RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 GSE1Q14687 1217 aa17.26■□□□□ 0.35
GSE1-203ENST00000405402 BACH2Q9BYV9 841 aa17.26■□□□□ 0.35
GSE1-203ENST00000405402 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
GSE1-203ENST00000405402 CHMP4BQ9H444 224 aaKnown RBP17.25■□□□□ 0.35
GSE1-203ENST00000405402 PTMAP06454 111 aaKnown RBP17.25■□□□□ 0.35
GSE1-203ENST00000405402 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
GSE1-203ENST00000405402 ROCK1Q13464 1354 aa17.25■□□□□ 0.35
GSE1-203ENST00000405402 NFKBIBQ15653 356 aa17.24■□□□□ 0.35
GSE1-203ENST00000405402 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
GSE1-203ENST00000405402 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
GSE1-203ENST00000405402 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
GSE1-203ENST00000405402 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
GSE1-203ENST00000405402 LNPKQ9C0E8 428 aa17.24■□□□□ 0.35
GSE1-203ENST00000405402 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
GSE1-203ENST00000405402 DZIP1LQ8IYY4 767 aaKnown RBP17.24■□□□□ 0.35
GSE1-203ENST00000405402 RPRD2Q5VT52 1461 aaKnown RBP17.22■□□□□ 0.35
GSE1-203ENST00000405402 THOC2Q8NI27 1593 aaKnown RBP17.22■□□□□ 0.35
GSE1-203ENST00000405402 SCAPERQ9BY12 1400 aa17.22■□□□□ 0.35
GSE1-203ENST00000405402 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
GSE1-203ENST00000405402 IFT140Q96RY7 1462 aa17.21■□□□□ 0.35
GSE1-203ENST00000405402 DIAPH1O60610 1272 aaKnown RBP17.21■□□□□ 0.34
GSE1-203ENST00000405402 NECTIN2Q92692 538 aa17.2■□□□□ 0.34
GSE1-203ENST00000405402 KCNJ4P48050 445 aa17.2■□□□□ 0.34
GSE1-203ENST00000405402 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
GSE1-203ENST00000405402 FRAT2O75474 233 aaPredicted RBP17.19■□□□□ 0.34
GSE1-203ENST00000405402 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
GSE1-203ENST00000405402 ERBINQ96RT1 1412 aa17.19■□□□□ 0.34
GSE1-203ENST00000405402 FOXD4L6Q3SYB3 417 aaPredicted RBP17.18■□□□□ 0.34
GSE1-203ENST00000405402 DNTTIP2Q5QJE6 756 aaKnown RBP17.18■□□□□ 0.34
GSE1-203ENST00000405402 FOXD4L3Q6VB84 417 aaPredicted RBP17.18■□□□□ 0.34
GSE1-203ENST00000405402 EXOSC9Q06265 439 aaKnown RBP17.18■□□□□ 0.34
GSE1-203ENST00000405402 NGDNQ8NEJ9 315 aaKnown RBP17.18■□□□□ 0.34
GSE1-203ENST00000405402 IL27Q8NEV9 243 aa17.18■□□□□ 0.34
GSE1-203ENST00000405402 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
GSE1-203ENST00000405402 L1TD1Q5T7N2 865 aaKnown RBP17.17■□□□□ 0.34
GSE1-203ENST00000405402 HDGFP51858 240 aaKnown RBP17.17■□□□□ 0.34
GSE1-203ENST00000405402 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
GSE1-203ENST00000405402 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
GSE1-203ENST00000405402 GOLGA6L3A6NEY3 463 aa17.15■□□□□ 0.34
GSE1-203ENST00000405402 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.34
GSE1-203ENST00000405402 AMPHP49418 695 aa17.14■□□□□ 0.33
GSE1-203ENST00000405402 BRPF3Q9ULD4 1205 aa17.14■□□□□ 0.33
GSE1-203ENST00000405402 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
GSE1-203ENST00000405402 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
GSE1-203ENST00000405402 CUL7Q14999 1698 aa17.14■□□□□ 0.33
GSE1-203ENST00000405402 NAP1L2Q9ULW6 460 aaPredicted RBP17.14■□□□□ 0.33
GSE1-203ENST00000405402 COG3Q96JB2 828 aa17.13■□□□□ 0.33
GSE1-203ENST00000405402 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
GSE1-203ENST00000405402 GBP4Q96PP9 640 aa17.13■□□□□ 0.33
GSE1-203ENST00000405402 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
GSE1-203ENST00000405402 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
GSE1-203ENST00000405402 DISP3Q9P2K9 1392 aa17.12■□□□□ 0.33
GSE1-203ENST00000405402 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
GSE1-203ENST00000405402 SLFN5Q08AF3 891 aa17.11■□□□□ 0.33
GSE1-203ENST00000405402 ARID3AQ99856 593 aa17.11■□□□□ 0.33
GSE1-203ENST00000405402 FGD1P98174 961 aa17.1■□□□□ 0.33
GSE1-203ENST00000405402 GLIPR1L2Q4G1C9 344 aa17.1■□□□□ 0.33
GSE1-203ENST00000405402 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
GSE1-203ENST00000405402 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
GSE1-203ENST00000405402 WWC1Q8IX03 1113 aa17.1■□□□□ 0.33
GSE1-203ENST00000405402 GPATCH8Q9UKJ3 1502 aaKnown RBP17.09■□□□□ 0.33
GSE1-203ENST00000405402 PRKAR2BP31323 418 aa17.09■□□□□ 0.33
GSE1-203ENST00000405402 NUTM2GQ5VZR2 741 aa17.09■□□□□ 0.33
GSE1-203ENST00000405402 C22orf23Q9BZE7 217 aa17.09■□□□□ 0.33
GSE1-203ENST00000405402 CABP1Q9NZU7 370 aa17.08■□□□□ 0.33
GSE1-203ENST00000405402 PLEKHH2Q8IVE3 1493 aa17.08■□□□□ 0.32
GSE1-203ENST00000405402 UGGT2Q9NYU1 1516 aa17.08■□□□□ 0.32
GSE1-203ENST00000405402 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
GSE1-203ENST00000405402 THUMPD2Q9BTF0 503 aaKnown RBP17.07■□□□□ 0.32
GSE1-203ENST00000405402 FAM69CQ0P6D2 419 aa17.07■□□□□ 0.32
GSE1-203ENST00000405402 DUSP27Q5VZP5 1158 aa17.06■□□□□ 0.32
GSE1-203ENST00000405402 NOB1Q9ULX3 412 aaKnown RBP17.06■□□□□ 0.32
GSE1-203ENST00000405402 STAC3Q96MF2 364 aa17.06■□□□□ 0.32
GSE1-203ENST00000405402 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
GSE1-203ENST00000405402 MCCP23508 829 aa17.05■□□□□ 0.32
GSE1-203ENST00000405402 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
GSE1-203ENST00000405402 NUP153P49790 1475 aaKnown RBP17.04■□□□□ 0.32
GSE1-203ENST00000405402 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
GSE1-203ENST00000405402 FBLN1P23142 703 aa17.04■□□□□ 0.32
GSE1-203ENST00000405402 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
GSE1-203ENST00000405402 NGEFQ8N5V2 710 aa17.04■□□□□ 0.32
GSE1-203ENST00000405402 CCDC141Q6ZP82 1450 aa17.04■□□□□ 0.32
GSE1-203ENST00000405402 TXNDC2Q86VQ3 553 aa17.03■□□□□ 0.32
GSE1-203ENST00000405402 KIAA1211Q6ZU35 1233 aa17.03■□□□□ 0.32
GSE1-203ENST00000405402 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
GSE1-203ENST00000405402 MSNP26038 577 aaKnown RBP17.03■□□□□ 0.32
GSE1-203ENST00000405402 HMMRO75330 724 aa17.02■□□□□ 0.32
GSE1-203ENST00000405402 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
GSE1-203ENST00000405402 CCDC9Q9Y3X0 531 aaKnown RBP17.02■□□□□ 0.32
GSE1-203ENST00000405402 CDK19Q9BWU1 502 aa17■□□□□ 0.31
GSE1-203ENST00000405402 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
GSE1-203ENST00000405402 GOLGA6L4A6NEF3 574 aa16.99■□□□□ 0.31
GSE1-203ENST00000405402 EID1Q9Y6B2 187 aa16.99■□□□□ 0.31
GSE1-203ENST00000405402 IGHDP01880 384 aa16.99■□□□□ 0.31
GSE1-203ENST00000405402 RRS1Q15050 365 aaKnown RBP16.98■□□□□ 0.31
GSE1-203ENST00000405402 TESK2Q96S53 571 aa16.98■□□□□ 0.31
GSE1-203ENST00000405402 CHMP5Q9NZZ3 219 aa16.98■□□□□ 0.31
GSE1-203ENST00000405402 KIF16BQ96L93 1317 aa16.98■□□□□ 0.31
GSE1-203ENST00000405402 FKBP5Q13451 457 aaPredicted RBP16.98■□□□□ 0.31
GSE1-203ENST00000405402 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms