RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 ABCC10Q5T3U5 1492 aa13.71□□□□□ -0.21
CALD1-210ENST00000443197 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
CALD1-210ENST00000443197 KDM5BQ9UGL1 1544 aa13.69□□□□□ -0.22
CALD1-210ENST00000443197 SLC26A8Q96RN1 970 aa13.69□□□□□ -0.22
CALD1-210ENST00000443197 MBD5Q9P267 1494 aa13.69□□□□□ -0.22
CALD1-210ENST00000443197 CHD1O14646 1710 aa13.69□□□□□ -0.22
CALD1-210ENST00000443197 DENND4BO75064 1496 aaPredicted RBP13.68□□□□□ -0.22
CALD1-210ENST00000443197 RRP1P56182 461 aaKnown RBP13.68□□□□□ -0.22
CALD1-210ENST00000443197 DUOX2Q9NRD8 1548 aa13.68□□□□□ -0.22
CALD1-210ENST00000443197 ELL2O00472 640 aaPredicted RBP13.68□□□□□ -0.22
CALD1-210ENST00000443197 CEBPAP49715 358 aaPredicted RBP13.68□□□□□ -0.22
CALD1-210ENST00000443197 LTV1Q96GA3 475 aaPredicted RBP13.68□□□□□ -0.22
CALD1-210ENST00000443197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.68□□□□□ -0.22
CALD1-210ENST00000443197 ADGRL2O95490 1459 aa13.67□□□□□ -0.22
CALD1-210ENST00000443197 ERICH6BQ5W0A0 696 aa13.67□□□□□ -0.22
CALD1-210ENST00000443197 WAPLQ7Z5K2 1190 aa13.67□□□□□ -0.22
CALD1-210ENST00000443197 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
CALD1-210ENST00000443197 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
CALD1-210ENST00000443197 CABP1Q9NZU7 370 aa13.67□□□□□ -0.22
CALD1-210ENST00000443197 NOS1P29475 1434 aa13.66□□□□□ -0.22
CALD1-210ENST00000443197 UPF2Q9HAU5 1272 aaKnown RBP13.66□□□□□ -0.22
CALD1-210ENST00000443197 A0A0G2JS52 829 aa13.66□□□□□ -0.22
CALD1-210ENST00000443197 MYT1Q01538 1121 aa13.66□□□□□ -0.22
CALD1-210ENST00000443197 HAP1P54257 671 aaPredicted RBP13.65□□□□□ -0.22
CALD1-210ENST00000443197 CRBNQ96SW2 442 aa13.65□□□□□ -0.22
CALD1-210ENST00000443197 PRAG1Q86YV5 1406 aa13.65□□□□□ -0.22
CALD1-210ENST00000443197 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
CALD1-210ENST00000443197 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
CALD1-210ENST00000443197 HMOX1P09601 288 aa13.64□□□□□ -0.23
CALD1-210ENST00000443197 COG3Q96JB2 828 aa13.64□□□□□ -0.23
CALD1-210ENST00000443197 A2MP01023 1474 aa13.64□□□□□ -0.23
CALD1-210ENST00000443197 TESK2Q96S53 571 aa13.64□□□□□ -0.23
CALD1-210ENST00000443197 MYH16Q9H6N6 1097 aa13.64□□□□□ -0.23
CALD1-210ENST00000443197 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.23
CALD1-210ENST00000443197 SMC4Q9NTJ3 1288 aa13.63□□□□□ -0.23
CALD1-210ENST00000443197 NUTM2GQ5VZR2 741 aa13.63□□□□□ -0.23
CALD1-210ENST00000443197 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
CALD1-210ENST00000443197 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
CALD1-210ENST00000443197 DIAPH1O60610 1272 aaKnown RBP13.62□□□□□ -0.23
CALD1-210ENST00000443197 ZNF518AQ6AHZ1 1483 aa13.62□□□□□ -0.23
CALD1-210ENST00000443197 LRRIQ1Q96JM4 1722 aa13.62□□□□□ -0.23
CALD1-210ENST00000443197 AMPHP49418 695 aa13.61□□□□□ -0.23
CALD1-210ENST00000443197 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
CALD1-210ENST00000443197 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
CALD1-210ENST00000443197 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
CALD1-210ENST00000443197 GCC2Q8IWJ2 1684 aa13.61□□□□□ -0.23
CALD1-210ENST00000443197 TTC37Q6PGP7 1564 aa13.61□□□□□ -0.23
CALD1-210ENST00000443197 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
CALD1-210ENST00000443197 E9PSI1 815 aa13.6□□□□□ -0.23
CALD1-210ENST00000443197 ITPRIPQ8IWB1 547 aa13.6□□□□□ -0.23
CALD1-210ENST00000443197 SAMD9LQ8IVG5 1584 aa13.6□□□□□ -0.23
CALD1-210ENST00000443197 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
CALD1-210ENST00000443197 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
CALD1-210ENST00000443197 RIPK4P57078 832 aa13.59□□□□□ -0.23
CALD1-210ENST00000443197 RUNDC1Q96C34 613 aa13.59□□□□□ -0.23
CALD1-210ENST00000443197 CFAP65Q6ZU64 1925 aaKnown RBP13.59□□□□□ -0.23
CALD1-210ENST00000443197 NSD3Q9BZ95 1437 aa13.57□□□□□ -0.24
CALD1-210ENST00000443197 SCAF11Q99590 1463 aaKnown RBP13.57□□□□□ -0.24
CALD1-210ENST00000443197 HSP90AA1P07900 732 aaKnown RBP13.57□□□□□ -0.24
CALD1-210ENST00000443197 APBB1O00213 710 aa13.57□□□□□ -0.24
CALD1-210ENST00000443197 ARHGEF12Q9NZN5 1544 aa13.56□□□□□ -0.24
CALD1-210ENST00000443197 RBM33Q96EV2 1170 aaKnown RBP13.56□□□□□ -0.24
CALD1-210ENST00000443197 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
CALD1-210ENST00000443197 FBLN1P23142 703 aa13.56□□□□□ -0.24
CALD1-210ENST00000443197 BCAR3O75815 825 aa13.54□□□□□ -0.24
CALD1-210ENST00000443197 ARXQ96QS3 562 aa13.54□□□□□ -0.24
CALD1-210ENST00000443197 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
CALD1-210ENST00000443197 PER1O15534 1290 aaPredicted RBP13.53□□□□□ -0.24
CALD1-210ENST00000443197 MS4A1P11836 297 aa13.53□□□□□ -0.24
CALD1-210ENST00000443197 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
CALD1-210ENST00000443197 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
CALD1-210ENST00000443197 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
CALD1-210ENST00000443197 IPO8O15397 1037 aaKnown RBP13.52□□□□□ -0.24
CALD1-210ENST00000443197 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.24
CALD1-210ENST00000443197 CDC42BPAQ5VT25 1732 aa13.52□□□□□ -0.24
CALD1-210ENST00000443197 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
CALD1-210ENST00000443197 ARHGEF5Q12774 1597 aa13.51□□□□□ -0.25
CALD1-210ENST00000443197 MYO5CQ9NQX4 1742 aa13.51□□□□□ -0.25
CALD1-210ENST00000443197 NLRP6P59044 892 aa13.51□□□□□ -0.25
CALD1-210ENST00000443197 ZCCHC11Q5TAX3 1644 aaKnown RBP13.51□□□□□ -0.25
CALD1-210ENST00000443197 SPATA31E1Q6ZUB1 1445 aa13.51□□□□□ -0.25
CALD1-210ENST00000443197 ADGBQ8N7X0 1667 aa13.51□□□□□ -0.25
CALD1-210ENST00000443197 THEMISQ8N1K5 641 aaPredicted RBP13.5□□□□□ -0.25
CALD1-210ENST00000443197 UHRF1BP1Q6BDS2 1440 aa13.5□□□□□ -0.25
CALD1-210ENST00000443197 CALD1Q05682 793 aaKnown RBP13.5□□□□□ -0.25
CALD1-210ENST00000443197 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
CALD1-210ENST00000443197 UHRF1BP1LA0JNW5 1464 aa13.5□□□□□ -0.25
CALD1-210ENST00000443197 CSB-PGBD3P0DP91 1061 aa13.5□□□□□ -0.25
CALD1-210ENST00000443197 NUDT16Q96DE0 195 aaKnown RBP13.5□□□□□ -0.25
CALD1-210ENST00000443197 PSME1Q06323 249 aa13.49□□□□□ -0.25
CALD1-210ENST00000443197 SLC4A10Q6U841 1118 aa13.49□□□□□ -0.25
CALD1-210ENST00000443197 ANP32EQ9BTT0 268 aa13.49□□□□□ -0.25
CALD1-210ENST00000443197 NOP58Q9Y2X3 529 aaKnown RBP13.49□□□□□ -0.25
CALD1-210ENST00000443197 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
CALD1-210ENST00000443197 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
CALD1-210ENST00000443197 NME9Q86XW9 330 aa13.48□□□□□ -0.25
CALD1-210ENST00000443197 RWDD1Q9H446 243 aaPredicted RBP13.48□□□□□ -0.25
CALD1-210ENST00000443197 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
CALD1-210ENST00000443197 PREX2Q70Z35 1606 aa13.47□□□□□ -0.25
CALD1-210ENST00000443197 ZKSCAN2Q63HK3 967 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 403.8 ms