RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 RWDD1Q9H446 243 aaPredicted RBP2.71□□□□□ -1.98
USP53-202ENST00000450251 GABPB1Q06547 395 aaPredicted RBP2.71□□□□□ -1.98
USP53-202ENST00000450251 CCDC91Q7Z6B0 441 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 PLCD4Q9BRC7 762 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 HMGB1P1B2RPK0 211 aaPredicted RBP2.71□□□□□ -1.98
USP53-202ENST00000450251 KIF2AO00139 706 aaPredicted RBP2.71□□□□□ -1.98
USP53-202ENST00000450251 NUCB2P80303 420 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 UHRF1BP1LA0JNW5 1464 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 POLR3GO15318 223 aaPredicted RBP2.71□□□□□ -1.98
USP53-202ENST00000450251 MBD3O95983 291 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 TRHP20396 242 aaPredicted RBP2.71□□□□□ -1.98
USP53-202ENST00000450251 TEX2Q8IWB9 1127 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 CEP120Q8N960 986 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 GIMAP7Q8NHV1 300 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 FEZ1Q99689 392 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 KIF15Q9NS87 1388 aa2.71□□□□□ -1.98
USP53-202ENST00000450251 ERCC6Q03468 1493 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 TULP1O00294 542 aaPredicted RBP2.7□□□□□ -1.98
USP53-202ENST00000450251 GTF2A1P52655 376 aaPredicted RBP2.7□□□□□ -1.98
USP53-202ENST00000450251 ATP6V1DQ9Y5K8 247 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 KIAA0586Q9BVV6 1533 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 IQSEC2Q5JU85 1478 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 CCDC70Q6NSX1 233 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 URB2Q14146 1524 aaKnown RBP2.7□□□□□ -1.98
USP53-202ENST00000450251 ARHGAP35Q9NRY4 1499 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 RBM25P49756 843 aaKnown RBP2.7□□□□□ -1.98
USP53-202ENST00000450251 SARNPP82979 210 aaKnown RBP2.7□□□□□ -1.98
USP53-202ENST00000450251 LMOD3Q0VAK6 560 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 SLC26A8Q96RN1 970 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 TOPBP1Q92547 1522 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 CDR1P51861 262 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 FAM184AQ8NB25 1140 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 BACH2Q9BYV9 841 aa2.7□□□□□ -1.98
USP53-202ENST00000450251 BCL11BQ9C0K0 894 aaPredicted RBP2.7□□□□□ -1.98
USP53-202ENST00000450251 MPHOSPH10O00566 681 aaKnown RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 EIF3JO75822 258 aaKnown RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 IVLP07476 585 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 MROH2BQ7Z745 1585 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 CGNL1Q0VF96 1302 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 ERICH3Q5RHP9 1530 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 KDM5BQ9UGL1 1544 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 TRAK2O60296 914 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 DMTNQ08495 405 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 RSPH4AQ5TD94 716 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 GZF1Q9H116 711 aaPredicted RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 EFCC1Q9HA90 598 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 ST18O60284 1047 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 MFAP1P55081 439 aaKnown RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 DCTN1Q14203 1278 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 ZRSR2Q15696 482 aaKnown RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 MYCBPQ99417 103 aaPredicted RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 PSMD1Q99460 953 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 DDX49Q9Y6V7 483 aaKnown RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 HSPA5P11021 654 aaKnown RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 RGS3P49796 1198 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 PPP4R3BQ5MIZ7 849 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 PAXIP1Q6ZW49 1069 aaPredicted RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 CHMP4CQ96CF2 233 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 BRMS1Q9HCU9 246 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 ATAD2Q6PL18 1390 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 DHX29Q7Z478 1369 aaKnown RBP2.69□□□□□ -1.98
USP53-202ENST00000450251 OFD1O75665 1012 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 HSP90B2PQ58FF3 399 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 STK11IPQ8N1F8 1099 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 CCDC191Q8NCU4 936 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 KIF7Q2M1P5 1343 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 GRIN2BQ13224 1484 aa2.69□□□□□ -1.98
USP53-202ENST00000450251 PAK3O75914 559 aaPredicted RBP2.68□□□□□ -1.98
USP53-202ENST00000450251 TUBB4AP04350 444 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 KIAA1328Q86T90 577 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 INCENPQ9NQS7 918 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 SYNJ2O15056 1496 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 CUX1P39880 1505 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 SYNJ1O43426 1573 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 GOLGA6L10A6NI86 522 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 TDO2P48775 406 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 TTLL5Q6EMB2 1281 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 WWC1Q8IX03 1113 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 OGFRQ9NZT2 677 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 SSUH2Q9Y2M2 353 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 CCDC18Q5T9S5 1454 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 HSP90AB3PQ58FF7 597 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 V9GYY5 206 aaPredicted RBP2.68□□□□□ -1.98
USP53-202ENST00000450251 MYBBP1AQ9BQG0 1328 aaKnown RBP2.68□□□□□ -1.98
USP53-202ENST00000450251 KIF1CO43896 1103 aaKnown RBP2.68□□□□□ -1.98
USP53-202ENST00000450251 NUTM1Q86Y26 1132 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 TSPY26PQ9H489 355 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 SUDS3Q9H7L9 328 aaPredicted RBP2.68□□□□□ -1.98
USP53-202ENST00000450251 MRVI1Q9Y6F6 885 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 RAB3GAP2Q9H2M9 1393 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 FMN1Q68DA7 1419 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 BRD4O60885 1362 aaPredicted RBP2.68□□□□□ -1.98
USP53-202ENST00000450251 HMMRO75330 724 aa2.68□□□□□ -1.98
USP53-202ENST00000450251 TACO1Q9BSH4 297 aaKnown RBP2.68□□□□□ -1.98
USP53-202ENST00000450251 ARAP1Q96P48 1450 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 SCAPERQ9BY12 1400 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 ZMYM3Q14202 1370 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 A0A1B0GUL7 405 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 TRIM6-TRIM34B2RNG4 842 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 POTEB2H3BUK9 544 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms