RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 CCDC82Q8N4S0 544 aa6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 ZHX3Q9H4I2 956 aa6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 LETM1O95202 739 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 MYCBPQ99417 103 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-204ENST00000410054 NUCKS1Q9H1E3 243 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-204ENST00000410054 GOLGA6L10A0A0M3HER8 536 aa6.42□□□□□ -1.38
R3HDM1-204ENST00000410054 GOLGA6L4A6NEF3 574 aa6.42□□□□□ -1.38
R3HDM1-204ENST00000410054 CT47B1P0C2W7 299 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-204ENST00000410054 MYCNP04198 464 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-204ENST00000410054 PPP6R1Q9UPN7 881 aa6.42□□□□□ -1.38
R3HDM1-204ENST00000410054 NPM3O75607 178 aaKnown RBP6.41□□□□□ -1.38
R3HDM1-204ENST00000410054 RINLQ6ZS11 566 aa6.41□□□□□ -1.38
R3HDM1-204ENST00000410054 CASQ1P31415 396 aa6.41□□□□□ -1.38
R3HDM1-204ENST00000410054 NBPF1Q3BBV0 1214 aa6.41□□□□□ -1.38
R3HDM1-204ENST00000410054 ZFYVE27Q5T4F4 411 aa6.41□□□□□ -1.38
R3HDM1-204ENST00000410054 APBB1IPQ7Z5R6 666 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-204ENST00000410054 CCDC180Q9P1Z9 1646 aa6.41□□□□□ -1.38
R3HDM1-204ENST00000410054 ACRBPQ8NEB7 543 aa6.41□□□□□ -1.38
R3HDM1-204ENST00000410054 FANCIQ9NVI1 1328 aa6.4□□□□□ -1.38
R3HDM1-204ENST00000410054 GRIPAP1Q4V328 841 aa6.4□□□□□ -1.38
R3HDM1-204ENST00000410054 SEPT11Q9NVA2 429 aaKnown RBP6.4□□□□□ -1.38
R3HDM1-204ENST00000410054 MFSD4BQ5TF39 518 aa6.4□□□□□ -1.38
R3HDM1-204ENST00000410054 MPNDQ8N594 471 aa6.4□□□□□ -1.38
R3HDM1-204ENST00000410054 GBP4Q96PP9 640 aa6.4□□□□□ -1.38
R3HDM1-204ENST00000410054 RUFY1Q96T51 708 aa6.4□□□□□ -1.39
R3HDM1-204ENST00000410054 TCHPQ9BT92 498 aa6.4□□□□□ -1.39
R3HDM1-204ENST00000410054 GOPCQ9HD26 462 aa6.4□□□□□ -1.39
R3HDM1-204ENST00000410054 PNMA2Q9UL42 364 aa6.4□□□□□ -1.39
R3HDM1-204ENST00000410054 GBP2P32456 591 aaPredicted RBP6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 PPP4R3BQ5MIZ7 849 aa6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 TIGD1Q96MW7 591 aa6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 KIF20AO95235 890 aa6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 CCDC173Q0VFZ6 552 aa6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 ZRSR1Q15695 479 aaKnown RBP6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 CT47A1Q5JQC4 288 aaPredicted RBP6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 SMAP1Q8IYB5 467 aaPredicted RBP6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 TMTC2Q8N394 836 aa6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 ANAPC4Q9UJX5 808 aa6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 ZNF777Q9ULD5 760 aaPredicted RBP6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 hCG_2014768A0A024R1R8 64 aa6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 KIF5CO60282 957 aa6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 HSP90AB1P08238 724 aaKnown RBP6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 HSPA5P11021 654 aaKnown RBP6.39□□□□□ -1.39
R3HDM1-204ENST00000410054 ZCCHC6Q5VYS8 1495 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-204ENST00000410054 TERF1P54274 439 aa6.38□□□□□ -1.39
R3HDM1-204ENST00000410054 CDR1P51861 262 aa6.38□□□□□ -1.39
R3HDM1-204ENST00000410054 LEKR1Q6ZMV7 388 aa6.38□□□□□ -1.39
R3HDM1-204ENST00000410054 NBPF11Q86T75 865 aa6.38□□□□□ -1.39
R3HDM1-204ENST00000410054 DDX12PQ92771 950 aa6.38□□□□□ -1.39
R3HDM1-204ENST00000410054 ZNF853P0CG23 659 aa6.38□□□□□ -1.39
R3HDM1-204ENST00000410054 CCDC91Q7Z6B0 441 aa6.38□□□□□ -1.39
R3HDM1-204ENST00000410054 TCEAL9Q9UHQ7 104 aa6.38□□□□□ -1.39
R3HDM1-204ENST00000410054 DYTNA2CJ06 578 aa6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 MAP2K1Q02750 393 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 DBN1Q16643 649 aa6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 RNF168Q8IYW5 571 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 PIAS4Q8N2W9 510 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 STAC3Q96MF2 364 aa6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 SPINK5Q9NQ38 1064 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 NBPF9Q3BBW0 867 aa6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 CC2D1AQ6P1N0 951 aaPredicted RBP6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 GTPBP4Q9BZE4 634 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 AP1ARQ63HQ0 302 aa6.37□□□□□ -1.39
R3HDM1-204ENST00000410054 IPO7O95373 1038 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 PPP4R3CPQ6ZMV5 832 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 NECTIN2Q92692 538 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 ZNF500O60304 480 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 INF2Q27J81 1249 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 MKL2Q9ULH7 1088 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 TSPY2A6NKD2 308 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 TSPY3P0CV98 308 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 TSPY8P0CW00 308 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 TSPY1Q01534 308 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 ZNF280DQ6N043 979 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 ATP6V1E2Q96A05 226 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 MPP4Q96JB8 637 aa6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 ZMAT2Q96NC0 199 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-204ENST00000410054 IGBP1P78318 339 aa6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 KCNA1Q09470 495 aa6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 WDR75Q8IWA0 830 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 ATICP31939 592 aa6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 ZBTB17Q13105 803 aa6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 NBPF20Q3BBV1 942 aa6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 GET4Q7L5D6 327 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 PABPN1Q86U42 306 aaKnown RBP eCLIP6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 KIAA0754O94854 1291 aa6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 SESN3P58005 492 aa6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 INCENPQ9NQS7 918 aa6.35□□□□□ -1.39
R3HDM1-204ENST00000410054 NBPF7P0C2Y1 421 aaPredicted RBP6.34□□□□□ -1.39
R3HDM1-204ENST00000410054 SATB1Q01826 763 aa6.34□□□□□ -1.39
R3HDM1-204ENST00000410054 MICAL1Q8TDZ2 1067 aa6.34□□□□□ -1.39
R3HDM1-204ENST00000410054 MAP2K2P36507 400 aa6.34□□□□□ -1.39
R3HDM1-204ENST00000410054 USP5P45974 858 aa6.34□□□□□ -1.39
R3HDM1-204ENST00000410054 PPFIA3O75145 1194 aa6.34□□□□□ -1.39
R3HDM1-204ENST00000410054 SPOCK3Q9BQ16 436 aa6.34□□□□□ -1.39
R3HDM1-204ENST00000410054 USP25Q9UHP3 1055 aa6.34□□□□□ -1.39
R3HDM1-204ENST00000410054 IKBKGQ9Y6K9 419 aa6.34□□□□□ -1.39
R3HDM1-204ENST00000410054 RPUSD2Q8IZ73 545 aaKnown RBP6.34□□□□□ -1.4
R3HDM1-204ENST00000410054 LIMCH1Q9UPQ0 1083 aa6.34□□□□□ -1.4
R3HDM1-204ENST00000410054 PPM1FP49593 454 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms