RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 KIAA0754O94854 1291 aa18.38■□□□□ 0.53
APAF1-203ENST00000359972 TSPY26PQ9H489 355 aa18.38■□□□□ 0.53
APAF1-203ENST00000359972 C22orf23Q9BZE7 217 aa18.38■□□□□ 0.53
APAF1-203ENST00000359972 TRIM5Q9C035 493 aa18.38■□□□□ 0.53
APAF1-203ENST00000359972 CENPHQ9H3R5 247 aa18.38■□□□□ 0.53
APAF1-203ENST00000359972 IBSPP21815 317 aaPredicted RBP18.37■□□□□ 0.53
APAF1-203ENST00000359972 STK26Q9P289 416 aa18.37■□□□□ 0.53
APAF1-203ENST00000359972 TAF3Q5VWG9 929 aa18.36■□□□□ 0.53
APAF1-203ENST00000359972 ZHX1Q9UKY1 873 aaPredicted RBP18.36■□□□□ 0.53
APAF1-203ENST00000359972 TRERF1Q96PN7 1200 aa18.36■□□□□ 0.53
APAF1-203ENST00000359972 MEX3CQ5U5Q3 659 aaKnown RBP18.36■□□□□ 0.53
APAF1-203ENST00000359972 SMC3Q9UQE7 1217 aa18.36■□□□□ 0.53
APAF1-203ENST00000359972 ZMYND15Q9H091 742 aa18.35■□□□□ 0.53
APAF1-203ENST00000359972 CT47B1P0C2W7 299 aaPredicted RBP18.35■□□□□ 0.53
APAF1-203ENST00000359972 ZBED9Q6R2W3 1325 aa18.35■□□□□ 0.53
APAF1-203ENST00000359972 AKAP17AQ02040 695 aaKnown RBP18.35■□□□□ 0.53
APAF1-203ENST00000359972 GIMAP7Q8NHV1 300 aa18.34■□□□□ 0.53
APAF1-203ENST00000359972 SMC2O95347 1197 aa18.34■□□□□ 0.53
APAF1-203ENST00000359972 HDGFL2Q7Z4V5 671 aaPredicted RBP18.34■□□□□ 0.53
APAF1-203ENST00000359972 NLRP13Q86W25 1043 aa18.33■□□□□ 0.53
APAF1-203ENST00000359972 HOOK1Q9UJC3 728 aaKnown RBP18.33■□□□□ 0.53
APAF1-203ENST00000359972 SPAG9O60271 1321 aaKnown RBP18.33■□□□□ 0.53
APAF1-203ENST00000359972 ELL2O00472 640 aaPredicted RBP18.33■□□□□ 0.52
APAF1-203ENST00000359972 REC8O95072 547 aa18.33■□□□□ 0.52
APAF1-203ENST00000359972 TRIM29Q14134 588 aa18.33■□□□□ 0.52
APAF1-203ENST00000359972 CCDC27Q2M243 656 aa18.33■□□□□ 0.52
APAF1-203ENST00000359972 CGNL1Q0VF96 1302 aa18.33■□□□□ 0.52
APAF1-203ENST00000359972 DYDC1Q8WWB3 177 aa18.33■□□□□ 0.52
APAF1-203ENST00000359972 PRPF40AO75400 957 aaKnown RBP18.33■□□□□ 0.52
APAF1-203ENST00000359972 GRPEL1Q9HAV7 217 aa18.33■□□□□ 0.52
APAF1-203ENST00000359972 CGNQ9P2M7 1197 aaKnown RBP18.32■□□□□ 0.52
APAF1-203ENST00000359972 STK11IPQ8N1F8 1099 aa18.31■□□□□ 0.52
APAF1-203ENST00000359972 CCDC73Q6ZRK6 1079 aa18.31■□□□□ 0.52
APAF1-203ENST00000359972 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
APAF1-203ENST00000359972 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
APAF1-203ENST00000359972 FAM193AP78312 1265 aa18.31■□□□□ 0.52
APAF1-203ENST00000359972 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
APAF1-203ENST00000359972 E9PSI1 815 aa18.3■□□□□ 0.52
APAF1-203ENST00000359972 CHMP4AQ9BY43 222 aa18.3■□□□□ 0.52
APAF1-203ENST00000359972 HSP90AB2PQ58FF8 381 aa18.3■□□□□ 0.52
APAF1-203ENST00000359972 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
APAF1-203ENST00000359972 TNNT1P13805 278 aa18.29■□□□□ 0.52
APAF1-203ENST00000359972 NAT10Q9H0A0 1025 aaKnown RBP18.29■□□□□ 0.52
APAF1-203ENST00000359972 MYBBP1AQ9BQG0 1328 aaKnown RBP18.29■□□□□ 0.52
APAF1-203ENST00000359972 PDCL2Q8N4E4 241 aa18.28■□□□□ 0.52
APAF1-203ENST00000359972 USP8P40818 1118 aa18.28■□□□□ 0.52
APAF1-203ENST00000359972 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
APAF1-203ENST00000359972 PKD2Q13563 968 aa18.28■□□□□ 0.52
APAF1-203ENST00000359972 TICAM2Q86XR7 235 aa18.28■□□□□ 0.52
APAF1-203ENST00000359972 CCDC47Q96A33 483 aaKnown RBP18.27■□□□□ 0.52
APAF1-203ENST00000359972 SYNE3Q6ZMZ3 975 aa18.27■□□□□ 0.52
APAF1-203ENST00000359972 IPO4Q8TEX9 1081 aaKnown RBP18.27■□□□□ 0.51
APAF1-203ENST00000359972 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
APAF1-203ENST00000359972 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
APAF1-203ENST00000359972 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
APAF1-203ENST00000359972 ESPNB1AK53 854 aa18.26■□□□□ 0.51
APAF1-203ENST00000359972 FAM177A1Q8N128 213 aaPredicted RBP18.26■□□□□ 0.51
APAF1-203ENST00000359972 LETM1O95202 739 aaPredicted RBP18.25■□□□□ 0.51
APAF1-203ENST00000359972 CPLX1O14810 134 aa18.25■□□□□ 0.51
APAF1-203ENST00000359972 FMNL2Q96PY5 1086 aa18.25■□□□□ 0.51
APAF1-203ENST00000359972 PHLDB1Q86UU1 1377 aa18.25■□□□□ 0.51
APAF1-203ENST00000359972 CT47A1Q5JQC4 288 aaPredicted RBP18.24■□□□□ 0.51
APAF1-203ENST00000359972 INTS3Q68E01 1043 aaKnown RBP18.24■□□□□ 0.51
APAF1-203ENST00000359972 ZNF526Q8TF50 670 aaPredicted RBP18.24■□□□□ 0.51
APAF1-203ENST00000359972 KDM4AO75164 1064 aa18.24■□□□□ 0.51
APAF1-203ENST00000359972 ZRSR2Q15696 482 aaKnown RBP18.24■□□□□ 0.51
APAF1-203ENST00000359972 CHMP4CQ96CF2 233 aa18.24■□□□□ 0.51
APAF1-203ENST00000359972 LNPKQ9C0E8 428 aa18.23■□□□□ 0.51
APAF1-203ENST00000359972 CCP110O43303 1012 aa18.23■□□□□ 0.51
APAF1-203ENST00000359972 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
APAF1-203ENST00000359972 BRPF1P55201 1214 aaPredicted RBP18.22■□□□□ 0.51
APAF1-203ENST00000359972 GOLGA6L7A0A1B0GV03 622 aa18.22■□□□□ 0.51
APAF1-203ENST00000359972 CCDC102AQ96A19 550 aa18.22■□□□□ 0.51
APAF1-203ENST00000359972 SDF4Q9BRK5 362 aa18.21■□□□□ 0.51
APAF1-203ENST00000359972 RSPH4AQ5TD94 716 aa18.21■□□□□ 0.51
APAF1-203ENST00000359972 BBXQ8WY36 941 aaPredicted RBP18.21■□□□□ 0.51
APAF1-203ENST00000359972 GOLGA6L10A6NI86 522 aa18.21■□□□□ 0.51
APAF1-203ENST00000359972 HDAC5Q9UQL6 1122 aa18.21■□□□□ 0.51
APAF1-203ENST00000359972 MPHOSPH9Q99550 1183 aa18.21■□□□□ 0.5
APAF1-203ENST00000359972 EIF3JO75822 258 aaKnown RBP18.2■□□□□ 0.5
APAF1-203ENST00000359972 ENOX2Q16206 610 aaKnown RBP18.2■□□□□ 0.5
APAF1-203ENST00000359972 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.2■□□□□ 0.55e-9■■■■■ 167.7
APAF1-203ENST00000359972 ZFYVE27Q5T4F4 411 aa18.2■□□□□ 0.5
APAF1-203ENST00000359972 MYO6Q9UM54 1294 aa18.2■□□□□ 0.5
APAF1-203ENST00000359972 ODF2Q5BJF6 829 aa18.19■□□□□ 0.5
APAF1-203ENST00000359972 CPLX2Q6PUV4 134 aaKnown RBP18.19■□□□□ 0.5
APAF1-203ENST00000359972 TRIM34Q9BYJ4 488 aa18.19■□□□□ 0.5
APAF1-203ENST00000359972 INCENPQ9NQS7 918 aa18.19■□□□□ 0.5
APAF1-203ENST00000359972 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
APAF1-203ENST00000359972 DDX19BQ9UMR2 479 aa18.19■□□□□ 0.5
APAF1-203ENST00000359972 NEFHP12036 1026 aa18.18■□□□□ 0.5
APAF1-203ENST00000359972 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
APAF1-203ENST00000359972 ANKRD62A6NC57 917 aa18.17■□□□□ 0.5
APAF1-203ENST00000359972 MBD3O95983 291 aa18.17■□□□□ 0.5
APAF1-203ENST00000359972 RAD21O60216 631 aa18.17■□□□□ 0.5
APAF1-203ENST00000359972 TAX1BP1Q86VP1 789 aa18.17■□□□□ 0.5
APAF1-203ENST00000359972 EPS15P42566 896 aa18.17■□□□□ 0.5
APAF1-203ENST00000359972 OFD1O75665 1012 aa18.17■□□□□ 0.5
APAF1-203ENST00000359972 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
APAF1-203ENST00000359972 L3MBTL2Q969R5 705 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms