RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 TMEM134Q9H6X4 195 aa10.06□□□□□ -0.8
DDX1-204ENST00000459706 PNMA3Q9UL41 463 aa10.06□□□□□ -0.8
DDX1-204ENST00000459706 ATP1B4Q9UN42 357 aaPredicted RBP10.06□□□□□ -0.8
DDX1-204ENST00000459706 TMEM259Q4ZIN3 620 aa10.05□□□□□ -0.8
DDX1-204ENST00000459706 PPP2R2DQ66LE6 453 aa10.05□□□□□ -0.8
DDX1-204ENST00000459706 NLRP7Q8WX94 980 aa10.05□□□□□ -0.8
DDX1-204ENST00000459706 SLC4A5Q9BY07 1137 aa10.05□□□□□ -0.8
DDX1-204ENST00000459706 POLR3EQ9NVU0 708 aa10.05□□□□□ -0.8
DDX1-204ENST00000459706 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
DDX1-204ENST00000459706 PROCA1Q8NCQ7 364 aaPredicted RBP10.04□□□□□ -0.8
DDX1-204ENST00000459706 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
DDX1-204ENST00000459706 UBTFP17480 764 aaKnown RBP10.03□□□□□ -0.8
DDX1-204ENST00000459706 MCM6Q14566 821 aa10.03□□□□□ -0.8
DDX1-204ENST00000459706 SPIRE2Q8WWL2 714 aa10.03□□□□□ -0.8
DDX1-204ENST00000459706 SPTLC1O15269 473 aa10.02□□□□□ -0.81
DDX1-204ENST00000459706 RIC3Q7Z5B4 369 aa10.02□□□□□ -0.81
DDX1-204ENST00000459706 SOCS7O14512 581 aa10.01□□□□□ -0.81
DDX1-204ENST00000459706 RAD21O60216 631 aa10□□□□□ -0.81
DDX1-204ENST00000459706 USP46P62068 366 aa10□□□□□ -0.81
DDX1-204ENST00000459706 DDX11L8A8MPP1 907 aa9.99□□□□□ -0.81
DDX1-204ENST00000459706 SLC4A3P48751 1232 aa9.99□□□□□ -0.81
DDX1-204ENST00000459706 HDGFP51858 240 aaKnown RBP9.99□□□□□ -0.81
DDX1-204ENST00000459706 ZBED2Q9BTP6 218 aa9.99□□□□□ -0.81
DDX1-204ENST00000459706 RABGEF1Q9UJ41 708 aa9.99□□□□□ -0.81
DDX1-204ENST00000459706 APBB1O00213 710 aa9.98□□□□□ -0.81
DDX1-204ENST00000459706 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
DDX1-204ENST00000459706 TRAK2O60296 914 aa9.98□□□□□ -0.81
DDX1-204ENST00000459706 PBX2P40425 430 aa9.98□□□□□ -0.81
DDX1-204ENST00000459706 RFC5P40937 340 aa9.98□□□□□ -0.81
DDX1-204ENST00000459706 KCNK17Q96T54 332 aa9.98□□□□□ -0.81
DDX1-204ENST00000459706 RSBN1LQ6PCB5 846 aaPredicted RBP9.97□□□□□ -0.81
DDX1-204ENST00000459706 KIAA1468Q9P260 1216 aa9.97□□□□□ -0.81
DDX1-204ENST00000459706 PRPF38BQ5VTL8 546 aaKnown RBP9.96□□□□□ -0.82
DDX1-204ENST00000459706 PRM3Q9NNZ6 103 aa9.96□□□□□ -0.82
DDX1-204ENST00000459706 LIMD1Q9UGP4 676 aa9.95□□□□□ -0.82
DDX1-204ENST00000459706 BAZ1AQ9NRL2 1556 aaPredicted RBP9.94□□□□□ -0.82
DDX1-204ENST00000459706 KDM4AO75164 1064 aa9.94□□□□□ -0.82
DDX1-204ENST00000459706 GCGRP47871 477 aa9.94□□□□□ -0.82
DDX1-204ENST00000459706 PROX2Q3B8N5 592 aa9.94□□□□□ -0.82
DDX1-204ENST00000459706 RDH13Q8NBN7 331 aa9.94□□□□□ -0.82
DDX1-204ENST00000459706 ERBB3P21860 1342 aa9.93□□□□□ -0.82
DDX1-204ENST00000459706 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
DDX1-204ENST00000459706 LILRB3O75022 631 aa9.93□□□□□ -0.82
DDX1-204ENST00000459706 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
DDX1-204ENST00000459706 OTUD5Q96G74 571 aa9.93□□□□□ -0.82
DDX1-204ENST00000459706 GRIPAP1Q4V328 841 aa9.92□□□□□ -0.82
DDX1-204ENST00000459706 PROSER2Q86WR7 435 aaPredicted RBP9.92□□□□□ -0.82
DDX1-204ENST00000459706 NECTIN2Q92692 538 aa9.92□□□□□ -0.82
DDX1-204ENST00000459706 CLUAP1Q96AJ1 413 aa9.92□□□□□ -0.82
DDX1-204ENST00000459706 MOXD2PA6NHM9 499 aa9.91□□□□□ -0.82
DDX1-204ENST00000459706 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
DDX1-204ENST00000459706 SMAPO00193 183 aa9.9□□□□□ -0.82
DDX1-204ENST00000459706 FAM98CQ17RN3 349 aaKnown RBP9.9□□□□□ -0.82
DDX1-204ENST00000459706 SLF2Q8IX21 1173 aa9.9□□□□□ -0.82
DDX1-204ENST00000459706 FNBP4Q8N3X1 1017 aaPredicted RBP9.9□□□□□ -0.82
DDX1-204ENST00000459706 ZBTB3Q9H5J0 574 aa9.89□□□□□ -0.83
DDX1-204ENST00000459706 SMARCA4P51532 1647 aa9.89□□□□□ -0.83
DDX1-204ENST00000459706 ZNF687Q8N1G0 1237 aa9.88□□□□□ -0.83
DDX1-204ENST00000459706 NBPF3Q9H094 633 aa9.88□□□□□ -0.83
DDX1-204ENST00000459706 TK2O00142 265 aa9.87□□□□□ -0.83
DDX1-204ENST00000459706 HOXA2O43364 376 aa9.87□□□□□ -0.83
DDX1-204ENST00000459706 PSEN2P49810 448 aa9.87□□□□□ -0.83
DDX1-204ENST00000459706 VARS2Q5ST30 1063 aaKnown RBP9.87□□□□□ -0.83
DDX1-204ENST00000459706 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
DDX1-204ENST00000459706 C1orf115Q9H7X2 142 aa9.87□□□□□ -0.83
DDX1-204ENST00000459706 COG6Q9Y2V7 657 aa9.87□□□□□ -0.83
DDX1-204ENST00000459706 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
DDX1-204ENST00000459706 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
DDX1-204ENST00000459706 FDX1P10109 184 aa9.86□□□□□ -0.83
DDX1-204ENST00000459706 NDUFV2P19404 249 aa9.86□□□□□ -0.83
DDX1-204ENST00000459706 NUTM2DQ5VT03 806 aaPredicted RBP9.86□□□□□ -0.83
DDX1-204ENST00000459706 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
DDX1-204ENST00000459706 SNRKQ9NRH2 765 aa9.86□□□□□ -0.83
DDX1-204ENST00000459706 VPS9D1Q9Y2B5 631 aa9.86□□□□□ -0.83
DDX1-204ENST00000459706 CECR2Q9BXF3 1484 aa9.85□□□□□ -0.83
DDX1-204ENST00000459706 SLC10A3P09131 477 aa9.85□□□□□ -0.83
DDX1-204ENST00000459706 SERPINA10Q9UK55 444 aa9.85□□□□□ -0.83
DDX1-204ENST00000459706 PCDHB15Q9Y5E8 787 aa9.84□□□□□ -0.83
DDX1-204ENST00000459706 QPCTQ16769 361 aa9.83□□□□□ -0.84
DDX1-204ENST00000459706 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
DDX1-204ENST00000459706 MROH2BQ7Z745 1585 aa9.83□□□□□ -0.84
DDX1-204ENST00000459706 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
DDX1-204ENST00000459706 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
DDX1-204ENST00000459706 AP1G2O75843 785 aa9.82□□□□□ -0.84
DDX1-204ENST00000459706 HRCP23327 699 aa9.82□□□□□ -0.84
DDX1-204ENST00000459706 EMP3P54852 163 aa9.82□□□□□ -0.84
DDX1-204ENST00000459706 CSPP1Q1MSJ5 1256 aa9.82□□□□□ -0.84
DDX1-204ENST00000459706 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
DDX1-204ENST00000459706 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
DDX1-204ENST00000459706 MTMR14Q8NCE2 650 aa9.82□□□□□ -0.84
DDX1-204ENST00000459706 POM121Q96HA1 1249 aa9.82□□□□□ -0.84
DDX1-204ENST00000459706 BHMG1C9JSJ3 638 aaPredicted RBP9.81□□□□□ -0.84
DDX1-204ENST00000459706 ST18O60284 1047 aa9.81□□□□□ -0.84
DDX1-204ENST00000459706 MTMR2Q13614 643 aa9.81□□□□□ -0.84
DDX1-204ENST00000459706 KMT5BQ4FZB7 885 aa9.81□□□□□ -0.84
DDX1-204ENST00000459706 RTL5Q5HYW3 569 aaPredicted RBP9.81□□□□□ -0.84
DDX1-204ENST00000459706 DMRTA1Q5VZB9 504 aa9.81□□□□□ -0.84
DDX1-204ENST00000459706 PRR14Q9BWN1 585 aa9.81□□□□□ -0.84
DDX1-204ENST00000459706 SEPT9Q9UHD8 586 aaPredicted RBP9.81□□□□□ -0.84
DDX1-204ENST00000459706 PEG3Q9GZU2 1588 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms