RNA–Protein interactions for RNA: ENST00000453965.2

LINC01878-202, Transcript of long intergenic non-protein coding RNA 1878, humanhuman

TSL 3 BASIC

Gene LINC01878, Length 405 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01878-202ENST00000453965 PARP9Q8IXQ6 854 aa10.03□□□□□ -0.8
LINC01878-202ENST00000453965 GOLGA8CPA6NN73 597 aa10.02□□□□□ -0.81
LINC01878-202ENST00000453965 PDE4DQ08499 809 aa10.02□□□□□ -0.81
LINC01878-202ENST00000453965 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
LINC01878-202ENST00000453965 TMUB1Q9BVT8 246 aa10.01□□□□□ -0.81
LINC01878-202ENST00000453965 GPBP1L1Q9HC44 474 aaPredicted RBP10.01□□□□□ -0.81
LINC01878-202ENST00000453965 RNF40O75150 1001 aa10□□□□□ -0.81
LINC01878-202ENST00000453965 TTLL12Q14166 644 aaPredicted RBP10□□□□□ -0.81
LINC01878-202ENST00000453965 THSD4Q6ZMP0 1018 aa10□□□□□ -0.81
LINC01878-202ENST00000453965 RNF166Q96A37 237 aaPredicted RBP10□□□□□ -0.81
LINC01878-202ENST00000453965 SOWAHBA6NEL2 793 aa9.99□□□□□ -0.81
LINC01878-202ENST00000453965 LRCH3Q96II8 777 aa9.99□□□□□ -0.81
LINC01878-202ENST00000453965 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.99□□□□□ -0.81
LINC01878-202ENST00000453965 GIGYF2Q6Y7W6 1299 aaKnown RBP9.98□□□□□ -0.81
LINC01878-202ENST00000453965 SLC10A3P09131 477 aa9.97□□□□□ -0.81
LINC01878-202ENST00000453965 GPCPD1Q9NPB8 672 aa9.97□□□□□ -0.81
LINC01878-202ENST00000453965 DAXXQ9UER7 740 aaPredicted RBP9.97□□□□□ -0.81
LINC01878-202ENST00000453965 HPS5Q9UPZ3 1129 aa9.97□□□□□ -0.81
LINC01878-202ENST00000453965 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
LINC01878-202ENST00000453965 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
LINC01878-202ENST00000453965 WBP1LQ9NX94 342 aa9.96□□□□□ -0.82
LINC01878-202ENST00000453965 MS4A1P11836 297 aa9.95□□□□□ -0.82
LINC01878-202ENST00000453965 CLCN1P35523 988 aa9.95□□□□□ -0.82
LINC01878-202ENST00000453965 PTPN5P54829 565 aa9.95□□□□□ -0.82
LINC01878-202ENST00000453965 FAM217BQ9NTX9 383 aaPredicted RBP9.95□□□□□ -0.82
LINC01878-202ENST00000453965 NEUROD2Q15784 382 aa9.92□□□□□ -0.82
LINC01878-202ENST00000453965 SLF2Q8IX21 1173 aa9.92□□□□□ -0.82
LINC01878-202ENST00000453965 KDM4CQ9H3R0 1056 aa9.92□□□□□ -0.82
LINC01878-202ENST00000453965 RDH13Q8NBN7 331 aa9.91□□□□□ -0.82
LINC01878-202ENST00000453965 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
LINC01878-202ENST00000453965 CFHP08603 1231 aa9.9□□□□□ -0.82
LINC01878-202ENST00000453965 CD46P15529 392 aa9.9□□□□□ -0.82
LINC01878-202ENST00000453965 SSTR3P32745 418 aaPredicted RBP9.9□□□□□ -0.82
LINC01878-202ENST00000453965 APLP1P51693 650 aa9.9□□□□□ -0.82
LINC01878-202ENST00000453965 HDGFP51858 240 aaKnown RBP9.9□□□□□ -0.82
LINC01878-202ENST00000453965 PPP4CP60510 307 aa9.88□□□□□ -0.83
LINC01878-202ENST00000453965 SULF1Q8IWU6 871 aa9.86□□□□□ -0.83
LINC01878-202ENST00000453965 FAM117AQ9C073 453 aa9.86□□□□□ -0.83
LINC01878-202ENST00000453965 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
LINC01878-202ENST00000453965 GCGRP47871 477 aa9.84□□□□□ -0.83
LINC01878-202ENST00000453965 HLA-CQ95604 372 aa9.84□□□□□ -0.83
LINC01878-202ENST00000453965 PLEKHG3A1L390 1219 aa9.83□□□□□ -0.84
LINC01878-202ENST00000453965 SLC4A3P48751 1232 aa9.82□□□□□ -0.84
LINC01878-202ENST00000453965 FUT2Q10981 343 aa9.82□□□□□ -0.84
LINC01878-202ENST00000453965 PUS10Q3MIT2 529 aaKnown RBP9.82□□□□□ -0.84
LINC01878-202ENST00000453965 HCSTQ9UBK5 93 aa9.82□□□□□ -0.84
LINC01878-202ENST00000453965 GUCA2AQ02747 115 aa9.8□□□□□ -0.84
LINC01878-202ENST00000453965 ACTN4O43707 911 aaKnown RBP9.79□□□□□ -0.84
LINC01878-202ENST00000453965 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
LINC01878-202ENST00000453965 BLOC1S3Q6QNY0 202 aa9.79□□□□□ -0.84
LINC01878-202ENST00000453965 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
LINC01878-202ENST00000453965 KDM4AO75164 1064 aa9.78□□□□□ -0.84
LINC01878-202ENST00000453965 COPS2P61201 443 aa9.78□□□□□ -0.84
LINC01878-202ENST00000453965 IL27Q8NEV9 243 aa9.78□□□□□ -0.84
LINC01878-202ENST00000453965 RSPH4AQ5TD94 716 aa9.77□□□□□ -0.85
LINC01878-202ENST00000453965 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
LINC01878-202ENST00000453965 PCDHB3Q9Y5E6 796 aa9.77□□□□□ -0.85
LINC01878-202ENST00000453965 MOXD2PA6NHM9 499 aa9.76□□□□□ -0.85
LINC01878-202ENST00000453965 HOXA2O43364 376 aa9.76□□□□□ -0.85
LINC01878-202ENST00000453965 NDUFV2P19404 249 aa9.76□□□□□ -0.85
LINC01878-202ENST00000453965 MTRQ99707 1265 aa9.76□□□□□ -0.85
LINC01878-202ENST00000453965 TJAP1Q5JTD0 557 aa9.75□□□□□ -0.85
LINC01878-202ENST00000453965 ZNF516Q92618 1163 aa9.75□□□□□ -0.85
LINC01878-202ENST00000453965 NECTIN2Q92692 538 aa9.75□□□□□ -0.85
LINC01878-202ENST00000453965 TLL1O43897 1013 aa9.74□□□□□ -0.85
LINC01878-202ENST00000453965 MORN1Q5T089 497 aa9.74□□□□□ -0.85
LINC01878-202ENST00000453965 MYSM1Q5VVJ2 828 aa9.74□□□□□ -0.85
LINC01878-202ENST00000453965 NYAP1Q6ZVC0 841 aa9.74□□□□□ -0.85
LINC01878-202ENST00000453965 NUTM1Q86Y26 1132 aa9.74□□□□□ -0.85
LINC01878-202ENST00000453965 DDRGK1Q96HY6 314 aa9.73□□□□□ -0.85
LINC01878-202ENST00000453965 ATP6V1AP38606 617 aa9.72□□□□□ -0.85
LINC01878-202ENST00000453965 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
LINC01878-202ENST00000453965 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
LINC01878-202ENST00000453965 PCDHGC3Q9UN70 934 aa9.72□□□□□ -0.85
LINC01878-202ENST00000453965 SLC27A5Q9Y2P5 690 aa9.72□□□□□ -0.85
LINC01878-202ENST00000453965 USP46P62068 366 aa9.7□□□□□ -0.86
LINC01878-202ENST00000453965 RNF19BQ6ZMZ0 732 aa9.7□□□□□ -0.86
LINC01878-202ENST00000453965 NKX2-3Q8TAU0 364 aa9.7□□□□□ -0.86
LINC01878-202ENST00000453965 POLR3EQ9NVU0 708 aa9.7□□□□□ -0.86
LINC01878-202ENST00000453965 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
LINC01878-202ENST00000453965 RSBN1LQ6PCB5 846 aaPredicted RBP9.69□□□□□ -0.86
LINC01878-202ENST00000453965 SCUBE3Q8IX30 993 aa9.69□□□□□ -0.86
LINC01878-202ENST00000453965 SYMPKQ92797 1274 aaKnown RBP9.69□□□□□ -0.86
LINC01878-202ENST00000453965 PCDHB15Q9Y5E8 787 aa9.69□□□□□ -0.86
LINC01878-202ENST00000453965 ITGBL1O95965 494 aaPredicted RBP9.68□□□□□ -0.86
LINC01878-202ENST00000453965 ZPR1O75312 459 aa9.67□□□□□ -0.86
LINC01878-202ENST00000453965 FDX1P10109 184 aa9.67□□□□□ -0.86
LINC01878-202ENST00000453965 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
LINC01878-202ENST00000453965 SH3D19Q5HYK7 790 aa9.67□□□□□ -0.86
LINC01878-202ENST00000453965 RIC3Q7Z5B4 369 aa9.67□□□□□ -0.86
LINC01878-202ENST00000453965 PROCA1Q8NCQ7 364 aaPredicted RBP9.67□□□□□ -0.86
LINC01878-202ENST00000453965 IL21Q9HBE4 155 aa9.67□□□□□ -0.86
LINC01878-202ENST00000453965 SPTLC1O15269 473 aa9.66□□□□□ -0.86
LINC01878-202ENST00000453965 CLK2P49760 499 aaKnown RBP9.66□□□□□ -0.86
LINC01878-202ENST00000453965 THAP11Q96EK4 314 aa9.66□□□□□ -0.86
LINC01878-202ENST00000453965 NR1I2O75469 434 aa9.65□□□□□ -0.86
LINC01878-202ENST00000453965 QPCTQ16769 361 aa9.65□□□□□ -0.86
LINC01878-202ENST00000453965 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
LINC01878-202ENST00000453965 PRDM9Q9NQV7 894 aa9.64□□□□□ -0.87
LINC01878-202ENST00000453965 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms