63
KPNA1-202ENST00000464940 FAM161AQ3B820 660 aa11.14□□□□□ -0.63
KPNA1-202ENST00000464940 RCCD1A6NED2 376 aa11.13□□□□□ -0.63
KPNA1-202ENST00000464940 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
KPNA1-202ENST00000464940 PXYLP1Q8TE99 480 aa11.13□□□□□ -0.63
KPNA1-202ENST00000464940 NR1I2O75469 434 aa11.12□□□□□ -0.63
KPNA1-202ENST00000464940 METTL3Q86U44 580 aaKnown RBP11.11□□□□□ -0.63
KPNA1-202ENST00000464940 AK7Q96M32 723 aa11.11□□□□□ -0.63
KPNA1-202ENST00000464940 SLC6A16Q9GZN6 736 aa11.11□□□□□ -0.63
KPNA1-202ENST00000464940 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
KPNA1-202ENST00000464940 SLC10A3P09131 477 aa11.09□□□□□ -0.63
KPNA1-202ENST00000464940 PLA2G2CQ5R387 149 aa11.08□□□□□ -0.64
KPNA1-202ENST00000464940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.07□□□□□ -0.64
KPNA1-202ENST00000464940 PHOX2BQ99453 314 aa11.07□□□□□ -0.64
KPNA1-202ENST00000464940 AAASQ9NRG9 546 aa11.07□□□□□ -0.64
KPNA1-202ENST00000464940 ST8SIA5O15466 376 aa11.06□□□□□ -0.64
KPNA1-202ENST00000464940 MYO15BQ96JP2 1530 aa11.05□□□□□ -0.64
KPNA1-202ENST00000464940 TRIM66O15016 1216 aa11.05□□□□□ -0.64
KPNA1-202ENST00000464940 TREML4Q6UXN2 200 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms