RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TJAP1Q5JTD0 557 aa11.07□□□□□ -0.64
ITGB1-208ENST00000464001 PXYLP1Q8TE99 480 aa11.07□□□□□ -0.64
ITGB1-208ENST00000464001 PRR14Q9BWN1 585 aa11.07□□□□□ -0.64
ITGB1-208ENST00000464001 IL21Q9HBE4 155 aa11.07□□□□□ -0.64
ITGB1-208ENST00000464001 GPR37O15354 613 aa11.06□□□□□ -0.64
ITGB1-208ENST00000464001 MTRQ99707 1265 aa11.06□□□□□ -0.64
ITGB1-208ENST00000464001 FECHP22830 423 aa11.05□□□□□ -0.64
ITGB1-208ENST00000464001 METTL3Q86U44 580 aaKnown RBP11.03□□□□□ -0.64
ITGB1-208ENST00000464001 KMT5BQ4FZB7 885 aa11□□□□□ -0.65
ITGB1-208ENST00000464001 RSPH4AQ5TD94 716 aa11□□□□□ -0.65
ITGB1-208ENST00000464001 ZNF516Q92618 1163 aa10.99□□□□□ -0.65
ITGB1-208ENST00000464001 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
ITGB1-208ENST00000464001 COPS2P61201 443 aa10.98□□□□□ -0.65
ITGB1-208ENST00000464001 CFHP08603 1231 aa10.96□□□□□ -0.65
ITGB1-208ENST00000464001 DAXXQ9UER7 740 aaPredicted RBP10.96□□□□□ -0.65
ITGB1-208ENST00000464001 ACTN4O43707 911 aaKnown RBP10.95□□□□□ -0.66
ITGB1-208ENST00000464001 SLC10A3P09131 477 aa10.95□□□□□ -0.66
ITGB1-208ENST00000464001 ZPR1O75312 459 aa10.93□□□□□ -0.66
ITGB1-208ENST00000464001 MAP2K5Q13163 448 aa10.92□□□□□ -0.66
ITGB1-208ENST00000464001 BLOC1S3Q6QNY0 202 aa10.92□□□□□ -0.66
ITGB1-208ENST00000464001 PPP1R18Q6NYC8 613 aa10.91□□□□□ -0.66
ITGB1-208ENST00000464001 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.91□□□□□ -0.66
ITGB1-208ENST00000464001 NKX2-3Q8TAU0 364 aa10.91□□□□□ -0.66
ITGB1-208ENST00000464001 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.91□□□□□ -0.66
ITGB1-208ENST00000464001 GGCXP38435 758 aa10.9□□□□□ -0.66
ITGB1-208ENST00000464001 RDH13Q8NBN7 331 aa10.9□□□□□ -0.66
ITGB1-208ENST00000464001 MINK1Q8N4C8 1332 aaPredicted RBP10.89□□□□□ -0.67
ITGB1-208ENST00000464001 DDX11L8A8MPP1 907 aa10.89□□□□□ -0.67
ITGB1-208ENST00000464001 SULF1Q8IWU6 871 aa10.89□□□□□ -0.67
ITGB1-208ENST00000464001 PHOX2BQ99453 314 aa10.89□□□□□ -0.67
ITGB1-208ENST00000464001 IRF6O14896 467 aa10.88□□□□□ -0.67
ITGB1-208ENST00000464001 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
ITGB1-208ENST00000464001 IRX2Q9BZI1 471 aaPredicted RBP10.88□□□□□ -0.67
ITGB1-208ENST00000464001 NR1I2O75469 434 aa10.87□□□□□ -0.67
ITGB1-208ENST00000464001 LMOD2Q6P5Q4 547 aa10.86□□□□□ -0.67
ITGB1-208ENST00000464001 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
ITGB1-208ENST00000464001 GCGRP47871 477 aa10.82□□□□□ -0.68
ITGB1-208ENST00000464001 SCUBE3Q8IX30 993 aa10.82□□□□□ -0.68
ITGB1-208ENST00000464001 PRKD2Q9BZL6 878 aa10.82□□□□□ -0.68
ITGB1-208ENST00000464001 TLL1O43897 1013 aa10.81□□□□□ -0.68
ITGB1-208ENST00000464001 PUS10Q3MIT2 529 aaKnown RBP10.81□□□□□ -0.68
ITGB1-208ENST00000464001 CCDC102AQ96A19 550 aa10.81□□□□□ -0.68
ITGB1-208ENST00000464001 V9GY48 417 aaPredicted RBP10.81□□□□□ -0.68
ITGB1-208ENST00000464001 ATP6V1AP38606 617 aa10.8□□□□□ -0.68
ITGB1-208ENST00000464001 ADH1BP00325 375 aa10.79□□□□□ -0.68
ITGB1-208ENST00000464001 FUT2Q10981 343 aa10.79□□□□□ -0.68
ITGB1-208ENST00000464001 KRI1Q8N9T8 703 aaKnown RBP10.79□□□□□ -0.68
ITGB1-208ENST00000464001 MDM2Q00987 491 aaPredicted RBP10.78□□□□□ -0.68
ITGB1-208ENST00000464001 GRIPAP1Q4V328 841 aa10.77□□□□□ -0.69
ITGB1-208ENST00000464001 MORN1Q5T089 497 aa10.77□□□□□ -0.69
ITGB1-208ENST00000464001 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
ITGB1-208ENST00000464001 CD46P15529 392 aa10.76□□□□□ -0.69
ITGB1-208ENST00000464001 SPSB2Q99619 263 aa10.76□□□□□ -0.69
ITGB1-208ENST00000464001 S1PR4O95977 384 aa10.75□□□□□ -0.69
ITGB1-208ENST00000464001 CLCN1P35523 988 aa10.75□□□□□ -0.69
ITGB1-208ENST00000464001 BARGINQ6ZT62 677 aa10.75□□□□□ -0.69
ITGB1-208ENST00000464001 SLC6A16Q9GZN6 736 aa10.75□□□□□ -0.69
ITGB1-208ENST00000464001 ZMYND10O75800 440 aa10.74□□□□□ -0.69
ITGB1-208ENST00000464001 LAPTM4AQ15012 233 aa10.74□□□□□ -0.69
ITGB1-208ENST00000464001 ANKLE1Q8NAG6 615 aa10.74□□□□□ -0.69
ITGB1-208ENST00000464001 ZC3H15Q8WU90 426 aaKnown RBP10.74□□□□□ -0.69
ITGB1-208ENST00000464001 GPCPD1Q9NPB8 672 aa10.74□□□□□ -0.69
ITGB1-208ENST00000464001 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
ITGB1-208ENST00000464001 SLC27A5Q9Y2P5 690 aa10.72□□□□□ -0.69
ITGB1-208ENST00000464001 SALL2Q9Y467 1007 aaPredicted RBP10.71□□□□□ -0.69
ITGB1-208ENST00000464001 PPEF1O14829 653 aaPredicted RBP10.7□□□□□ -0.7
ITGB1-208ENST00000464001 GFRA3O60609 400 aa10.7□□□□□ -0.7
ITGB1-208ENST00000464001 KDM4AO75164 1064 aa10.7□□□□□ -0.7
ITGB1-208ENST00000464001 SLC19A1P41440 591 aa10.7□□□□□ -0.7
ITGB1-208ENST00000464001 USP46P62068 366 aa10.69□□□□□ -0.7
ITGB1-208ENST00000464001 THAP11Q96EK4 314 aa10.69□□□□□ -0.7
ITGB1-208ENST00000464001 FAM217BQ9NTX9 383 aaPredicted RBP10.69□□□□□ -0.7
ITGB1-208ENST00000464001 Q3C1V9 767 aa10.67□□□□□ -0.7
ITGB1-208ENST00000464001 BRICD5Q6PL45 260 aa10.67□□□□□ -0.7
ITGB1-208ENST00000464001 Q6ZNB5 142 aa10.67□□□□□ -0.7
ITGB1-208ENST00000464001 NRG2O14511 850 aaPredicted RBP10.64□□□□□ -0.71
ITGB1-208ENST00000464001 SPRYD7Q5W111 196 aa10.64□□□□□ -0.71
ITGB1-208ENST00000464001 FAM160A2Q8N612 972 aaPredicted RBP10.64□□□□□ -0.71
ITGB1-208ENST00000464001 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
ITGB1-208ENST00000464001 SSTR3P32745 418 aaPredicted RBP10.63□□□□□ -0.71
ITGB1-208ENST00000464001 TTLL12Q14166 644 aaPredicted RBP10.63□□□□□ -0.71
ITGB1-208ENST00000464001 AMHR2Q16671 573 aa10.63□□□□□ -0.71
ITGB1-208ENST00000464001 RNF19BQ6ZMZ0 732 aa10.63□□□□□ -0.71
ITGB1-208ENST00000464001 LIAT1Q6ZQX7 453 aa10.63□□□□□ -0.71
ITGB1-208ENST00000464001 NUTM1Q86Y26 1132 aa10.63□□□□□ -0.71
ITGB1-208ENST00000464001 PDZRN3Q9UPQ7 1066 aa10.63□□□□□ -0.71
ITGB1-208ENST00000464001 MSS51Q4VC12 460 aa10.62□□□□□ -0.71
ITGB1-208ENST00000464001 ZNF598Q86UK7 904 aaKnown RBP10.62□□□□□ -0.71
ITGB1-208ENST00000464001 REPIN1Q9BWE0 567 aaKnown RBP10.62□□□□□ -0.71
ITGB1-208ENST00000464001 HOXA2O43364 376 aa10.61□□□□□ -0.71
ITGB1-208ENST00000464001 AK7Q96M32 723 aa10.6□□□□□ -0.71
ITGB1-208ENST00000464001 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
ITGB1-208ENST00000464001 PLA2G2CQ5R387 149 aa10.59□□□□□ -0.71
ITGB1-208ENST00000464001 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
ITGB1-208ENST00000464001 USB1Q9BQ65 265 aaKnown RBP10.59□□□□□ -0.71
ITGB1-208ENST00000464001 RPIAP49247 311 aa10.57□□□□□ -0.72
ITGB1-208ENST00000464001 GIGYF2Q6Y7W6 1299 aaKnown RBP10.57□□□□□ -0.72
ITGB1-208ENST00000464001 HLA-CQ95604 372 aa10.57□□□□□ -0.72
ITGB1-208ENST00000464001 PRDM9Q9NQV7 894 aa10.57□□□□□ -0.72
ITGB1-208ENST00000464001 TRIM66O15016 1216 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms