RNA–Protein interactions for RNA: ENST00000443943.5

AP1S1-203, Transcript of adaptor related protein complex 1 subunit sigma 1, humanhuman

TSL 3

Gene AP1S1, Length 741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1-203ENST00000443943 ITGAEP38570 1179 aa31.89■■■□□ 2.7
AP1S1-203ENST00000443943 RIMS2Q9UQ26 1411 aa31.89■■■□□ 2.7
AP1S1-203ENST00000443943 NKTRP30414 1462 aaKnown RBP31.88■■■□□ 2.69
AP1S1-203ENST00000443943 NWD1Q149M9 1564 aa31.88■■■□□ 2.69
AP1S1-203ENST00000443943 TMEM131LA2VDJ0 1609 aa31.87■■■□□ 2.69
AP1S1-203ENST00000443943 PPP1R15AO75807 674 aaPredicted RBP31.87■■■□□ 2.69
AP1S1-203ENST00000443943 PROSER2Q86WR7 435 aaPredicted RBP31.87■■■□□ 2.69
AP1S1-203ENST00000443943 PPARGC1BQ86YN6 1023 aaKnown RBP31.87■■■□□ 2.69
AP1S1-203ENST00000443943 IQGAP3Q86VI3 1631 aa31.86■■■□□ 2.69
AP1S1-203ENST00000443943 PLEKHG1Q9ULL1 1385 aa31.86■■■□□ 2.69
AP1S1-203ENST00000443943 PHF23Q9BUL5 403 aaPredicted RBP31.86■■■□□ 2.69
AP1S1-203ENST00000443943 E9PCH4 1651 aa31.86■■■□□ 2.69
AP1S1-203ENST00000443943 RBM33Q96EV2 1170 aaKnown RBP31.85■■■□□ 2.69
AP1S1-203ENST00000443943 CHGAP10645 457 aaKnown RBP31.84■■■□□ 2.69
AP1S1-203ENST00000443943 MYO5BQ9ULV0 1848 aa31.84■■■□□ 2.69
AP1S1-203ENST00000443943 NUP155O75694 1391 aa31.82■■■□□ 2.69
AP1S1-203ENST00000443943 HDGFP51858 240 aaKnown RBP31.82■■■□□ 2.68
AP1S1-203ENST00000443943 FAM135BQ49AJ0 1406 aa31.82■■■□□ 2.68
AP1S1-203ENST00000443943 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.77■■■□□ 2.68
AP1S1-203ENST00000443943 MSH6P52701 1360 aa31.75■■■□□ 2.67
AP1S1-203ENST00000443943 NUTM2DQ5VT03 806 aaPredicted RBP31.73■■■□□ 2.67
AP1S1-203ENST00000443943 TBX22Q9Y458 520 aa31.72■■■□□ 2.67
AP1S1-203ENST00000443943 ROBO1Q9Y6N7 1651 aa31.72■■■□□ 2.67
AP1S1-203ENST00000443943 ADAMTS13Q76LX8 1427 aa31.69■■■□□ 2.66
AP1S1-203ENST00000443943 CHD2O14647 1828 aaKnown RBP31.69■■■□□ 2.66
AP1S1-203ENST00000443943 DIP2AQ14689 1571 aa31.67■■■□□ 2.66
AP1S1-203ENST00000443943 SLAIN2Q9P270 581 aa31.62■■■□□ 2.65
AP1S1-203ENST00000443943 RRBP1Q9P2E9 1410 aaKnown RBP31.62■■■□□ 2.65
AP1S1-203ENST00000443943 PIK3R4Q99570 1358 aa31.61■■■□□ 2.65
AP1S1-203ENST00000443943 NCOA3Q9Y6Q9 1424 aa31.6■■■□□ 2.65
AP1S1-203ENST00000443943 C14orf37Q86TY3 774 aa31.6■■■□□ 2.65
AP1S1-203ENST00000443943 SPHKAPQ2M3C7 1700 aa31.6■■■□□ 2.65
AP1S1-203ENST00000443943 TRPM2O94759 1503 aa31.59■■■□□ 2.65
AP1S1-203ENST00000443943 RGS17Q9UGC6 210 aaPredicted RBP31.56■■■□□ 2.64
AP1S1-203ENST00000443943 NAIPQ13075 1403 aa31.53■■■□□ 2.64
AP1S1-203ENST00000443943 ZNF326Q5BKZ1 582 aaKnown RBP31.53■■■□□ 2.64
AP1S1-203ENST00000443943 PTPRUQ92729 1446 aa31.52■■■□□ 2.64
AP1S1-203ENST00000443943 PHLPP1O60346 1717 aa31.52■■■□□ 2.64
AP1S1-203ENST00000443943 AMOTL2Q9Y2J4 779 aa31.51■■■□□ 2.63
AP1S1-203ENST00000443943 SETBP1Q9Y6X0 1596 aa31.5■■■□□ 2.63
AP1S1-203ENST00000443943 NRXN3Q9Y4C0 1643 aa31.49■■■□□ 2.63
AP1S1-203ENST00000443943 CADPS2Q86UW7 1296 aa31.49■■■□□ 2.63
AP1S1-203ENST00000443943 C19orf44Q9H6X5 657 aa31.49■■■□□ 2.63
AP1S1-203ENST00000443943 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.47■■■□□ 2.63
AP1S1-203ENST00000443943 JCADQ9P266 1359 aa31.47■■■□□ 2.63
AP1S1-203ENST00000443943 CLTCL1P53675 1640 aa31.47■■■□□ 2.63
AP1S1-203ENST00000443943 ATF3P18847 181 aa31.47■■■□□ 2.63
AP1S1-203ENST00000443943 COL16A1Q07092 1604 aaPredicted RBP31.45■■■□□ 2.62
AP1S1-203ENST00000443943 XRN1Q8IZH2 1706 aaKnown RBP31.43■■■□□ 2.62
AP1S1-203ENST00000443943 NEXMIFQ5QGS0 1516 aa31.42■■■□□ 2.62
AP1S1-203ENST00000443943 METP08581 1390 aa31.41■■■□□ 2.62
AP1S1-203ENST00000443943 HFM1A2PYH4 1435 aa31.41■■■□□ 2.62
AP1S1-203ENST00000443943 POTEAQ6S8J7 498 aa31.39■■■□□ 2.62
AP1S1-203ENST00000443943 TRIM52Q96A61 297 aa31.39■■■□□ 2.62
AP1S1-203ENST00000443943 DCCP43146 1447 aa31.38■■■□□ 2.61
AP1S1-203ENST00000443943 AHDC1Q5TGY3 1603 aaPredicted RBP31.38■■■□□ 2.61
AP1S1-203ENST00000443943 BRINP3Q76B58 766 aa31.33■■■□□ 2.61
AP1S1-203ENST00000443943 KIF1BO60333 1816 aa31.32■■■□□ 2.6
AP1S1-203ENST00000443943 SLC4A1APQ9BWU0 796 aaKnown RBP31.31■■■□□ 2.6
AP1S1-203ENST00000443943 SPATA31A6Q5VVP1 1343 aa31.3■■■□□ 2.6
AP1S1-203ENST00000443943 LRP6O75581 1613 aa31.3■■■□□ 2.6
AP1S1-203ENST00000443943 MST1RQ04912 1400 aa31.29■■■□□ 2.6
AP1S1-203ENST00000443943 ADGRL3Q9HAR2 1447 aa31.28■■■□□ 2.6
AP1S1-203ENST00000443943 ASXL1Q8IXJ9 1541 aa31.28■■■□□ 2.6
AP1S1-203ENST00000443943 SHPRHQ149N8 1683 aa31.25■■■□□ 2.59
AP1S1-203ENST00000443943 MEX3CQ5U5Q3 659 aaKnown RBP31.25■■■□□ 2.59
AP1S1-203ENST00000443943 VGFO15240 615 aaPredicted RBP31.24■■■□□ 2.59
AP1S1-203ENST00000443943 NALCNQ8IZF0 1738 aa31.21■■■□□ 2.59
AP1S1-203ENST00000443943 PTCH1Q13635 1447 aa31.2■■■□□ 2.59
AP1S1-203ENST00000443943 RPGRIP1LQ68CZ1 1315 aa31.2■■■□□ 2.58
AP1S1-203ENST00000443943 SETD1AO15047 1707 aaKnown RBP31.18■■■□□ 2.58
AP1S1-203ENST00000443943 NHSL1Q5SYE7 1610 aa31.16■■■□□ 2.58
AP1S1-203ENST00000443943 SETD5Q9C0A6 1442 aa31.16■■■□□ 2.58
AP1S1-203ENST00000443943 FOXD1Q16676 465 aa31.16■■■□□ 2.58
AP1S1-203ENST00000443943 ROBO2Q9HCK4 1378 aa31.15■■■□□ 2.58
AP1S1-203ENST00000443943 NUTM2BA6NNL0 878 aaPredicted RBP31.14■■■□□ 2.58
AP1S1-203ENST00000443943 NUTM2EB1AL46 878 aaPredicted RBP31.14■■■□□ 2.58
AP1S1-203ENST00000443943 NUTM2AQ8IVF1 878 aaPredicted RBP31.14■■■□□ 2.58
AP1S1-203ENST00000443943 ZNF772Q68DY9 489 aaPredicted RBP31.13■■■□□ 2.57
AP1S1-203ENST00000443943 PPLO60437 1756 aa31.12■■■□□ 2.57
AP1S1-203ENST00000443943 PRAG1Q86YV5 1406 aa31.12■■■□□ 2.57
AP1S1-203ENST00000443943 C1orf167Q5SNV9 1468 aa31.11■■■□□ 2.57
AP1S1-203ENST00000443943 DDX17Q92841 729 aaKnown RBP31.11■■■□□ 2.57
AP1S1-203ENST00000443943 CCDC144AA2RUR9 1427 aa31.1■■■□□ 2.57
AP1S1-203ENST00000443943 LRRC59Q96AG4 307 aaKnown RBP31.09■■■□□ 2.57
AP1S1-203ENST00000443943 PNPLA6Q8IY17 1366 aa31.05■■■□□ 2.56
AP1S1-203ENST00000443943 MPHOSPH9Q99550 1183 aa31.04■■■□□ 2.56
AP1S1-203ENST00000443943 ADGRF5Q8IZF2 1346 aa31.02■■■□□ 2.56
AP1S1-203ENST00000443943 SPATA31E1Q6ZUB1 1445 aa31.02■■■□□ 2.56
AP1S1-203ENST00000443943 RGL3Q3MIN7 710 aa31.02■■■□□ 2.56
AP1S1-203ENST00000443943 AFF2P51816 1311 aa31■■■□□ 2.55
AP1S1-203ENST00000443943 ORAI2Q96SN7 254 aa31■■■□□ 2.55
AP1S1-203ENST00000443943 ANKRD30BQ9BXX2 1392 aa30.97■■■□□ 2.55
AP1S1-203ENST00000443943 LAMC1P11047 1609 aa30.97■■■□□ 2.55
AP1S1-203ENST00000443943 RXRBP28702 533 aa30.96■■■□□ 2.55
AP1S1-203ENST00000443943 C8orf37Q96NL8 207 aa30.95■■■□□ 2.55
AP1S1-203ENST00000443943 CDC42BPGQ6DT37 1551 aa30.95■■■□□ 2.54
AP1S1-203ENST00000443943 SOS2Q07890 1332 aaPredicted RBP30.94■■■□□ 2.54
AP1S1-203ENST00000443943 IFT172Q9UG01 1749 aa30.93■■■□□ 2.54
AP1S1-203ENST00000443943 STK26Q9P289 416 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms