RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 GBP2P32456 591 aaPredicted RBP9.67□□□□□ -0.86
TRPS1-203ENST00000395715 CCDC146Q8IYE0 955 aa9.67□□□□□ -0.86
TRPS1-203ENST00000395715 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
TRPS1-203ENST00000395715 CCDC175P0C221 793 aa9.67□□□□□ -0.86
TRPS1-203ENST00000395715 LMOD3Q0VAK6 560 aa9.67□□□□□ -0.86
TRPS1-203ENST00000395715 SYNE3Q6ZMZ3 975 aa9.67□□□□□ -0.86
TRPS1-203ENST00000395715 SLC26A8Q96RN1 970 aa9.66□□□□□ -0.86
TRPS1-203ENST00000395715 OLFM4Q6UX06 510 aa9.66□□□□□ -0.86
TRPS1-203ENST00000395715 RBM33Q96EV2 1170 aaKnown RBP9.66□□□□□ -0.86
TRPS1-203ENST00000395715 LRRCC1Q9C099 1032 aa9.65□□□□□ -0.86
TRPS1-203ENST00000395715 HDAC5Q9UQL6 1122 aa9.65□□□□□ -0.86
TRPS1-203ENST00000395715 SLC4A3P48751 1232 aa9.65□□□□□ -0.86
TRPS1-203ENST00000395715 PAF1Q8N7H5 531 aa9.65□□□□□ -0.86
TRPS1-203ENST00000395715 CCDC43Q96MW1 224 aaKnown RBP9.65□□□□□ -0.86
TRPS1-203ENST00000395715 ERCC6Q03468 1493 aa9.65□□□□□ -0.86
TRPS1-203ENST00000395715 SMARCE1Q969G3 411 aa9.65□□□□□ -0.87
TRPS1-203ENST00000395715 CPLX2Q6PUV4 134 aaKnown RBP9.64□□□□□ -0.87
TRPS1-203ENST00000395715 ERLIN1O75477 346 aa9.64□□□□□ -0.87
TRPS1-203ENST00000395715 DDX23Q9BUQ8 820 aaKnown RBP9.64□□□□□ -0.87
TRPS1-203ENST00000395715 FRAT2O75474 233 aaPredicted RBP9.64□□□□□ -0.87
TRPS1-203ENST00000395715 CFAP45Q9UL16 551 aa9.64□□□□□ -0.87
TRPS1-203ENST00000395715 SAFB2Q14151 953 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRPS1-203ENST00000395715 MAP2K1Q02750 393 aaPredicted RBP9.63□□□□□ -0.87
TRPS1-203ENST00000395715 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
TRPS1-203ENST00000395715 IBSPP21815 317 aaPredicted RBP9.63□□□□□ -0.87
TRPS1-203ENST00000395715 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
TRPS1-203ENST00000395715 STAMBPO95630 424 aa9.63□□□□□ -0.87
TRPS1-203ENST00000395715 MRE11P49959 708 aa9.63□□□□□ -0.87
TRPS1-203ENST00000395715 RILPL2Q969X0 211 aa9.63□□□□□ -0.87
TRPS1-203ENST00000395715 FAM193AP78312 1265 aa9.62□□□□□ -0.87
TRPS1-203ENST00000395715 CCDC180Q9P1Z9 1646 aa9.62□□□□□ -0.87
TRPS1-203ENST00000395715 HDGFP51858 240 aaKnown RBP9.62□□□□□ -0.87
TRPS1-203ENST00000395715 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
TRPS1-203ENST00000395715 SHTN1A0MZ66 631 aa9.62□□□□□ -0.87
TRPS1-203ENST00000395715 CCDC91Q7Z6B0 441 aa9.62□□□□□ -0.87
TRPS1-203ENST00000395715 SEPT6Q14141 434 aa9.62□□□□□ -0.87
TRPS1-203ENST00000395715 CCDC181Q5TID7 509 aa9.62□□□□□ -0.87
TRPS1-203ENST00000395715 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
TRPS1-203ENST00000395715 UQCRHLA0A096LP55 91 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 UQCRHP07919 91 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 SMC4Q9NTJ3 1288 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 CHMP4AQ9BY43 222 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 SYCP1Q15431 976 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 RNF20Q5VTR2 975 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 STK31Q9BXU1 1019 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 CCDC73Q6ZRK6 1079 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 DAAM2Q86T65 1068 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 CCDC102AQ96A19 550 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 CALCOCO1Q9P1Z2 691 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
TRPS1-203ENST00000395715 TRIM5Q9C035 493 aa9.61□□□□□ -0.87
TRPS1-203ENST00000395715 IRX3P78415 501 aaPredicted RBP9.6□□□□□ -0.87
TRPS1-203ENST00000395715 CCDC112Q8NEF3 446 aa9.6□□□□□ -0.87
TRPS1-203ENST00000395715 TRIM34Q9BYJ4 488 aa9.6□□□□□ -0.87
TRPS1-203ENST00000395715 E9PSI1 815 aa9.6□□□□□ -0.87
TRPS1-203ENST00000395715 CCER2I3L3R5 266 aa9.6□□□□□ -0.87
TRPS1-203ENST00000395715 CTDP1Q9Y5B0 961 aaPredicted RBP9.6□□□□□ -0.87
TRPS1-203ENST00000395715 CPLX1O14810 134 aa9.6□□□□□ -0.87
TRPS1-203ENST00000395715 MSH5O43196 834 aa9.6□□□□□ -0.87
TRPS1-203ENST00000395715 IQCEQ6IPM2 695 aa9.6□□□□□ -0.87
TRPS1-203ENST00000395715 TMCO3Q6UWJ1 677 aa9.6□□□□□ -0.87
TRPS1-203ENST00000395715 STK26Q9P289 416 aa9.6□□□□□ -0.87
TRPS1-203ENST00000395715 RAD21O60216 631 aa9.59□□□□□ -0.87
TRPS1-203ENST00000395715 TMF1P82094 1093 aa9.59□□□□□ -0.87
TRPS1-203ENST00000395715 MORC1Q86VD1 984 aa9.59□□□□□ -0.87
TRPS1-203ENST00000395715 CHMP5Q9NZZ3 219 aa9.59□□□□□ -0.87
TRPS1-203ENST00000395715 LETM1O95202 739 aaPredicted RBP9.59□□□□□ -0.87
TRPS1-203ENST00000395715 SMC2O95347 1197 aa9.59□□□□□ -0.87
TRPS1-203ENST00000395715 SPAG9O60271 1321 aaKnown RBP9.59□□□□□ -0.87
TRPS1-203ENST00000395715 GTF2A1P52655 376 aaPredicted RBP9.59□□□□□ -0.87
TRPS1-203ENST00000395715 SLC4A10Q6U841 1118 aa9.59□□□□□ -0.87
TRPS1-203ENST00000395715 AMOTL1Q8IY63 956 aa9.59□□□□□ -0.87
TRPS1-203ENST00000395715 SSR1P43307 286 aaKnown RBP9.59□□□□□ -0.87
TRPS1-203ENST00000395715 FAM107BQ9H098 131 aa9.59□□□□□ -0.88
TRPS1-203ENST00000395715 NUCB2P80303 420 aa9.58□□□□□ -0.88
TRPS1-203ENST00000395715 CAVIN1Q6NZI2 390 aaKnown RBP9.58□□□□□ -0.88
TRPS1-203ENST00000395715 CGNQ9P2M7 1197 aaKnown RBP9.58□□□□□ -0.88
TRPS1-203ENST00000395715 CFDP1Q9UEE9 299 aaPredicted RBP9.58□□□□□ -0.88
TRPS1-203ENST00000395715 FILIP1LQ4L180 1135 aa9.58□□□□□ -0.88
TRPS1-203ENST00000395715 KIF3BO15066 747 aa9.58□□□□□ -0.88
TRPS1-203ENST00000395715 BMS1Q14692 1282 aaKnown RBP9.58□□□□□ -0.88
TRPS1-203ENST00000395715 FANCIQ9NVI1 1328 aa9.58□□□□□ -0.88
TRPS1-203ENST00000395715 LRRFIP1Q32MZ4 808 aaKnown RBP9.58□□□□□ -0.88
TRPS1-203ENST00000395715 PHF23Q9BUL5 403 aaPredicted RBP9.58□□□□□ -0.88
TRPS1-203ENST00000395715 PDE4AP27815 886 aa9.57□□□□□ -0.88
TRPS1-203ENST00000395715 FEZ1Q99689 392 aa9.57□□□□□ -0.88
TRPS1-203ENST00000395715 ZWINTO95229 277 aa9.57□□□□□ -0.88
TRPS1-203ENST00000395715 ZKSCAN1P17029 563 aaPredicted RBP9.57□□□□□ -0.88
TRPS1-203ENST00000395715 LUC7LQ9NQ29 371 aaKnown RBP9.57□□□□□ -0.88
TRPS1-203ENST00000395715 VPS37CA5D8V6 355 aaPredicted RBP9.57□□□□□ -0.88
TRPS1-203ENST00000395715 TMCO5BA8MYB1 307 aa9.57□□□□□ -0.88
TRPS1-203ENST00000395715 WDR66Q8TBY9 1149 aa9.57□□□□□ -0.88
TRPS1-203ENST00000395715 KANK1Q14678 1352 aa9.57□□□□□ -0.88
TRPS1-203ENST00000395715 KTN1Q86UP2 1357 aaKnown RBP9.57□□□□□ -0.88
TRPS1-203ENST00000395715 MICALCLQ6ZW33 695 aa9.57□□□□□ -0.88
TRPS1-203ENST00000395715 CENPQQ7L2Z9 268 aaPredicted RBP9.56□□□□□ -0.88
TRPS1-203ENST00000395715 FAM114A1Q8IWE2 563 aa9.56□□□□□ -0.88
TRPS1-203ENST00000395715 MAGEC2Q9UBF1 373 aaPredicted RBP9.56□□□□□ -0.88
TRPS1-203ENST00000395715 REC8O95072 547 aa9.56□□□□□ -0.88
TRPS1-203ENST00000395715 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms