RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 ZFRQ96KR1 1074 aaKnown RBP9.62□□□□□ -0.87
PRPF4B-202ENST00000461612 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
PRPF4B-202ENST00000461612 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
PRPF4B-202ENST00000461612 SULF1Q8IWU6 871 aa9.61□□□□□ -0.87
PRPF4B-202ENST00000461612 REPIN1Q9BWE0 567 aaKnown RBP9.61□□□□□ -0.87
PRPF4B-202ENST00000461612 GPBP1L1Q9HC44 474 aaPredicted RBP9.61□□□□□ -0.87
PRPF4B-202ENST00000461612 RSPH4AQ5TD94 716 aa9.6□□□□□ -0.87
PRPF4B-202ENST00000461612 FAM217BQ9NTX9 383 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-202ENST00000461612 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-202ENST00000461612 SWT1Q5T5J6 900 aaKnown RBP9.59□□□□□ -0.87
PRPF4B-202ENST00000461612 SLF2Q8IX21 1173 aa9.59□□□□□ -0.87
PRPF4B-202ENST00000461612 NLRP7Q8WX94 980 aa9.59□□□□□ -0.87
PRPF4B-202ENST00000461612 SAMD7Q7Z3H4 446 aa9.58□□□□□ -0.88
PRPF4B-202ENST00000461612 NECTIN2Q92692 538 aa9.58□□□□□ -0.88
PRPF4B-202ENST00000461612 ANKK1Q8NFD2 765 aa9.57□□□□□ -0.88
PRPF4B-202ENST00000461612 DDRGK1Q96HY6 314 aa9.57□□□□□ -0.88
PRPF4B-202ENST00000461612 LRCH3Q96II8 777 aa9.56□□□□□ -0.88
PRPF4B-202ENST00000461612 MS4A1P11836 297 aa9.55□□□□□ -0.88
PRPF4B-202ENST00000461612 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
PRPF4B-202ENST00000461612 SOWAHBA6NEL2 793 aa9.54□□□□□ -0.88
PRPF4B-202ENST00000461612 DDX11L8A8MPP1 907 aa9.54□□□□□ -0.88
PRPF4B-202ENST00000461612 CD46P15529 392 aa9.54□□□□□ -0.88
PRPF4B-202ENST00000461612 WNT2BQ93097 391 aa9.54□□□□□ -0.88
PRPF4B-202ENST00000461612 TMEM132AQ24JP5 1023 aa9.53□□□□□ -0.88
PRPF4B-202ENST00000461612 DIXDC1Q155Q3 683 aa9.52□□□□□ -0.89
PRPF4B-202ENST00000461612 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
PRPF4B-202ENST00000461612 FAM117AQ9C073 453 aa9.52□□□□□ -0.89
PRPF4B-202ENST00000461612 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
PRPF4B-202ENST00000461612 SLC10A3P09131 477 aa9.5□□□□□ -0.89
PRPF4B-202ENST00000461612 PPP4CP60510 307 aa9.49□□□□□ -0.89
PRPF4B-202ENST00000461612 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
PRPF4B-202ENST00000461612 RSPH6AQ9H0K4 717 aa9.49□□□□□ -0.89
PRPF4B-202ENST00000461612 TSR3Q9UJK0 312 aaKnown RBP9.49□□□□□ -0.89
PRPF4B-202ENST00000461612 MYT1LQ9UL68 1186 aa9.49□□□□□ -0.89
PRPF4B-202ENST00000461612 GCGRP47871 477 aa9.48□□□□□ -0.89
PRPF4B-202ENST00000461612 THSD4Q6ZMP0 1018 aa9.48□□□□□ -0.89
PRPF4B-202ENST00000461612 PRR14Q9BWN1 585 aa9.48□□□□□ -0.89
PRPF4B-202ENST00000461612 RNF40O75150 1001 aa9.47□□□□□ -0.89
PRPF4B-202ENST00000461612 KMT5BQ4FZB7 885 aa9.47□□□□□ -0.89
PRPF4B-202ENST00000461612 KCTD12Q96CX2 325 aaKnown RBP9.47□□□□□ -0.89
PRPF4B-202ENST00000461612 HPS5Q9UPZ3 1129 aa9.47□□□□□ -0.89
PRPF4B-202ENST00000461612 PLEKHG3A1L390 1219 aa9.46□□□□□ -0.9
PRPF4B-202ENST00000461612 BCAMP50895 628 aa9.46□□□□□ -0.9
PRPF4B-202ENST00000461612 USP46P62068 366 aa9.46□□□□□ -0.9
PRPF4B-202ENST00000461612 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
PRPF4B-202ENST00000461612 NUTM1Q86Y26 1132 aa9.46□□□□□ -0.9
PRPF4B-202ENST00000461612 SPNS2Q8IVW8 549 aa9.46□□□□□ -0.9
PRPF4B-202ENST00000461612 GOPCQ9HD26 462 aa9.46□□□□□ -0.9
PRPF4B-202ENST00000461612 KDM4AO75164 1064 aa9.44□□□□□ -0.9
PRPF4B-202ENST00000461612 CFHP08603 1231 aa9.44□□□□□ -0.9
PRPF4B-202ENST00000461612 GRIPAP1Q4V328 841 aa9.44□□□□□ -0.9
PRPF4B-202ENST00000461612 SPIRE2Q8WWL2 714 aa9.44□□□□□ -0.9
PRPF4B-202ENST00000461612 SH3D19Q5HYK7 790 aa9.43□□□□□ -0.9
PRPF4B-202ENST00000461612 TBC1D2Q9BYX2 928 aa9.43□□□□□ -0.9
PRPF4B-202ENST00000461612 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-202ENST00000461612 GJA5P36382 358 aa9.41□□□□□ -0.9
PRPF4B-202ENST00000461612 SKIV2LQ15477 1246 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-202ENST00000461612 WBP1LQ9NX94 342 aa9.41□□□□□ -0.9
PRPF4B-202ENST00000461612 ATP6V1AP38606 617 aa9.4□□□□□ -0.9
PRPF4B-202ENST00000461612 RNF166Q96A37 237 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-202ENST00000461612 TUSC1Q2TAM9 212 aa9.39□□□□□ -0.91
PRPF4B-202ENST00000461612 MYSM1Q5VVJ2 828 aa9.39□□□□□ -0.91
PRPF4B-202ENST00000461612 SPTLC1O15269 473 aa9.38□□□□□ -0.91
PRPF4B-202ENST00000461612 HOXA2O43364 376 aa9.38□□□□□ -0.91
PRPF4B-202ENST00000461612 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
PRPF4B-202ENST00000461612 APLP1P51693 650 aa9.37□□□□□ -0.91
PRPF4B-202ENST00000461612 PTPN5P54829 565 aa9.37□□□□□ -0.91
PRPF4B-202ENST00000461612 FUT2Q10981 343 aa9.37□□□□□ -0.91
PRPF4B-202ENST00000461612 HCSTQ9UBK5 93 aa9.37□□□□□ -0.91
PRPF4B-202ENST00000461612 MOXD2PA6NHM9 499 aa9.36□□□□□ -0.91
PRPF4B-202ENST00000461612 CLK2P49760 499 aaKnown RBP9.36□□□□□ -0.91
PRPF4B-202ENST00000461612 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
PRPF4B-202ENST00000461612 RSBN1LQ6PCB5 846 aaPredicted RBP9.35□□□□□ -0.91
PRPF4B-202ENST00000461612 PCDHB3Q9Y5E6 796 aa9.35□□□□□ -0.91
PRPF4B-202ENST00000461612 MORN1Q5T089 497 aa9.34□□□□□ -0.91
PRPF4B-202ENST00000461612 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
PRPF4B-202ENST00000461612 FDX1P10109 184 aa9.33□□□□□ -0.92
PRPF4B-202ENST00000461612 MMRN1Q13201 1228 aa9.33□□□□□ -0.92
PRPF4B-202ENST00000461612 NR1I2O75469 434 aa9.32□□□□□ -0.92
PRPF4B-202ENST00000461612 NDUFV2P19404 249 aa9.32□□□□□ -0.92
PRPF4B-202ENST00000461612 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.32□□□□□ -0.92
PRPF4B-202ENST00000461612 Q3C1V9 767 aa9.31□□□□□ -0.92
PRPF4B-202ENST00000461612 PRPF38BQ5VTL8 546 aaKnown RBP9.31□□□□□ -0.92
PRPF4B-202ENST00000461612 LIMD1Q9UGP4 676 aa9.31□□□□□ -0.92
PRPF4B-202ENST00000461612 SALL2Q9Y467 1007 aaPredicted RBP9.31□□□□□ -0.92
PRPF4B-202ENST00000461612 PUS10Q3MIT2 529 aaKnown RBP9.3□□□□□ -0.92
PRPF4B-202ENST00000461612 ATP1B4Q9UN42 357 aaPredicted RBP9.3□□□□□ -0.92
PRPF4B-202ENST00000461612 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
PRPF4B-202ENST00000461612 SLC27A5Q9Y2P5 690 aa9.29□□□□□ -0.92
PRPF4B-202ENST00000461612 SPDYE5A6NIY4 337 aa9.28□□□□□ -0.92
PRPF4B-202ENST00000461612 PPP2R2DQ66LE6 453 aa9.28□□□□□ -0.92
PRPF4B-202ENST00000461612 BLOC1S3Q6QNY0 202 aa9.28□□□□□ -0.92
PRPF4B-202ENST00000461612 SCUBE3Q8IX30 993 aa9.28□□□□□ -0.92
PRPF4B-202ENST00000461612 ZBTB3Q9H5J0 574 aa9.28□□□□□ -0.92
PRPF4B-202ENST00000461612 PCDHGC3Q9UN70 934 aa9.28□□□□□ -0.92
PRPF4B-202ENST00000461612 LILRB3O75022 631 aa9.27□□□□□ -0.93
PRPF4B-202ENST00000461612 GUCA2AQ02747 115 aa9.27□□□□□ -0.93
PRPF4B-202ENST00000461612 HLA-CQ95604 372 aa9.27□□□□□ -0.93
PRPF4B-202ENST00000461612 IL21Q9HBE4 155 aa9.27□□□□□ -0.93
PRPF4B-202ENST00000461612 PCDHB15Q9Y5E8 787 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms