RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.71□□□□□ -0.69
PTPRK-209ENST00000415046 OATP04181 439 aa10.71□□□□□ -0.69
PTPRK-209ENST00000415046 PXYLP1Q8TE99 480 aa10.71□□□□□ -0.69
PTPRK-209ENST00000415046 FECHP22830 423 aa10.69□□□□□ -0.7
PTPRK-209ENST00000415046 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
PTPRK-209ENST00000415046 PRR14Q9BWN1 585 aa10.69□□□□□ -0.7
PTPRK-209ENST00000415046 GPIHBP1Q8IV16 184 aa10.68□□□□□ -0.7
PTPRK-209ENST00000415046 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
PTPRK-209ENST00000415046 COPS2P61201 443 aa10.63□□□□□ -0.71
PTPRK-209ENST00000415046 PCDHB3Q9Y5E6 796 aa10.63□□□□□ -0.71
PTPRK-209ENST00000415046 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
PTPRK-209ENST00000415046 CFHP08603 1231 aa10.62□□□□□ -0.71
PTPRK-209ENST00000415046 SLC10A3P09131 477 aa10.62□□□□□ -0.71
PTPRK-209ENST00000415046 KMT5BQ4FZB7 885 aa10.62□□□□□ -0.71
PTPRK-209ENST00000415046 ACTN4O43707 911 aaKnown RBP10.61□□□□□ -0.71
PTPRK-209ENST00000415046 BLOC1S3Q6QNY0 202 aa10.6□□□□□ -0.71
PTPRK-209ENST00000415046 ZPR1O75312 459 aa10.59□□□□□ -0.71
PTPRK-209ENST00000415046 PPP1R18Q6NYC8 613 aa10.59□□□□□ -0.71
PTPRK-209ENST00000415046 NKX2-3Q8TAU0 364 aa10.59□□□□□ -0.71
PTPRK-209ENST00000415046 IRX2Q9BZI1 471 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-209ENST00000415046 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-209ENST00000415046 PHOX2BQ99453 314 aa10.56□□□□□ -0.72
PTPRK-209ENST00000415046 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.56□□□□□ -0.72
PTPRK-209ENST00000415046 MAP2K5Q13163 448 aa10.55□□□□□ -0.72
PTPRK-209ENST00000415046 RSPH4AQ5TD94 716 aa10.55□□□□□ -0.72
PTPRK-209ENST00000415046 NLRP7Q8WX94 980 aa10.55□□□□□ -0.72
PTPRK-209ENST00000415046 GGCXP38435 758 aa10.53□□□□□ -0.72
PTPRK-209ENST00000415046 TLL1O43897 1013 aa10.52□□□□□ -0.73
PTPRK-209ENST00000415046 RDH13Q8NBN7 331 aa10.51□□□□□ -0.73
PTPRK-209ENST00000415046 TMUB1Q9BVT8 246 aa10.51□□□□□ -0.73
PTPRK-209ENST00000415046 DDX11L8A8MPP1 907 aa10.5□□□□□ -0.73
PTPRK-209ENST00000415046 NR1I2O75469 434 aa10.5□□□□□ -0.73
PTPRK-209ENST00000415046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPRK-209ENST00000415046 SULF1Q8IWU6 871 aa10.5□□□□□ -0.73
PTPRK-209ENST00000415046 PRKD2Q9BZL6 878 aa10.5□□□□□ -0.73
PTPRK-209ENST00000415046 IRF6O14896 467 aa10.49□□□□□ -0.73
PTPRK-209ENST00000415046 V9GY48 417 aaPredicted RBP10.49□□□□□ -0.73
PTPRK-209ENST00000415046 MINK1Q8N4C8 1332 aaPredicted RBP10.48□□□□□ -0.73
PTPRK-209ENST00000415046 ADH1BP00325 375 aa10.47□□□□□ -0.73
PTPRK-209ENST00000415046 GCGRP47871 477 aa10.46□□□□□ -0.73
PTPRK-209ENST00000415046 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
PTPRK-209ENST00000415046 RNF223E7ERA6 249 aa10.45□□□□□ -0.74
PTPRK-209ENST00000415046 FUT2Q10981 343 aa10.45□□□□□ -0.74
PTPRK-209ENST00000415046 LMOD2Q6P5Q4 547 aa10.45□□□□□ -0.74
PTPRK-209ENST00000415046 SCUBE3Q8IX30 993 aa10.45□□□□□ -0.74
PTPRK-209ENST00000415046 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
PTPRK-209ENST00000415046 MORN1Q5T089 497 aa10.44□□□□□ -0.74
PTPRK-209ENST00000415046 S1PR4O95977 384 aa10.43□□□□□ -0.74
PTPRK-209ENST00000415046 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
PTPRK-209ENST00000415046 ANKLE1Q8NAG6 615 aa10.42□□□□□ -0.74
PTPRK-209ENST00000415046 CD46P15529 392 aa10.41□□□□□ -0.74
PTPRK-209ENST00000415046 LAPTM4AQ15012 233 aa10.41□□□□□ -0.74
PTPRK-209ENST00000415046 MDM2Q00987 491 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-209ENST00000415046 SPSB2Q99619 263 aa10.4□□□□□ -0.74
PTPRK-209ENST00000415046 SLC6A16Q9GZN6 736 aa10.4□□□□□ -0.74
PTPRK-209ENST00000415046 EMID1Q96A84 441 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-209ENST00000415046 THAP11Q96EK4 314 aa10.39□□□□□ -0.75
PTPRK-209ENST00000415046 SLC27A5Q9Y2P5 690 aa10.38□□□□□ -0.75
PTPRK-209ENST00000415046 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-209ENST00000415046 GFRA3O60609 400 aa10.37□□□□□ -0.75
PTPRK-209ENST00000415046 GPCPD1Q9NPB8 672 aa10.36□□□□□ -0.75
PTPRK-209ENST00000415046 SALL2Q9Y467 1007 aaPredicted RBP10.36□□□□□ -0.75
PTPRK-209ENST00000415046 NRG2O14511 850 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-209ENST00000415046 ZMYND10O75800 440 aa10.35□□□□□ -0.75
PTPRK-209ENST00000415046 FMNL1O95466 1100 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-209ENST00000415046 CLCN1P35523 988 aa10.35□□□□□ -0.75
PTPRK-209ENST00000415046 SLC19A1P41440 591 aa10.35□□□□□ -0.75
PTPRK-209ENST00000415046 GRIPAP1Q4V328 841 aa10.35□□□□□ -0.75
PTPRK-209ENST00000415046 Q6ZNB5 142 aa10.35□□□□□ -0.75
PTPRK-209ENST00000415046 BARGINQ6ZT62 677 aa10.35□□□□□ -0.75
PTPRK-209ENST00000415046 ZC3H15Q8WU90 426 aaKnown RBP10.34□□□□□ -0.75
PTPRK-209ENST00000415046 KDM4AO75164 1064 aa10.33□□□□□ -0.76
PTPRK-209ENST00000415046 BRICD5Q6PL45 260 aa10.33□□□□□ -0.76
PTPRK-209ENST00000415046 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
PTPRK-209ENST00000415046 PLA2G2CQ5R387 149 aa10.32□□□□□ -0.76
PTPRK-209ENST00000415046 SPRYD7Q5W111 196 aa10.32□□□□□ -0.76
PTPRK-209ENST00000415046 FAM160A2Q8N612 972 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-209ENST00000415046 USP46P62068 366 aa10.31□□□□□ -0.76
PTPRK-209ENST00000415046 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
PTPRK-209ENST00000415046 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
PTPRK-209ENST00000415046 PDZRN3Q9UPQ7 1066 aa10.31□□□□□ -0.76
PTPRK-209ENST00000415046 MSS51Q4VC12 460 aa10.3□□□□□ -0.76
PTPRK-209ENST00000415046 KRI1Q8N9T8 703 aaKnown RBP10.3□□□□□ -0.76
PTPRK-209ENST00000415046 NISCHQ9Y2I1 1504 aa10.29□□□□□ -0.76
PTPRK-209ENST00000415046 Q3C1V9 767 aa10.29□□□□□ -0.76
PTPRK-209ENST00000415046 TRIM67Q6ZTA4 783 aa10.29□□□□□ -0.76
PTPRK-209ENST00000415046 ZNF598Q86UK7 904 aaKnown RBP10.29□□□□□ -0.76
PTPRK-209ENST00000415046 REPIN1Q9BWE0 567 aaKnown RBP10.29□□□□□ -0.76
PTPRK-209ENST00000415046 PRDM9Q9NQV7 894 aa10.29□□□□□ -0.76
PTPRK-209ENST00000415046 HOXA2O43364 376 aa10.28□□□□□ -0.76
PTPRK-209ENST00000415046 LCE2BO14633 110 aa10.27□□□□□ -0.77
PTPRK-209ENST00000415046 AMHR2Q16671 573 aa10.27□□□□□ -0.77
PTPRK-209ENST00000415046 FCF1Q9Y324 198 aaKnown RBP10.27□□□□□ -0.77
PTPRK-209ENST00000415046 ZNF697Q5TEC3 545 aa10.26□□□□□ -0.77
PTPRK-209ENST00000415046 HLA-CQ95604 372 aa10.26□□□□□ -0.77
PTPRK-209ENST00000415046 PRR20EP86478 221 aa10.25□□□□□ -0.77
PTPRK-209ENST00000415046 PRR20CP86479 221 aa10.25□□□□□ -0.77
PTPRK-209ENST00000415046 PRR20DP86480 221 aa10.25□□□□□ -0.77
PTPRK-209ENST00000415046 PRR20BP86481 221 aa10.25□□□□□ -0.77
PTPRK-209ENST00000415046 PRR20AP86496 221 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms