RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
TTC39DP-201ENST00000416781 FAM117AQ9C073 453 aa9.29□□□□□ -0.92
TTC39DP-201ENST00000416781 SEPT9Q9UHD8 586 aaPredicted RBP9.29□□□□□ -0.92
TTC39DP-201ENST00000416781 MS4A1P11836 297 aa9.28□□□□□ -0.92
TTC39DP-201ENST00000416781 DDRGK1Q96HY6 314 aa9.28□□□□□ -0.92
TTC39DP-201ENST00000416781 NBPF3Q9H094 633 aa9.28□□□□□ -0.92
TTC39DP-201ENST00000416781 TK2O00142 265 aa9.27□□□□□ -0.93
TTC39DP-201ENST00000416781 TMEM134Q9H6X4 195 aa9.27□□□□□ -0.93
TTC39DP-201ENST00000416781 FAM217BQ9NTX9 383 aaPredicted RBP9.27□□□□□ -0.93
TTC39DP-201ENST00000416781 SSTR3P32745 418 aaPredicted RBP9.26□□□□□ -0.93
TTC39DP-201ENST00000416781 ADGRD1Q6QNK2 874 aa9.26□□□□□ -0.93
TTC39DP-201ENST00000416781 FAM98CQ17RN3 349 aaKnown RBP9.25□□□□□ -0.93
TTC39DP-201ENST00000416781 PLEKHG3A1L390 1219 aa9.23□□□□□ -0.93
TTC39DP-201ENST00000416781 ANKRD13DQ6ZTN6 518 aa9.23□□□□□ -0.93
TTC39DP-201ENST00000416781 LAPTM4BQ86VI4 370 aa9.23□□□□□ -0.93
TTC39DP-201ENST00000416781 SULF1Q8IWU6 871 aa9.23□□□□□ -0.93
TTC39DP-201ENST00000416781 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
TTC39DP-201ENST00000416781 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
TTC39DP-201ENST00000416781 BHMG1C9JSJ3 638 aaPredicted RBP9.22□□□□□ -0.93
TTC39DP-201ENST00000416781 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
TTC39DP-201ENST00000416781 MRPL50Q8N5N7 158 aaKnown RBP9.22□□□□□ -0.93
TTC39DP-201ENST00000416781 BEGAINQ9BUH8 593 aa9.22□□□□□ -0.93
TTC39DP-201ENST00000416781 HDGFP51858 240 aaKnown RBP9.21□□□□□ -0.93
TTC39DP-201ENST00000416781 PLA2G2EQ9NZK7 142 aa9.21□□□□□ -0.93
TTC39DP-201ENST00000416781 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
TTC39DP-201ENST00000416781 HRO43593 1189 aa9.19□□□□□ -0.94
TTC39DP-201ENST00000416781 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
TTC39DP-201ENST00000416781 SAMD7Q7Z3H4 446 aa9.19□□□□□ -0.94
TTC39DP-201ENST00000416781 RDH13Q8NBN7 331 aa9.19□□□□□ -0.94
TTC39DP-201ENST00000416781 CD46P15529 392 aa9.18□□□□□ -0.94
TTC39DP-201ENST00000416781 ZFRQ96KR1 1074 aaKnown RBP9.18□□□□□ -0.94
TTC39DP-201ENST00000416781 RNF40O75150 1001 aa9.17□□□□□ -0.94
TTC39DP-201ENST00000416781 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
TTC39DP-201ENST00000416781 RSPH4AQ5TD94 716 aa9.16□□□□□ -0.94
TTC39DP-201ENST00000416781 SLF2Q8IX21 1173 aa9.16□□□□□ -0.94
TTC39DP-201ENST00000416781 RSPH6AQ9H0K4 717 aa9.15□□□□□ -0.94
TTC39DP-201ENST00000416781 LRCH3Q96II8 777 aa9.14□□□□□ -0.95
TTC39DP-201ENST00000416781 GTF3C3Q9Y5Q9 886 aa9.14□□□□□ -0.95
TTC39DP-201ENST00000416781 SH3D19Q5HYK7 790 aa9.13□□□□□ -0.95
TTC39DP-201ENST00000416781 ANKK1Q8NFD2 765 aa9.13□□□□□ -0.95
TTC39DP-201ENST00000416781 GOPCQ9HD26 462 aa9.13□□□□□ -0.95
TTC39DP-201ENST00000416781 SLC10A3P09131 477 aa9.13□□□□□ -0.95
TTC39DP-201ENST00000416781 DIXDC1Q155Q3 683 aa9.13□□□□□ -0.95
TTC39DP-201ENST00000416781 NUTM1Q86Y26 1132 aa9.13□□□□□ -0.95
TTC39DP-201ENST00000416781 TBC1D2Q9BYX2 928 aa9.13□□□□□ -0.95
TTC39DP-201ENST00000416781 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.13□□□□□ -0.95
TTC39DP-201ENST00000416781 PCMTD1Q96MG8 357 aaPredicted RBP9.12□□□□□ -0.95
TTC39DP-201ENST00000416781 RANGAP1P46060 587 aaPredicted RBP9.11□□□□□ -0.95
TTC39DP-201ENST00000416781 MYSM1Q5VVJ2 828 aa9.11□□□□□ -0.95
TTC39DP-201ENST00000416781 SPIRE2Q8WWL2 714 aa9.11□□□□□ -0.95
TTC39DP-201ENST00000416781 CFHP08603 1231 aa9.1□□□□□ -0.95
TTC39DP-201ENST00000416781 GCGRP47871 477 aa9.1□□□□□ -0.95
TTC39DP-201ENST00000416781 SKIV2LQ15477 1246 aaKnown RBP9.1□□□□□ -0.95
TTC39DP-201ENST00000416781 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
TTC39DP-201ENST00000416781 WNT2BQ93097 391 aa9.1□□□□□ -0.95
TTC39DP-201ENST00000416781 ATP1B4Q9UN42 357 aaPredicted RBP9.1□□□□□ -0.95
TTC39DP-201ENST00000416781 KDM4AO75164 1064 aa9.09□□□□□ -0.95
TTC39DP-201ENST00000416781 NECTIN2Q92692 538 aa9.09□□□□□ -0.95
TTC39DP-201ENST00000416781 POLR3EQ9NVU0 708 aa9.09□□□□□ -0.95
TTC39DP-201ENST00000416781 HCSTQ9UBK5 93 aa9.09□□□□□ -0.95
TTC39DP-201ENST00000416781 CLK2P49760 499 aaKnown RBP9.08□□□□□ -0.96
TTC39DP-201ENST00000416781 BCAMP50895 628 aa9.08□□□□□ -0.96
TTC39DP-201ENST00000416781 SOWAHBA6NEL2 793 aa9.07□□□□□ -0.96
TTC39DP-201ENST00000416781 USP46P62068 366 aa9.07□□□□□ -0.96
TTC39DP-201ENST00000416781 KMT5BQ4FZB7 885 aa9.07□□□□□ -0.96
TTC39DP-201ENST00000416781 HPS5Q9UPZ3 1129 aa9.07□□□□□ -0.96
TTC39DP-201ENST00000416781 MOXD2PA6NHM9 499 aa9.05□□□□□ -0.96
TTC39DP-201ENST00000416781 HOXA2O43364 376 aa9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 PPP4CP60510 307 aa9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 RIC3Q7Z5B4 369 aa9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 PROCA1Q8NCQ7 364 aaPredicted RBP9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 LIMD1Q9UGP4 676 aa9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 SPTLC1O15269 473 aa9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 NDUFV2P19404 249 aa9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 FUT2Q10981 343 aa9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 RSBN1LQ6PCB5 846 aaPredicted RBP9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 KCTD12Q96CX2 325 aaKnown RBP9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 TSR3Q9UJK0 312 aaKnown RBP9.04□□□□□ -0.96
TTC39DP-201ENST00000416781 PRR14Q9BWN1 585 aa9.03□□□□□ -0.96
TTC39DP-201ENST00000416781 RGS20O76081 388 aa9.02□□□□□ -0.97
TTC39DP-201ENST00000416781 GRIPAP1Q4V328 841 aa9.02□□□□□ -0.97
TTC39DP-201ENST00000416781 THSD4Q6ZMP0 1018 aa9.02□□□□□ -0.97
TTC39DP-201ENST00000416781 CSPP1Q1MSJ5 1256 aa9.01□□□□□ -0.97
TTC39DP-201ENST00000416781 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.01□□□□□ -0.97
TTC39DP-201ENST00000416781 FDX1P10109 184 aa9□□□□□ -0.97
TTC39DP-201ENST00000416781 GJA5P36382 358 aa9□□□□□ -0.97
TTC39DP-201ENST00000416781 IRX2Q9BZI1 471 aaPredicted RBP9□□□□□ -0.97
TTC39DP-201ENST00000416781 ACTN4O43707 911 aaKnown RBP9□□□□□ -0.97
TTC39DP-201ENST00000416781 ATP6V1AP38606 617 aa9□□□□□ -0.97
TTC39DP-201ENST00000416781 GUCA2AQ02747 115 aa9□□□□□ -0.97
TTC39DP-201ENST00000416781 HLA-CQ95604 372 aa9□□□□□ -0.97
TTC39DP-201ENST00000416781 APLP1P51693 650 aa8.99□□□□□ -0.97
TTC39DP-201ENST00000416781 TUSC1Q2TAM9 212 aa8.99□□□□□ -0.97
TTC39DP-201ENST00000416781 WBP1LQ9NX94 342 aa8.99□□□□□ -0.97
TTC39DP-201ENST00000416781 PUS10Q3MIT2 529 aaKnown RBP8.97□□□□□ -0.97
TTC39DP-201ENST00000416781 PCDHB15Q9Y5E8 787 aa8.97□□□□□ -0.97
TTC39DP-201ENST00000416781 QPCTQ16769 361 aa8.97□□□□□ -0.97
TTC39DP-201ENST00000416781 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.98
TTC39DP-201ENST00000416781 PCDHB3Q9Y5E6 796 aa8.96□□□□□ -0.98
TTC39DP-201ENST00000416781 NUTM2BA6NNL0 878 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms