RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 IFFO2Q5TF58 517 aa16.51■□□□□ 0.23
TRIO-202ENST00000344204 FOXD1Q16676 465 aa16.51■□□□□ 0.23
TRIO-202ENST00000344204 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
TRIO-202ENST00000344204 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
TRIO-202ENST00000344204 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
TRIO-202ENST00000344204 SMAP1Q8IYB5 467 aaPredicted RBP16.5■□□□□ 0.23
TRIO-202ENST00000344204 COG6Q9Y2V7 657 aa16.5■□□□□ 0.23
TRIO-202ENST00000344204 CCDC7Q96M83 1385 aa16.49■□□□□ 0.23
TRIO-202ENST00000344204 MCM5P33992 734 aa16.49■□□□□ 0.23
TRIO-202ENST00000344204 ANKRD45Q5TZF3 282 aa16.49■□□□□ 0.23
TRIO-202ENST00000344204 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
TRIO-202ENST00000344204 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
TRIO-202ENST00000344204 GIMAP7Q8NHV1 300 aa16.49■□□□□ 0.23
TRIO-202ENST00000344204 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
TRIO-202ENST00000344204 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
TRIO-202ENST00000344204 CDR1P51861 262 aa16.48■□□□□ 0.23
TRIO-202ENST00000344204 NBPF1Q3BBV0 1214 aa16.48■□□□□ 0.23
TRIO-202ENST00000344204 NAT10Q9H0A0 1025 aaKnown RBP16.48■□□□□ 0.23
TRIO-202ENST00000344204 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
TRIO-202ENST00000344204 PAXIP1Q6ZW49 1069 aaPredicted RBP16.47■□□□□ 0.23
TRIO-202ENST00000344204 TULP1O00294 542 aaPredicted RBP16.47■□□□□ 0.23
TRIO-202ENST00000344204 L3MBTL2Q969R5 705 aa16.47■□□□□ 0.23
TRIO-202ENST00000344204 MPHOSPH9Q99550 1183 aa16.47■□□□□ 0.23
TRIO-202ENST00000344204 GPATCH11Q8N954 259 aa16.47■□□□□ 0.23
TRIO-202ENST00000344204 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.23
TRIO-202ENST00000344204 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRIO-202ENST00000344204 GTF2A1P52655 376 aaPredicted RBP16.46■□□□□ 0.23
TRIO-202ENST00000344204 CCDC94Q9BW85 323 aaPredicted RBP16.46■□□□□ 0.23
TRIO-202ENST00000344204 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.22
TRIO-202ENST00000344204 EIF3JO75822 258 aaKnown RBP16.45■□□□□ 0.22
TRIO-202ENST00000344204 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
TRIO-202ENST00000344204 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
TRIO-202ENST00000344204 SPC24Q8NBT2 197 aa16.44■□□□□ 0.22
TRIO-202ENST00000344204 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
TRIO-202ENST00000344204 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
TRIO-202ENST00000344204 BICD2Q8TD16 824 aa16.43■□□□□ 0.22
TRIO-202ENST00000344204 DDX19BQ9UMR2 479 aa16.43■□□□□ 0.22
TRIO-202ENST00000344204 KIF21BO75037 1637 aa16.43■□□□□ 0.22
TRIO-202ENST00000344204 PLCD3Q8N3E9 789 aa16.43■□□□□ 0.22
TRIO-202ENST00000344204 RABEP1Q15276 862 aa16.42■□□□□ 0.22
TRIO-202ENST00000344204 ANKRD30AQ9BXX3 1397 aa16.42■□□□□ 0.22
TRIO-202ENST00000344204 IPO7O95373 1038 aaKnown RBP16.42■□□□□ 0.22
TRIO-202ENST00000344204 PRPF40AO75400 957 aaKnown RBP16.42■□□□□ 0.22
TRIO-202ENST00000344204 CREBRFQ8IUR6 639 aa16.42■□□□□ 0.22
TRIO-202ENST00000344204 DHX8Q14562 1220 aaKnown RBP16.42■□□□□ 0.22
TRIO-202ENST00000344204 NPHP1O15259 732 aa16.41■□□□□ 0.22
TRIO-202ENST00000344204 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
TRIO-202ENST00000344204 AXDND1Q5T1B0 1012 aaPredicted RBP16.41■□□□□ 0.22
TRIO-202ENST00000344204 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
TRIO-202ENST00000344204 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
TRIO-202ENST00000344204 INTS3Q68E01 1043 aaKnown RBP16.4■□□□□ 0.22
TRIO-202ENST00000344204 FAM107BQ9H098 131 aa16.4■□□□□ 0.22
TRIO-202ENST00000344204 PRIMPOLQ96LW4 560 aa16.4■□□□□ 0.22
TRIO-202ENST00000344204 PKD2Q13563 968 aa16.39■□□□□ 0.21
TRIO-202ENST00000344204 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.21
TRIO-202ENST00000344204 KIF2AO00139 706 aaPredicted RBP16.38■□□□□ 0.21
TRIO-202ENST00000344204 CCDC192P0DO97 292 aa16.38■□□□□ 0.21
TRIO-202ENST00000344204 CDC45O75419 566 aa16.38■□□□□ 0.21
TRIO-202ENST00000344204 CHMP4CQ96CF2 233 aa16.38■□□□□ 0.21
TRIO-202ENST00000344204 CTR9Q6PD62 1173 aa16.38■□□□□ 0.21
TRIO-202ENST00000344204 CWC22Q9HCG8 908 aaKnown RBP16.38■□□□□ 0.21
TRIO-202ENST00000344204 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
TRIO-202ENST00000344204 HOOK1Q9UJC3 728 aaKnown RBP16.38■□□□□ 0.21
TRIO-202ENST00000344204 NACADO15069 1562 aa16.38■□□□□ 0.21
TRIO-202ENST00000344204 ERLIN1O75477 346 aa16.37■□□□□ 0.21
TRIO-202ENST00000344204 KIF20AO95235 890 aa16.37■□□□□ 0.21
TRIO-202ENST00000344204 KIF7Q2M1P5 1343 aa16.37■□□□□ 0.21
TRIO-202ENST00000344204 INCENPQ9NQS7 918 aa16.37■□□□□ 0.21
TRIO-202ENST00000344204 SMC3Q9UQE7 1217 aa16.37■□□□□ 0.21
TRIO-202ENST00000344204 CAGE1Q8TC20 777 aa16.37■□□□□ 0.21
TRIO-202ENST00000344204 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
TRIO-202ENST00000344204 MPNDQ8N594 471 aa16.36■□□□□ 0.21
TRIO-202ENST00000344204 ANKRD20A12PQ8NF67 263 aa16.36■□□□□ 0.21
TRIO-202ENST00000344204 DZIP1LQ8IYY4 767 aaKnown RBP16.36■□□□□ 0.21
TRIO-202ENST00000344204 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
TRIO-202ENST00000344204 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
TRIO-202ENST00000344204 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
TRIO-202ENST00000344204 PES1O00541 588 aaKnown RBP16.36■□□□□ 0.21
TRIO-202ENST00000344204 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
TRIO-202ENST00000344204 BCL2L13Q9BXK5 485 aa16.36■□□□□ 0.21
TRIO-202ENST00000344204 KRT222Q8N1A0 295 aa16.35■□□□□ 0.21
TRIO-202ENST00000344204 PANK1Q8TE04 598 aa16.35■□□□□ 0.21
TRIO-202ENST00000344204 DYDC1Q8WWB3 177 aa16.35■□□□□ 0.21
TRIO-202ENST00000344204 FBXW7Q969H0 707 aa16.35■□□□□ 0.21
TRIO-202ENST00000344204 PLCD4Q9BRC7 762 aa16.35■□□□□ 0.21
TRIO-202ENST00000344204 TXLNBQ8N3L3 684 aa16.35■□□□□ 0.21
TRIO-202ENST00000344204 TOP2AP11388 1531 aaKnown RBP16.34■□□□□ 0.21
TRIO-202ENST00000344204 NOL10Q9BSC4 688 aaKnown RBP16.34■□□□□ 0.21
TRIO-202ENST00000344204 K7ELQ4 463 aaPredicted RBP16.34■□□□□ 0.21
TRIO-202ENST00000344204 RILPL2Q969X0 211 aa16.34■□□□□ 0.21
TRIO-202ENST00000344204 SMC2O95347 1197 aa16.34■□□□□ 0.21
TRIO-202ENST00000344204 ROCK1Q13464 1354 aa16.34■□□□□ 0.21
TRIO-202ENST00000344204 CUX1P39880 1505 aa16.34■□□□□ 0.21
TRIO-202ENST00000344204 IPO4Q8TEX9 1081 aaKnown RBP16.33■□□□□ 0.21
TRIO-202ENST00000344204 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.21
TRIO-202ENST00000344204 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.33■□□□□ 0.21
TRIO-202ENST00000344204 GTF2F1P35269 517 aaKnown RBP eCLIP16.33■□□□□ 0.21e-6■■■■■ 29.8
TRIO-202ENST00000344204 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
TRIO-202ENST00000344204 SYCE3A1L190 88 aa16.33■□□□□ 0.2
TRIO-202ENST00000344204 MCM2P49736 904 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms