RNA–Protein interactions for RNA: ENST00000447421.5

CHEK2-218, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 900 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-218ENST00000447421 SAMD7Q7Z3H4 446 aa9.74□□□□□ -0.85
CHEK2-218ENST00000447421 WNT2BQ93097 391 aa9.74□□□□□ -0.85
CHEK2-218ENST00000447421 GPCPD1Q9NPB8 672 aa9.74□□□□□ -0.85
CHEK2-218ENST00000447421 DAXXQ9UER7 740 aaPredicted RBP9.74□□□□□ -0.85
CHEK2-218ENST00000447421 LRCH3Q96II8 777 aa9.73□□□□□ -0.85
CHEK2-218ENST00000447421 RNF40O75150 1001 aa9.72□□□□□ -0.85
CHEK2-218ENST00000447421 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.72□□□□□ -0.85
CHEK2-218ENST00000447421 MYT1LQ9UL68 1186 aa9.72□□□□□ -0.85
CHEK2-218ENST00000447421 PARP9Q8IXQ6 854 aa9.71□□□□□ -0.86
CHEK2-218ENST00000447421 RSPH4AQ5TD94 716 aa9.7□□□□□ -0.86
CHEK2-218ENST00000447421 GIGYF2Q6Y7W6 1299 aaKnown RBP9.7□□□□□ -0.86
CHEK2-218ENST00000447421 SPNS2Q8IVW8 549 aa9.7□□□□□ -0.86
CHEK2-218ENST00000447421 SULF1Q8IWU6 871 aa9.7□□□□□ -0.86
CHEK2-218ENST00000447421 SLF2Q8IX21 1173 aa9.7□□□□□ -0.86
CHEK2-218ENST00000447421 KCTD12Q96CX2 325 aaKnown RBP9.7□□□□□ -0.86
CHEK2-218ENST00000447421 DDX11L8A8MPP1 907 aa9.69□□□□□ -0.86
CHEK2-218ENST00000447421 GPBP1L1Q9HC44 474 aaPredicted RBP9.69□□□□□ -0.86
CHEK2-218ENST00000447421 SOWAHBA6NEL2 793 aa9.68□□□□□ -0.86
CHEK2-218ENST00000447421 BRPF1P55201 1214 aaPredicted RBP9.68□□□□□ -0.86
CHEK2-218ENST00000447421 REPIN1Q9BWE0 567 aaKnown RBP9.68□□□□□ -0.86
CHEK2-218ENST00000447421 BCAMP50895 628 aa9.67□□□□□ -0.86
CHEK2-218ENST00000447421 RDH13Q8NBN7 331 aa9.67□□□□□ -0.86
CHEK2-218ENST00000447421 TMUB1Q9BVT8 246 aa9.67□□□□□ -0.86
CHEK2-218ENST00000447421 KDM4CQ9H3R0 1056 aa9.67□□□□□ -0.86
CHEK2-218ENST00000447421 SSTR3P32745 418 aaPredicted RBP9.66□□□□□ -0.86
CHEK2-218ENST00000447421 NECTIN2Q92692 538 aa9.66□□□□□ -0.86
CHEK2-218ENST00000447421 FAM217BQ9NTX9 383 aaPredicted RBP9.66□□□□□ -0.86
CHEK2-218ENST00000447421 PPP4CP60510 307 aa9.65□□□□□ -0.86
CHEK2-218ENST00000447421 HPS5Q9UPZ3 1129 aa9.65□□□□□ -0.86
CHEK2-218ENST00000447421 THSD4Q6ZMP0 1018 aa9.64□□□□□ -0.87
CHEK2-218ENST00000447421 TSR3Q9UJK0 312 aaKnown RBP9.64□□□□□ -0.87
CHEK2-218ENST00000447421 RNF166Q96A37 237 aaPredicted RBP9.63□□□□□ -0.87
CHEK2-218ENST00000447421 MS4A1P11836 297 aa9.62□□□□□ -0.87
CHEK2-218ENST00000447421 PTPN5P54829 565 aa9.62□□□□□ -0.87
CHEK2-218ENST00000447421 BEGAINQ9BUH8 593 aa9.61□□□□□ -0.87
CHEK2-218ENST00000447421 SLC10A3P09131 477 aa9.6□□□□□ -0.87
CHEK2-218ENST00000447421 CD46P15529 392 aa9.6□□□□□ -0.87
CHEK2-218ENST00000447421 CFHP08603 1231 aa9.59□□□□□ -0.87
CHEK2-218ENST00000447421 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
CHEK2-218ENST00000447421 DDRGK1Q96HY6 314 aa9.59□□□□□ -0.87
CHEK2-218ENST00000447421 PRR14Q9BWN1 585 aa9.59□□□□□ -0.87
CHEK2-218ENST00000447421 WBP1LQ9NX94 342 aa9.59□□□□□ -0.87
CHEK2-218ENST00000447421 MMRN1Q13201 1228 aa9.58□□□□□ -0.88
CHEK2-218ENST00000447421 GCGRP47871 477 aa9.57□□□□□ -0.88
CHEK2-218ENST00000447421 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
CHEK2-218ENST00000447421 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
CHEK2-218ENST00000447421 FAM117AQ9C073 453 aa9.57□□□□□ -0.88
CHEK2-218ENST00000447421 HCSTQ9UBK5 93 aa9.56□□□□□ -0.88
CHEK2-218ENST00000447421 NYAP1Q6ZVC0 841 aa9.55□□□□□ -0.88
CHEK2-218ENST00000447421 KDM4AO75164 1064 aa9.54□□□□□ -0.88
CHEK2-218ENST00000447421 DIXDC1Q155Q3 683 aa9.54□□□□□ -0.88
CHEK2-218ENST00000447421 APLP1P51693 650 aa9.53□□□□□ -0.88
CHEK2-218ENST00000447421 USP46P62068 366 aa9.52□□□□□ -0.89
CHEK2-218ENST00000447421 GRIPAP1Q4V328 841 aa9.52□□□□□ -0.89
CHEK2-218ENST00000447421 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
CHEK2-218ENST00000447421 ACTN4O43707 911 aaKnown RBP9.51□□□□□ -0.89
CHEK2-218ENST00000447421 FUT2Q10981 343 aa9.51□□□□□ -0.89
CHEK2-218ENST00000447421 SPIRE2Q8WWL2 714 aa9.51□□□□□ -0.89
CHEK2-218ENST00000447421 TBC1D2Q9BYX2 928 aa9.51□□□□□ -0.89
CHEK2-218ENST00000447421 PLEKHG3A1L390 1219 aa9.5□□□□□ -0.89
CHEK2-218ENST00000447421 PCDHB3Q9Y5E6 796 aa9.5□□□□□ -0.89
CHEK2-218ENST00000447421 ATP6V1AP38606 617 aa9.49□□□□□ -0.89
CHEK2-218ENST00000447421 ATP1B4Q9UN42 357 aaPredicted RBP9.49□□□□□ -0.89
CHEK2-218ENST00000447421 HOXA2O43364 376 aa9.47□□□□□ -0.89
CHEK2-218ENST00000447421 PUS10Q3MIT2 529 aaKnown RBP9.47□□□□□ -0.89
CHEK2-218ENST00000447421 MYSM1Q5VVJ2 828 aa9.46□□□□□ -0.9
CHEK2-218ENST00000447421 MOXD2PA6NHM9 499 aa9.45□□□□□ -0.9
CHEK2-218ENST00000447421 NR1I2O75469 434 aa9.45□□□□□ -0.9
CHEK2-218ENST00000447421 COPS2P61201 443 aa9.45□□□□□ -0.9
CHEK2-218ENST00000447421 POLR3EQ9NVU0 708 aa9.45□□□□□ -0.9
CHEK2-218ENST00000447421 NDUFV2P19404 249 aa9.44□□□□□ -0.9
CHEK2-218ENST00000447421 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
CHEK2-218ENST00000447421 SH3D19Q5HYK7 790 aa9.44□□□□□ -0.9
CHEK2-218ENST00000447421 MORN1Q5T089 497 aa9.44□□□□□ -0.9
CHEK2-218ENST00000447421 BLOC1S3Q6QNY0 202 aa9.44□□□□□ -0.9
CHEK2-218ENST00000447421 RIC3Q7Z5B4 369 aa9.44□□□□□ -0.9
CHEK2-218ENST00000447421 FDX1P10109 184 aa9.43□□□□□ -0.9
CHEK2-218ENST00000447421 TMEM132AQ24JP5 1023 aa9.43□□□□□ -0.9
CHEK2-218ENST00000447421 MTRQ99707 1265 aa9.43□□□□□ -0.9
CHEK2-218ENST00000447421 CLK2P49760 499 aaKnown RBP9.42□□□□□ -0.9
CHEK2-218ENST00000447421 GUCA2AQ02747 115 aa9.42□□□□□ -0.9
CHEK2-218ENST00000447421 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
CHEK2-218ENST00000447421 HLA-CQ95604 372 aa9.42□□□□□ -0.9
CHEK2-218ENST00000447421 PCMTD1Q96MG8 357 aaPredicted RBP9.42□□□□□ -0.9
CHEK2-218ENST00000447421 GOPCQ9HD26 462 aa9.42□□□□□ -0.9
CHEK2-218ENST00000447421 SLC27A5Q9Y2P5 690 aa9.42□□□□□ -0.9
CHEK2-218ENST00000447421 SPTLC1O15269 473 aa9.41□□□□□ -0.9
CHEK2-218ENST00000447421 GJA5P36382 358 aa9.41□□□□□ -0.9
CHEK2-218ENST00000447421 Q3C1V9 767 aa9.41□□□□□ -0.9
CHEK2-218ENST00000447421 SCUBE3Q8IX30 993 aa9.41□□□□□ -0.9
CHEK2-218ENST00000447421 IL21Q9HBE4 155 aa9.41□□□□□ -0.9
CHEK2-218ENST00000447421 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
CHEK2-218ENST00000447421 TJAP1Q5JTD0 557 aa9.39□□□□□ -0.91
CHEK2-218ENST00000447421 LIMD1Q9UGP4 676 aa9.39□□□□□ -0.91
CHEK2-218ENST00000447421 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
CHEK2-218ENST00000447421 ZPR1O75312 459 aa9.38□□□□□ -0.91
CHEK2-218ENST00000447421 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
CHEK2-218ENST00000447421 FMNL1O95466 1100 aaPredicted RBP9.37□□□□□ -0.91
CHEK2-218ENST00000447421 KCNC4Q03721 635 aa9.37□□□□□ -0.91
CHEK2-218ENST00000447421 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms