RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
PFDN4-202ENST00000441080 BHMG1C9JSJ3 638 aaPredicted RBP10.54□□□□□ -0.72
PFDN4-202ENST00000441080 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
PFDN4-202ENST00000441080 SULF1Q8IWU6 871 aa10.52□□□□□ -0.73
PFDN4-202ENST00000441080 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
PFDN4-202ENST00000441080 KRTAP3-2Q9BYR7 98 aa10.52□□□□□ -0.73
PFDN4-202ENST00000441080 HRO43593 1189 aa10.51□□□□□ -0.73
PFDN4-202ENST00000441080 HDGFP51858 240 aaKnown RBP10.51□□□□□ -0.73
PFDN4-202ENST00000441080 SWT1Q5T5J6 900 aaKnown RBP10.51□□□□□ -0.73
PFDN4-202ENST00000441080 STAC3Q96MF2 364 aa10.51□□□□□ -0.73
PFDN4-202ENST00000441080 DDX11L8A8MPP1 907 aa10.5□□□□□ -0.73
PFDN4-202ENST00000441080 BEGAINQ9BUH8 593 aa10.5□□□□□ -0.73
PFDN4-202ENST00000441080 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
PFDN4-202ENST00000441080 ZFRQ96KR1 1074 aaKnown RBP10.49□□□□□ -0.73
PFDN4-202ENST00000441080 SLC4A3P48751 1232 aa10.48□□□□□ -0.73
PFDN4-202ENST00000441080 SAMD7Q7Z3H4 446 aa10.48□□□□□ -0.73
PFDN4-202ENST00000441080 CDAN1Q8IWY9 1227 aa10.48□□□□□ -0.73
PFDN4-202ENST00000441080 GOLGA8CPA6NN73 597 aa10.47□□□□□ -0.73
PFDN4-202ENST00000441080 RDH13Q8NBN7 331 aa10.47□□□□□ -0.73
PFDN4-202ENST00000441080 CD46P15529 392 aa10.46□□□□□ -0.73
PFDN4-202ENST00000441080 RNF40O75150 1001 aa10.45□□□□□ -0.74
PFDN4-202ENST00000441080 RSPH4AQ5TD94 716 aa10.45□□□□□ -0.74
PFDN4-202ENST00000441080 SLF2Q8IX21 1173 aa10.45□□□□□ -0.74
PFDN4-202ENST00000441080 LRCH3Q96II8 777 aa10.44□□□□□ -0.74
PFDN4-202ENST00000441080 ANKK1Q8NFD2 765 aa10.43□□□□□ -0.74
PFDN4-202ENST00000441080 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
PFDN4-202ENST00000441080 SLC10A3P09131 477 aa10.41□□□□□ -0.74
PFDN4-202ENST00000441080 RSPH6AQ9H0K4 717 aa10.41□□□□□ -0.74
PFDN4-202ENST00000441080 WNT2BQ93097 391 aa10.4□□□□□ -0.74
PFDN4-202ENST00000441080 DIXDC1Q155Q3 683 aa10.39□□□□□ -0.75
PFDN4-202ENST00000441080 SH3D19Q5HYK7 790 aa10.39□□□□□ -0.75
PFDN4-202ENST00000441080 NUTM1Q86Y26 1132 aa10.39□□□□□ -0.75
PFDN4-202ENST00000441080 TBC1D2Q9BYX2 928 aa10.39□□□□□ -0.75
PFDN4-202ENST00000441080 SOWAHBA6NEL2 793 aa10.38□□□□□ -0.75
PFDN4-202ENST00000441080 GCGRP47871 477 aa10.38□□□□□ -0.75
PFDN4-202ENST00000441080 NECTIN2Q92692 538 aa10.38□□□□□ -0.75
PFDN4-202ENST00000441080 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
PFDN4-202ENST00000441080 CFHP08603 1231 aa10.37□□□□□ -0.75
PFDN4-202ENST00000441080 BCAMP50895 628 aa10.37□□□□□ -0.75
PFDN4-202ENST00000441080 SPIRE2Q8WWL2 714 aa10.37□□□□□ -0.75
PFDN4-202ENST00000441080 KDM4AO75164 1064 aa10.36□□□□□ -0.75
PFDN4-202ENST00000441080 MYSM1Q5VVJ2 828 aa10.36□□□□□ -0.75
PFDN4-202ENST00000441080 PCMTD1Q96MG8 357 aaPredicted RBP10.36□□□□□ -0.75
PFDN4-202ENST00000441080 SKIV2LQ15477 1246 aaKnown RBP10.35□□□□□ -0.75
PFDN4-202ENST00000441080 HPS5Q9UPZ3 1129 aa10.35□□□□□ -0.75
PFDN4-202ENST00000441080 PPP4CP60510 307 aa10.34□□□□□ -0.75
PFDN4-202ENST00000441080 KMT5BQ4FZB7 885 aa10.34□□□□□ -0.75
PFDN4-202ENST00000441080 POLR3EQ9NVU0 708 aa10.34□□□□□ -0.75
PFDN4-202ENST00000441080 GTF3C3Q9Y5Q9 886 aa10.34□□□□□ -0.75
PFDN4-202ENST00000441080 USP46P62068 366 aa10.33□□□□□ -0.76
PFDN4-202ENST00000441080 KCTD12Q96CX2 325 aaKnown RBP10.33□□□□□ -0.76
PFDN4-202ENST00000441080 TSR3Q9UJK0 312 aaKnown RBP10.33□□□□□ -0.76
PFDN4-202ENST00000441080 ATP1B4Q9UN42 357 aaPredicted RBP10.33□□□□□ -0.76
PFDN4-202ENST00000441080 CLK2P49760 499 aaKnown RBP10.32□□□□□ -0.76
PFDN4-202ENST00000441080 MOXD2PA6NHM9 499 aa10.31□□□□□ -0.76
PFDN4-202ENST00000441080 THSD4Q6ZMP0 1018 aa10.31□□□□□ -0.76
PFDN4-202ENST00000441080 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
PFDN4-202ENST00000441080 PRR14Q9BWN1 585 aa10.31□□□□□ -0.76
PFDN4-202ENST00000441080 PCDH10Q9P2E7 1040 aa10.31□□□□□ -0.76
PFDN4-202ENST00000441080 HOXA2O43364 376 aa10.3□□□□□ -0.76
PFDN4-202ENST00000441080 FUT2Q10981 343 aa10.3□□□□□ -0.76
PFDN4-202ENST00000441080 SPTLC1O15269 473 aa10.29□□□□□ -0.76
PFDN4-202ENST00000441080 NDUFV2P19404 249 aa10.29□□□□□ -0.76
PFDN4-202ENST00000441080 RSBN1LQ6PCB5 846 aaPredicted RBP10.29□□□□□ -0.76
PFDN4-202ENST00000441080 PROCA1Q8NCQ7 364 aaPredicted RBP10.29□□□□□ -0.76
PFDN4-202ENST00000441080 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
PFDN4-202ENST00000441080 GRIPAP1Q4V328 841 aa10.28□□□□□ -0.76
PFDN4-202ENST00000441080 MYT1LQ9UL68 1186 aa10.28□□□□□ -0.76
PFDN4-202ENST00000441080 ACTN4O43707 911 aaKnown RBP10.27□□□□□ -0.77
PFDN4-202ENST00000441080 WBP1LQ9NX94 342 aa10.27□□□□□ -0.77
PFDN4-202ENST00000441080 FDX1P10109 184 aa10.26□□□□□ -0.77
PFDN4-202ENST00000441080 GJA5P36382 358 aa10.26□□□□□ -0.77
PFDN4-202ENST00000441080 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
PFDN4-202ENST00000441080 APLP1P51693 650 aa10.26□□□□□ -0.77
PFDN4-202ENST00000441080 GUCA2AQ02747 115 aa10.25□□□□□ -0.77
PFDN4-202ENST00000441080 CSPP1Q1MSJ5 1256 aa10.25□□□□□ -0.77
PFDN4-202ENST00000441080 HLA-CQ95604 372 aa10.25□□□□□ -0.77
PFDN4-202ENST00000441080 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.25□□□□□ -0.77
PFDN4-202ENST00000441080 TUSC1Q2TAM9 212 aa10.24□□□□□ -0.77
PFDN4-202ENST00000441080 PTPN5P54829 565 aa10.23□□□□□ -0.77
PFDN4-202ENST00000441080 PUS10Q3MIT2 529 aaKnown RBP10.23□□□□□ -0.77
PFDN4-202ENST00000441080 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
PFDN4-202ENST00000441080 PCDHB3Q9Y5E6 796 aa10.22□□□□□ -0.77
PFDN4-202ENST00000441080 PCDHB15Q9Y5E8 787 aa10.22□□□□□ -0.77
PFDN4-202ENST00000441080 MORN1Q5T089 497 aa10.21□□□□□ -0.77
PFDN4-202ENST00000441080 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.77
PFDN4-202ENST00000441080 PCDHGC3Q9UN70 934 aa10.21□□□□□ -0.77
PFDN4-202ENST00000441080 QPCTQ16769 361 aa10.2□□□□□ -0.78
PFDN4-202ENST00000441080 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
PFDN4-202ENST00000441080 ZBTB3Q9H5J0 574 aa10.2□□□□□ -0.78
PFDN4-202ENST00000441080 NUTM2BA6NNL0 878 aaPredicted RBP10.19□□□□□ -0.78
PFDN4-202ENST00000441080 NUTM2EB1AL46 878 aaPredicted RBP10.19□□□□□ -0.78
PFDN4-202ENST00000441080 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
PFDN4-202ENST00000441080 PRPF38BQ5VTL8 546 aaKnown RBP10.19□□□□□ -0.78
PFDN4-202ENST00000441080 NUTM2AQ8IVF1 878 aaPredicted RBP10.19□□□□□ -0.78
PFDN4-202ENST00000441080 CABLES1Q8TDN4 633 aa10.19□□□□□ -0.78
PFDN4-202ENST00000441080 LILRB3O75022 631 aa10.18□□□□□ -0.78
PFDN4-202ENST00000441080 RNF166Q96A37 237 aaPredicted RBP10.18□□□□□ -0.78
PFDN4-202ENST00000441080 SLC27A5Q9Y2P5 690 aa10.18□□□□□ -0.78
PFDN4-202ENST00000441080 C6orf229H3BNL8 230 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms