RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 AKAP17AQ02040 695 aaKnown RBP20.01■□□□□ 0.79
SMAD3-201ENST00000327367 ZKSCAN2Q63HK3 967 aa20.01■□□□□ 0.79
SMAD3-201ENST00000327367 LEKR1Q6ZMV7 388 aa20.01■□□□□ 0.79
SMAD3-201ENST00000327367 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
SMAD3-201ENST00000327367 AEBP1Q8IUX7 1158 aa20■□□□□ 0.79
SMAD3-201ENST00000327367 ZBED9Q6R2W3 1325 aa20■□□□□ 0.79
SMAD3-201ENST00000327367 NUTM2DQ5VT03 806 aaPredicted RBP20■□□□□ 0.79
SMAD3-201ENST00000327367 MYBBP1AQ9BQG0 1328 aaKnown RBP20■□□□□ 0.79
SMAD3-201ENST00000327367 SMC3Q9UQE7 1217 aa20■□□□□ 0.79
SMAD3-201ENST00000327367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.99■□□□□ 0.794e-6■■□□□ 13.1
SMAD3-201ENST00000327367 LTV1Q96GA3 475 aaPredicted RBP19.99■□□□□ 0.79
SMAD3-201ENST00000327367 ANKRD20A12PQ8NF67 263 aa19.97■□□□□ 0.79
SMAD3-201ENST00000327367 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
SMAD3-201ENST00000327367 AXDND1Q5T1B0 1012 aaPredicted RBP19.97■□□□□ 0.79
SMAD3-201ENST00000327367 TRIM5Q9C035 493 aa19.97■□□□□ 0.79
SMAD3-201ENST00000327367 NUCB2P80303 420 aa19.97■□□□□ 0.79
SMAD3-201ENST00000327367 TRIM29Q14134 588 aa19.97■□□□□ 0.79
SMAD3-201ENST00000327367 NECTIN2Q92692 538 aa19.96■□□□□ 0.79
SMAD3-201ENST00000327367 CDR1P51861 262 aa19.96■□□□□ 0.79
SMAD3-201ENST00000327367 REC8O95072 547 aa19.96■□□□□ 0.79
SMAD3-201ENST00000327367 LNPKQ9C0E8 428 aa19.96■□□□□ 0.79
SMAD3-201ENST00000327367 KIF15Q9NS87 1388 aa19.96■□□□□ 0.79
SMAD3-201ENST00000327367 KANK1Q14678 1352 aa19.96■□□□□ 0.79
SMAD3-201ENST00000327367 RAD21O60216 631 aa19.95■□□□□ 0.78
SMAD3-201ENST00000327367 PRPF40AO75400 957 aaKnown RBP19.95■□□□□ 0.78
SMAD3-201ENST00000327367 PANK3Q9H999 370 aa19.95■□□□□ 0.78
SMAD3-201ENST00000327367 SMC2O95347 1197 aa19.94■□□□□ 0.78
SMAD3-201ENST00000327367 TSPY26PQ9H489 355 aa19.94■□□□□ 0.78
SMAD3-201ENST00000327367 ARHGAP35Q9NRY4 1499 aa19.94■□□□□ 0.78
SMAD3-201ENST00000327367 CCDC173Q0VFZ6 552 aa19.94■□□□□ 0.78
SMAD3-201ENST00000327367 CGNL1Q0VF96 1302 aa19.94■□□□□ 0.78
SMAD3-201ENST00000327367 IBSPP21815 317 aaPredicted RBP19.93■□□□□ 0.78
SMAD3-201ENST00000327367 SYNE3Q6ZMZ3 975 aa19.92■□□□□ 0.78
SMAD3-201ENST00000327367 PRKRIP1Q9H875 184 aaPredicted RBP19.92■□□□□ 0.78
SMAD3-201ENST00000327367 CPLX1O14810 134 aa19.92■□□□□ 0.78
SMAD3-201ENST00000327367 E9PSI1 815 aa19.92■□□□□ 0.78
SMAD3-201ENST00000327367 CCDC73Q6ZRK6 1079 aa19.92■□□□□ 0.78
SMAD3-201ENST00000327367 ZKSCAN1P17029 563 aaPredicted RBP19.92■□□□□ 0.78
SMAD3-201ENST00000327367 APAF1O14727 1248 aa19.91■□□□□ 0.78
SMAD3-201ENST00000327367 FMNL2Q96PY5 1086 aa19.91■□□□□ 0.78
SMAD3-201ENST00000327367 GGT6Q6P531 493 aa19.91■□□□□ 0.78
SMAD3-201ENST00000327367 DCTN1Q14203 1278 aa19.91■□□□□ 0.78
SMAD3-201ENST00000327367 NGEFQ8N5V2 710 aa19.91■□□□□ 0.78
SMAD3-201ENST00000327367 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
SMAD3-201ENST00000327367 RRP9O43818 475 aaKnown RBP19.89■□□□□ 0.77
SMAD3-201ENST00000327367 CBX1P83916 185 aa19.89■□□□□ 0.77
SMAD3-201ENST00000327367 PANK1Q8TE04 598 aa19.89■□□□□ 0.77
SMAD3-201ENST00000327367 TRERF1Q96PN7 1200 aa19.89■□□□□ 0.77
SMAD3-201ENST00000327367 HOOK1Q9UJC3 728 aaKnown RBP19.89■□□□□ 0.77
SMAD3-201ENST00000327367 NUTM2FA1L443 756 aa19.88■□□□□ 0.77
SMAD3-201ENST00000327367 EIF4G1Q04637 1599 aaKnown RBP19.88■□□□□ 0.77
SMAD3-201ENST00000327367 RBM25P49756 843 aaKnown RBP19.88■□□□□ 0.77
SMAD3-201ENST00000327367 FAM177A1Q8N128 213 aaPredicted RBP19.88■□□□□ 0.77
SMAD3-201ENST00000327367 ERCC4Q92889 916 aaPredicted RBP19.88■□□□□ 0.77
SMAD3-201ENST00000327367 SOGA1O94964 1423 aa19.87■□□□□ 0.77
SMAD3-201ENST00000327367 FAM193AP78312 1265 aa19.87■□□□□ 0.77
SMAD3-201ENST00000327367 INTS3Q68E01 1043 aaKnown RBP19.87■□□□□ 0.77
SMAD3-201ENST00000327367 HSP90AB2PQ58FF8 381 aa19.87■□□□□ 0.77
SMAD3-201ENST00000327367 NFXL1Q6ZNB6 911 aa19.87■□□□□ 0.77
SMAD3-201ENST00000327367 CENPHQ9H3R5 247 aa19.87■□□□□ 0.77
SMAD3-201ENST00000327367 G3V3G9 751 aa19.87■□□□□ 0.77
SMAD3-201ENST00000327367 DCAF8Q5TAQ9 597 aa19.87■□□□□ 0.77
SMAD3-201ENST00000327367 BRPF1P55201 1214 aaPredicted RBP19.87■□□□□ 0.77
SMAD3-201ENST00000327367 NUP155O75694 1391 aa19.86■□□□□ 0.77
SMAD3-201ENST00000327367 RUFY2Q8WXA3 655 aa19.86■□□□□ 0.77
SMAD3-201ENST00000327367 GRPEL1Q9HAV7 217 aa19.86■□□□□ 0.77
SMAD3-201ENST00000327367 ST20-MTHFSA0A0A6YYL1 179 aa19.86■□□□□ 0.77
SMAD3-201ENST00000327367 CT47B1P0C2W7 299 aaPredicted RBP19.86■□□□□ 0.77
SMAD3-201ENST00000327367 OLFM4Q6UX06 510 aa19.86■□□□□ 0.77
SMAD3-201ENST00000327367 DZIP1LQ8IYY4 767 aaKnown RBP19.86■□□□□ 0.77
SMAD3-201ENST00000327367 PHLDB1Q86UU1 1377 aa19.86■□□□□ 0.77
SMAD3-201ENST00000327367 CCDC47Q96A33 483 aaKnown RBP19.86■□□□□ 0.77
SMAD3-201ENST00000327367 HDAC5Q9UQL6 1122 aa19.85■□□□□ 0.77
SMAD3-201ENST00000327367 LMOD3Q0VAK6 560 aa19.85■□□□□ 0.77
SMAD3-201ENST00000327367 DDX19BQ9UMR2 479 aa19.85■□□□□ 0.77
SMAD3-201ENST00000327367 EIF2S2P20042 333 aaKnown RBP19.85■□□□□ 0.77
SMAD3-201ENST00000327367 CT47A1Q5JQC4 288 aaPredicted RBP19.84■□□□□ 0.77
SMAD3-201ENST00000327367 CEBPZQ03701 1054 aaKnown RBP19.84■□□□□ 0.77
SMAD3-201ENST00000327367 SDF4Q9BRK5 362 aa19.84■□□□□ 0.77
SMAD3-201ENST00000327367 IFIT2P09913 472 aaKnown RBP19.84■□□□□ 0.77
SMAD3-201ENST00000327367 HMGN5P82970 282 aaKnown RBP19.83■□□□□ 0.77
SMAD3-201ENST00000327367 NAT10Q9H0A0 1025 aaKnown RBP19.83■□□□□ 0.77
SMAD3-201ENST00000327367 KIAA0754O94854 1291 aa19.83■□□□□ 0.76
SMAD3-201ENST00000327367 CPLX2Q6PUV4 134 aaKnown RBP19.83■□□□□ 0.76
SMAD3-201ENST00000327367 ZHX1Q9UKY1 873 aaPredicted RBP19.83■□□□□ 0.76
SMAD3-201ENST00000327367 AMPHP49418 695 aa19.82■□□□□ 0.76
SMAD3-201ENST00000327367 ZFYVE27Q5T4F4 411 aa19.82■□□□□ 0.76
SMAD3-201ENST00000327367 EIF3AQ14152 1382 aaKnown RBP19.82■□□□□ 0.76
SMAD3-201ENST00000327367 DHX16O60231 1041 aaKnown RBP19.82■□□□□ 0.76
SMAD3-201ENST00000327367 MEX3CQ5U5Q3 659 aaKnown RBP19.81■□□□□ 0.76
SMAD3-201ENST00000327367 FIBPO43427 364 aa19.81■□□□□ 0.76
SMAD3-201ENST00000327367 CCDC112Q8NEF3 446 aa19.81■□□□□ 0.76
SMAD3-201ENST00000327367 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
SMAD3-201ENST00000327367 TERF2IPQ9NYB0 399 aa19.8■□□□□ 0.76
SMAD3-201ENST00000327367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.8■□□□□ 0.761e-6■■■■■ 305.8
SMAD3-201ENST00000327367 TMX4Q9H1E5 349 aaPredicted RBP19.79■□□□□ 0.76
SMAD3-201ENST00000327367 TRAK1Q9UPV9 953 aa19.79■□□□□ 0.76
SMAD3-201ENST00000327367 GPATCH11Q8N954 259 aa19.79■□□□□ 0.76
SMAD3-201ENST00000327367 TCEAL9Q9UHQ7 104 aa19.78■□□□□ 0.76
SMAD3-201ENST00000327367 CHMP4CQ96CF2 233 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms