RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 TMEM94Q12767 1356 aa26.74■■□□□ 1.87
DDR1-235ENST00000428153 PLEKHG1Q9ULL1 1385 aa26.74■■□□□ 1.87
DDR1-235ENST00000428153 SLC26A8Q96RN1 970 aa26.74■■□□□ 1.87
DDR1-235ENST00000428153 TMEM131LA2VDJ0 1609 aa26.74■■□□□ 1.87
DDR1-235ENST00000428153 IQGAP3Q86VI3 1631 aa26.74■■□□□ 1.87
DDR1-235ENST00000428153 RIMS2Q9UQ26 1411 aa26.71■■□□□ 1.87
DDR1-235ENST00000428153 E9PCH4 1651 aa26.7■■□□□ 1.87
DDR1-235ENST00000428153 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.69■■□□□ 1.86
DDR1-235ENST00000428153 MYO5BQ9ULV0 1848 aa26.69■■□□□ 1.86
DDR1-235ENST00000428153 PROSER2Q86WR7 435 aaPredicted RBP26.68■■□□□ 1.86
DDR1-235ENST00000428153 PPP1R15AO75807 674 aaPredicted RBP26.65■■□□□ 1.86
DDR1-235ENST00000428153 BCANQ96GW7 911 aa26.65■■□□□ 1.86
DDR1-235ENST00000428153 TBX22Q9Y458 520 aa26.65■■□□□ 1.86
DDR1-235ENST00000428153 NUP155O75694 1391 aa26.64■■□□□ 1.86
DDR1-235ENST00000428153 PHF23Q9BUL5 403 aaPredicted RBP26.64■■□□□ 1.86
DDR1-235ENST00000428153 CHD2O14647 1828 aaKnown RBP26.64■■□□□ 1.85
DDR1-235ENST00000428153 NCOA3Q9Y6Q9 1424 aa26.63■■□□□ 1.85
DDR1-235ENST00000428153 MSH6P52701 1360 aa26.62■■□□□ 1.85
DDR1-235ENST00000428153 DIP2AQ14689 1571 aa26.62■■□□□ 1.85
DDR1-235ENST00000428153 PIK3R4Q99570 1358 aa26.61■■□□□ 1.85
DDR1-235ENST00000428153 ROBO1Q9Y6N7 1651 aa26.57■■□□□ 1.84
DDR1-235ENST00000428153 CHGAP10645 457 aaKnown RBP26.57■■□□□ 1.84
DDR1-235ENST00000428153 ADAMTS13Q76LX8 1427 aa26.56■■□□□ 1.84
DDR1-235ENST00000428153 SENP3Q9H4L4 574 aaPredicted RBP26.56■■□□□ 1.84
DDR1-235ENST00000428153 ITGAEP38570 1179 aa26.54■■□□□ 1.84
DDR1-235ENST00000428153 RBM33Q96EV2 1170 aaKnown RBP26.53■■□□□ 1.84
DDR1-235ENST00000428153 RRBP1Q9P2E9 1410 aaKnown RBP26.53■■□□□ 1.84
DDR1-235ENST00000428153 SLAIN2Q9P270 581 aa26.52■■□□□ 1.84
DDR1-235ENST00000428153 SPHKAPQ2M3C7 1700 aa26.5■■□□□ 1.83
DDR1-235ENST00000428153 TRPM2O94759 1503 aa26.49■■□□□ 1.83
DDR1-235ENST00000428153 PPARGC1BQ86YN6 1023 aaKnown RBP26.45■■□□□ 1.82
DDR1-235ENST00000428153 NUTM2DQ5VT03 806 aaPredicted RBP26.44■■□□□ 1.82
DDR1-235ENST00000428153 CADPS2Q86UW7 1296 aa26.44■■□□□ 1.82
DDR1-235ENST00000428153 C19orf44Q9H6X5 657 aa26.44■■□□□ 1.82
DDR1-235ENST00000428153 SETBP1Q9Y6X0 1596 aa26.44■■□□□ 1.82
DDR1-235ENST00000428153 RGS17Q9UGC6 210 aaPredicted RBP26.43■■□□□ 1.82
DDR1-235ENST00000428153 NAIPQ13075 1403 aa26.42■■□□□ 1.82
DDR1-235ENST00000428153 PHLPP1O60346 1717 aa26.41■■□□□ 1.82
DDR1-235ENST00000428153 JCADQ9P266 1359 aa26.41■■□□□ 1.82
DDR1-235ENST00000428153 AMOTL2Q9Y2J4 779 aa26.4■■□□□ 1.82
DDR1-235ENST00000428153 DCCP43146 1447 aa26.39■■□□□ 1.82
DDR1-235ENST00000428153 NRXN3Q9Y4C0 1643 aa26.39■■□□□ 1.82
DDR1-235ENST00000428153 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.39■■□□□ 1.82
DDR1-235ENST00000428153 C14orf37Q86TY3 774 aa26.39■■□□□ 1.82
DDR1-235ENST00000428153 PTPRUQ92729 1446 aa26.39■■□□□ 1.81
DDR1-235ENST00000428153 ATF3P18847 181 aa26.37■■□□□ 1.81
DDR1-235ENST00000428153 XRN1Q8IZH2 1706 aaKnown RBP26.36■■□□□ 1.81
DDR1-235ENST00000428153 COL16A1Q07092 1604 aaPredicted RBP26.36■■□□□ 1.81
DDR1-235ENST00000428153 HFM1A2PYH4 1435 aa26.35■■□□□ 1.81
DDR1-235ENST00000428153 ZNF326Q5BKZ1 582 aaKnown RBP26.35■■□□□ 1.81
DDR1-235ENST00000428153 AHDC1Q5TGY3 1603 aaPredicted RBP26.35■■□□□ 1.81
DDR1-235ENST00000428153 CLTCL1P53675 1640 aa26.34■■□□□ 1.81
DDR1-235ENST00000428153 NEXMIFQ5QGS0 1516 aa26.33■■□□□ 1.81
DDR1-235ENST00000428153 KIF1BO60333 1816 aa26.31■■□□□ 1.8
DDR1-235ENST00000428153 SPATA31A6Q5VVP1 1343 aa26.3■■□□□ 1.8
DDR1-235ENST00000428153 METP08581 1390 aa26.28■■□□□ 1.8
DDR1-235ENST00000428153 POTEAQ6S8J7 498 aa26.26■■□□□ 1.79
DDR1-235ENST00000428153 BRINP3Q76B58 766 aa26.25■■□□□ 1.79
DDR1-235ENST00000428153 SHPRHQ149N8 1683 aa26.25■■□□□ 1.79
DDR1-235ENST00000428153 VGFO15240 615 aaPredicted RBP26.24■■□□□ 1.79
DDR1-235ENST00000428153 RPGRIP1LQ68CZ1 1315 aa26.23■■□□□ 1.79
DDR1-235ENST00000428153 ADGRL3Q9HAR2 1447 aa26.22■■□□□ 1.79
DDR1-235ENST00000428153 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
DDR1-235ENST00000428153 MST1RQ04912 1400 aa26.22■■□□□ 1.79
DDR1-235ENST00000428153 SLC4A1APQ9BWU0 796 aaKnown RBP26.21■■□□□ 1.79
DDR1-235ENST00000428153 PRAG1Q86YV5 1406 aa26.21■■□□□ 1.79
DDR1-235ENST00000428153 ASXL1Q8IXJ9 1541 aa26.2■■□□□ 1.79
DDR1-235ENST00000428153 PTCH1Q13635 1447 aa26.2■■□□□ 1.78
DDR1-235ENST00000428153 SETD5Q9C0A6 1442 aa26.18■■□□□ 1.78
DDR1-235ENST00000428153 LRP6O75581 1613 aa26.17■■□□□ 1.78
DDR1-235ENST00000428153 NHSL1Q5SYE7 1610 aa26.16■■□□□ 1.78
DDR1-235ENST00000428153 SETD1AO15047 1707 aaKnown RBP26.16■■□□□ 1.78
DDR1-235ENST00000428153 ZNF772Q68DY9 489 aaPredicted RBP26.14■■□□□ 1.78
DDR1-235ENST00000428153 NALCNQ8IZF0 1738 aa26.14■■□□□ 1.77
DDR1-235ENST00000428153 PPLO60437 1756 aa26.11■■□□□ 1.77
DDR1-235ENST00000428153 MEX3CQ5U5Q3 659 aaKnown RBP26.11■■□□□ 1.77
DDR1-235ENST00000428153 LRRC59Q96AG4 307 aaKnown RBP26.11■■□□□ 1.77
DDR1-235ENST00000428153 ACIN1Q9UKV3 1341 aaKnown RBP26.1■■□□□ 1.77
DDR1-235ENST00000428153 ROBO2Q9HCK4 1378 aa26.07■■□□□ 1.76
DDR1-235ENST00000428153 C1orf167Q5SNV9 1468 aa26.07■■□□□ 1.76
DDR1-235ENST00000428153 LAMC1P11047 1609 aa26.06■■□□□ 1.76
DDR1-235ENST00000428153 CCDC144AA2RUR9 1427 aa26.06■■□□□ 1.76
DDR1-235ENST00000428153 ANKRD30BQ9BXX2 1392 aa26.02■■□□□ 1.76
DDR1-235ENST00000428153 SPATA31E1Q6ZUB1 1445 aa26.02■■□□□ 1.76
DDR1-235ENST00000428153 PNPLA6Q8IY17 1366 aa26■■□□□ 1.75
DDR1-235ENST00000428153 MPHOSPH9Q99550 1183 aa26■■□□□ 1.75
DDR1-235ENST00000428153 CDK12Q9NYV4 1490 aaPredicted RBP25.98■■□□□ 1.75
DDR1-235ENST00000428153 SOS2Q07890 1332 aaPredicted RBP25.98■■□□□ 1.75
DDR1-235ENST00000428153 NUTM2BA6NNL0 878 aaPredicted RBP25.98■■□□□ 1.75
DDR1-235ENST00000428153 NUTM2EB1AL46 878 aaPredicted RBP25.98■■□□□ 1.75
DDR1-235ENST00000428153 FOXD1Q16676 465 aa25.98■■□□□ 1.75
DDR1-235ENST00000428153 NUTM2AQ8IVF1 878 aaPredicted RBP25.98■■□□□ 1.75
DDR1-235ENST00000428153 TECPR2O15040 1411 aa25.97■■□□□ 1.75
DDR1-235ENST00000428153 CDC42BPGQ6DT37 1551 aa25.96■■□□□ 1.75
DDR1-235ENST00000428153 RXRBP28702 533 aa25.96■■□□□ 1.75
DDR1-235ENST00000428153 IFT172Q9UG01 1749 aa25.96■■□□□ 1.75
DDR1-235ENST00000428153 ADGRF5Q8IZF2 1346 aa25.95■■□□□ 1.75
DDR1-235ENST00000428153 DDX17Q92841 729 aaKnown RBP25.95■■□□□ 1.74
DDR1-235ENST00000428153 AFF2P51816 1311 aa25.93■■□□□ 1.74
DDR1-235ENST00000428153 ORAI2Q96SN7 254 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms