RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 ADGRB3O60242 1522 aa10.54□□□□□ -0.72
SUMO3-202ENST00000397893 TRIM26Q12899 539 aaPredicted RBP10.54□□□□□ -0.72
SUMO3-202ENST00000397893 MED1Q15648 1581 aaPredicted RBP10.54□□□□□ -0.72
SUMO3-202ENST00000397893 FAM135BQ49AJ0 1406 aa10.53□□□□□ -0.72
SUMO3-202ENST00000397893 PLEKHG1Q9ULL1 1385 aa10.52□□□□□ -0.72
SUMO3-202ENST00000397893 RBM33Q96EV2 1170 aaKnown RBP10.52□□□□□ -0.73
SUMO3-202ENST00000397893 UNC13BO14795 1591 aa10.52□□□□□ -0.73
SUMO3-202ENST00000397893 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
SUMO3-202ENST00000397893 RIMS2Q9UQ26 1411 aa10.51□□□□□ -0.73
SUMO3-202ENST00000397893 PROSER2Q86WR7 435 aaPredicted RBP10.51□□□□□ -0.73
SUMO3-202ENST00000397893 RGS17Q9UGC6 210 aaPredicted RBP10.51□□□□□ -0.73
SUMO3-202ENST00000397893 TBX22Q9Y458 520 aa10.51□□□□□ -0.73
SUMO3-202ENST00000397893 NWD1Q149M9 1564 aa10.5□□□□□ -0.73
SUMO3-202ENST00000397893 ADAMTS13Q76LX8 1427 aa10.5□□□□□ -0.73
SUMO3-202ENST00000397893 NKTRP30414 1462 aaKnown RBP10.49□□□□□ -0.73
SUMO3-202ENST00000397893 TMEM131LA2VDJ0 1609 aa10.49□□□□□ -0.73
SUMO3-202ENST00000397893 PPARGC1BQ86YN6 1023 aaKnown RBP10.49□□□□□ -0.73
SUMO3-202ENST00000397893 NUP155O75694 1391 aa10.49□□□□□ -0.73
SUMO3-202ENST00000397893 HDGFP51858 240 aaKnown RBP10.48□□□□□ -0.73
SUMO3-202ENST00000397893 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.48□□□□□ -0.73
SUMO3-202ENST00000397893 PPP1R15AO75807 674 aaPredicted RBP10.46□□□□□ -0.73
SUMO3-202ENST00000397893 ZEB1P37275 1124 aaPredicted RBP10.46□□□□□ -0.73
SUMO3-202ENST00000397893 ITGAEP38570 1179 aa10.46□□□□□ -0.73
SUMO3-202ENST00000397893 NUTM2DQ5VT03 806 aaPredicted RBP10.46□□□□□ -0.73
SUMO3-202ENST00000397893 BCANQ96GW7 911 aa10.46□□□□□ -0.73
SUMO3-202ENST00000397893 SLC4A1APQ9BWU0 796 aaKnown RBP10.46□□□□□ -0.73
SUMO3-202ENST00000397893 SLAIN2Q9P270 581 aa10.46□□□□□ -0.73
SUMO3-202ENST00000397893 IQGAP3Q86VI3 1631 aa10.46□□□□□ -0.74
SUMO3-202ENST00000397893 E9PCH4 1651 aa10.46□□□□□ -0.74
SUMO3-202ENST00000397893 GCC2Q8IWJ2 1684 aa10.45□□□□□ -0.74
SUMO3-202ENST00000397893 NCOA3Q9Y6Q9 1424 aa10.45□□□□□ -0.74
SUMO3-202ENST00000397893 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
SUMO3-202ENST00000397893 PTPRUQ92729 1446 aa10.44□□□□□ -0.74
SUMO3-202ENST00000397893 RRBP1Q9P2E9 1410 aaKnown RBP10.44□□□□□ -0.74
SUMO3-202ENST00000397893 MSH6P52701 1360 aa10.44□□□□□ -0.74
SUMO3-202ENST00000397893 PIK3R4Q99570 1358 aa10.44□□□□□ -0.74
SUMO3-202ENST00000397893 MYO5BQ9ULV0 1848 aa10.42□□□□□ -0.74
SUMO3-202ENST00000397893 AMOTL2Q9Y2J4 779 aa10.42□□□□□ -0.74
SUMO3-202ENST00000397893 CHD2O14647 1828 aaKnown RBP10.42□□□□□ -0.74
SUMO3-202ENST00000397893 NAIPQ13075 1403 aa10.41□□□□□ -0.74
SUMO3-202ENST00000397893 POTEAQ6S8J7 498 aa10.41□□□□□ -0.74
SUMO3-202ENST00000397893 C19orf44Q9H6X5 657 aa10.41□□□□□ -0.74
SUMO3-202ENST00000397893 ROBO1Q9Y6N7 1651 aa10.41□□□□□ -0.74
SUMO3-202ENST00000397893 METP08581 1390 aa10.39□□□□□ -0.75
SUMO3-202ENST00000397893 DIP2AQ14689 1571 aa10.39□□□□□ -0.75
SUMO3-202ENST00000397893 JCADQ9P266 1359 aa10.39□□□□□ -0.75
SUMO3-202ENST00000397893 PPP4R3CPQ6ZMV5 832 aa10.38□□□□□ -0.75
SUMO3-202ENST00000397893 CADPS2Q86UW7 1296 aa10.38□□□□□ -0.75
SUMO3-202ENST00000397893 NRXN3Q9Y4C0 1643 aa10.37□□□□□ -0.75
SUMO3-202ENST00000397893 SETBP1Q9Y6X0 1596 aa10.37□□□□□ -0.75
SUMO3-202ENST00000397893 TRPM2O94759 1503 aa10.37□□□□□ -0.75
SUMO3-202ENST00000397893 HFM1A2PYH4 1435 aa10.36□□□□□ -0.75
SUMO3-202ENST00000397893 ATF3P18847 181 aa10.36□□□□□ -0.75
SUMO3-202ENST00000397893 BRINP3Q76B58 766 aa10.36□□□□□ -0.75
SUMO3-202ENST00000397893 COL16A1Q07092 1604 aaPredicted RBP10.36□□□□□ -0.75
SUMO3-202ENST00000397893 DCCP43146 1447 aa10.35□□□□□ -0.75
SUMO3-202ENST00000397893 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
SUMO3-202ENST00000397893 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
SUMO3-202ENST00000397893 NEXMIFQ5QGS0 1516 aa10.34□□□□□ -0.75
SUMO3-202ENST00000397893 CLTCL1P53675 1640 aa10.34□□□□□ -0.75
SUMO3-202ENST00000397893 AHDC1Q5TGY3 1603 aaPredicted RBP10.34□□□□□ -0.75
SUMO3-202ENST00000397893 XRN1Q8IZH2 1706 aaKnown RBP10.34□□□□□ -0.75
SUMO3-202ENST00000397893 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.34□□□□□ -0.75
SUMO3-202ENST00000397893 SPATA31A6Q5VVP1 1343 aa10.33□□□□□ -0.76
SUMO3-202ENST00000397893 MST1RQ04912 1400 aa10.33□□□□□ -0.76
SUMO3-202ENST00000397893 LRP6O75581 1613 aa10.33□□□□□ -0.76
SUMO3-202ENST00000397893 SPHKAPQ2M3C7 1700 aa10.33□□□□□ -0.76
SUMO3-202ENST00000397893 NCBP3Q53F19 620 aaKnown RBP10.32□□□□□ -0.76
SUMO3-202ENST00000397893 ADGRL3Q9HAR2 1447 aa10.32□□□□□ -0.76
SUMO3-202ENST00000397893 RPGRIP1LQ68CZ1 1315 aa10.32□□□□□ -0.76
SUMO3-202ENST00000397893 PHLPP1O60346 1717 aa10.31□□□□□ -0.76
SUMO3-202ENST00000397893 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
SUMO3-202ENST00000397893 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
SUMO3-202ENST00000397893 PRAG1Q86YV5 1406 aa10.31□□□□□ -0.76
SUMO3-202ENST00000397893 SETD5Q9C0A6 1442 aa10.31□□□□□ -0.76
SUMO3-202ENST00000397893 ROBO2Q9HCK4 1378 aa10.3□□□□□ -0.76
SUMO3-202ENST00000397893 ASXL1Q8IXJ9 1541 aa10.29□□□□□ -0.76
SUMO3-202ENST00000397893 DDX17Q92841 729 aaKnown RBP10.29□□□□□ -0.76
SUMO3-202ENST00000397893 PTCH1Q13635 1447 aa10.28□□□□□ -0.76
SUMO3-202ENST00000397893 SPATA31E1Q6ZUB1 1445 aa10.27□□□□□ -0.77
SUMO3-202ENST00000397893 C1orf167Q5SNV9 1468 aa10.27□□□□□ -0.77
SUMO3-202ENST00000397893 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
SUMO3-202ENST00000397893 ZNF772Q68DY9 489 aaPredicted RBP10.26□□□□□ -0.77
SUMO3-202ENST00000397893 LRRC59Q96AG4 307 aaKnown RBP10.26□□□□□ -0.77
SUMO3-202ENST00000397893 ORAI2Q96SN7 254 aa10.26□□□□□ -0.77
SUMO3-202ENST00000397893 MPHOSPH9Q99550 1183 aa10.26□□□□□ -0.77
SUMO3-202ENST00000397893 SETD1AO15047 1707 aaKnown RBP10.26□□□□□ -0.77
SUMO3-202ENST00000397893 SOS2Q07890 1332 aaPredicted RBP10.26□□□□□ -0.77
SUMO3-202ENST00000397893 ADGRF5Q8IZF2 1346 aa10.26□□□□□ -0.77
SUMO3-202ENST00000397893 SHPRHQ149N8 1683 aa10.25□□□□□ -0.77
SUMO3-202ENST00000397893 NUTM2BA6NNL0 878 aaPredicted RBP10.24□□□□□ -0.77
SUMO3-202ENST00000397893 NUTM2EB1AL46 878 aaPredicted RBP10.24□□□□□ -0.77
SUMO3-202ENST00000397893 NUTM2AQ8IVF1 878 aaPredicted RBP10.24□□□□□ -0.77
SUMO3-202ENST00000397893 NHSL1Q5SYE7 1610 aa10.24□□□□□ -0.77
SUMO3-202ENST00000397893 MEX3CQ5U5Q3 659 aaKnown RBP10.23□□□□□ -0.77
SUMO3-202ENST00000397893 NALCNQ8IZF0 1738 aa10.23□□□□□ -0.77
SUMO3-202ENST00000397893 AFF2P51816 1311 aa10.23□□□□□ -0.77
SUMO3-202ENST00000397893 KIF1BO60333 1816 aa10.23□□□□□ -0.77
SUMO3-202ENST00000397893 TECPR2O15040 1411 aa10.23□□□□□ -0.77
SUMO3-202ENST00000397893 RGL3Q3MIN7 710 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms