RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 MYO5BQ9ULV0 1848 aa30.09■■■□□ 2.41
CXCL3-201ENST00000296026 E9PCH4 1651 aa30.07■■■□□ 2.41
CXCL3-201ENST00000296026 TMEM94Q12767 1356 aa30.07■■■□□ 2.4
CXCL3-201ENST00000296026 TMEM131LA2VDJ0 1609 aa30.07■■■□□ 2.4
CXCL3-201ENST00000296026 ZFYVE9O95405 1425 aa30.06■■■□□ 2.4
CXCL3-201ENST00000296026 IQGAP3Q86VI3 1631 aa30.06■■■□□ 2.4
CXCL3-201ENST00000296026 PROSER2Q86WR7 435 aaPredicted RBP30.05■■■□□ 2.4
CXCL3-201ENST00000296026 RIMS2Q9UQ26 1411 aa30.05■■■□□ 2.4
CXCL3-201ENST00000296026 HDGFP51858 240 aaKnown RBP30.03■■■□□ 2.4
CXCL3-201ENST00000296026 PPP1R15AO75807 674 aaPredicted RBP30.02■■■□□ 2.4
CXCL3-201ENST00000296026 CHGAP10645 457 aaKnown RBP30.02■■■□□ 2.4
CXCL3-201ENST00000296026 NWD1Q149M9 1564 aa30.02■■■□□ 2.4
CXCL3-201ENST00000296026 PLEKHG1Q9ULL1 1385 aa30.02■■■□□ 2.4
CXCL3-201ENST00000296026 RBM33Q96EV2 1170 aaKnown RBP30.01■■■□□ 2.39
CXCL3-201ENST00000296026 NUP155O75694 1391 aa30.01■■■□□ 2.39
CXCL3-201ENST00000296026 NKTRP30414 1462 aaKnown RBP30■■■□□ 2.39
CXCL3-201ENST00000296026 FAM135BQ49AJ0 1406 aa29.96■■■□□ 2.39
CXCL3-201ENST00000296026 PHF23Q9BUL5 403 aaPredicted RBP29.96■■■□□ 2.39
CXCL3-201ENST00000296026 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.95■■■□□ 2.39
CXCL3-201ENST00000296026 CHD2O14647 1828 aaKnown RBP29.93■■■□□ 2.38
CXCL3-201ENST00000296026 NUTM2DQ5VT03 806 aaPredicted RBP29.92■■■□□ 2.38
CXCL3-201ENST00000296026 TBX22Q9Y458 520 aa29.91■■■□□ 2.38
CXCL3-201ENST00000296026 MSH6P52701 1360 aa29.9■■■□□ 2.38
CXCL3-201ENST00000296026 ROBO1Q9Y6N7 1651 aa29.89■■■□□ 2.38
CXCL3-201ENST00000296026 ADAMTS13Q76LX8 1427 aa29.87■■■□□ 2.37
CXCL3-201ENST00000296026 RRBP1Q9P2E9 1410 aaKnown RBP29.84■■■□□ 2.37
CXCL3-201ENST00000296026 DIP2AQ14689 1571 aa29.83■■■□□ 2.37
CXCL3-201ENST00000296026 SPHKAPQ2M3C7 1700 aa29.82■■■□□ 2.36
CXCL3-201ENST00000296026 SLAIN2Q9P270 581 aa29.81■■■□□ 2.36
CXCL3-201ENST00000296026 PIK3R4Q99570 1358 aa29.79■■■□□ 2.36
CXCL3-201ENST00000296026 NCOA3Q9Y6Q9 1424 aa29.79■■■□□ 2.36
CXCL3-201ENST00000296026 TRPM2O94759 1503 aa29.76■■■□□ 2.36
CXCL3-201ENST00000296026 C14orf37Q86TY3 774 aa29.76■■■□□ 2.35
CXCL3-201ENST00000296026 NAIPQ13075 1403 aa29.75■■■□□ 2.35
CXCL3-201ENST00000296026 ZNF326Q5BKZ1 582 aaKnown RBP29.73■■■□□ 2.35
CXCL3-201ENST00000296026 RGS17Q9UGC6 210 aaPredicted RBP29.72■■■□□ 2.35
CXCL3-201ENST00000296026 AMOTL2Q9Y2J4 779 aa29.72■■■□□ 2.35
CXCL3-201ENST00000296026 PHLPP1O60346 1717 aa29.71■■■□□ 2.35
CXCL3-201ENST00000296026 PTPRUQ92729 1446 aa29.71■■■□□ 2.35
CXCL3-201ENST00000296026 NRXN3Q9Y4C0 1643 aa29.7■■■□□ 2.34
CXCL3-201ENST00000296026 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.69■■■□□ 2.34
CXCL3-201ENST00000296026 C19orf44Q9H6X5 657 aa29.69■■■□□ 2.34
CXCL3-201ENST00000296026 CLTCL1P53675 1640 aa29.69■■■□□ 2.34
CXCL3-201ENST00000296026 SETBP1Q9Y6X0 1596 aa29.69■■■□□ 2.34
CXCL3-201ENST00000296026 CADPS2Q86UW7 1296 aa29.67■■■□□ 2.34
CXCL3-201ENST00000296026 ATF3P18847 181 aa29.65■■■□□ 2.34
CXCL3-201ENST00000296026 TRIM52Q96A61 297 aa29.63■■■□□ 2.33
CXCL3-201ENST00000296026 JCADQ9P266 1359 aa29.63■■■□□ 2.33
CXCL3-201ENST00000296026 HFM1A2PYH4 1435 aa29.62■■■□□ 2.33
CXCL3-201ENST00000296026 XRN1Q8IZH2 1706 aaKnown RBP29.62■■■□□ 2.33
CXCL3-201ENST00000296026 NEXMIFQ5QGS0 1516 aa29.62■■■□□ 2.33
CXCL3-201ENST00000296026 COL16A1Q07092 1604 aaPredicted RBP29.61■■■□□ 2.33
CXCL3-201ENST00000296026 KIF1BO60333 1816 aa29.61■■■□□ 2.33
CXCL3-201ENST00000296026 METP08581 1390 aa29.6■■■□□ 2.33
CXCL3-201ENST00000296026 POTEAQ6S8J7 498 aa29.56■■■□□ 2.32
CXCL3-201ENST00000296026 AHDC1Q5TGY3 1603 aaPredicted RBP29.55■■■□□ 2.32
CXCL3-201ENST00000296026 DCCP43146 1447 aa29.54■■■□□ 2.32
CXCL3-201ENST00000296026 SLC4A1APQ9BWU0 796 aaKnown RBP29.54■■■□□ 2.32
CXCL3-201ENST00000296026 BRINP3Q76B58 766 aa29.51■■■□□ 2.31
CXCL3-201ENST00000296026 SPATA31A6Q5VVP1 1343 aa29.48■■■□□ 2.31
CXCL3-201ENST00000296026 VGFO15240 615 aaPredicted RBP29.48■■■□□ 2.31
CXCL3-201ENST00000296026 MST1RQ04912 1400 aa29.46■■■□□ 2.31
CXCL3-201ENST00000296026 ADGRL3Q9HAR2 1447 aa29.45■■■□□ 2.31
CXCL3-201ENST00000296026 LRP6O75581 1613 aa29.45■■■□□ 2.31
CXCL3-201ENST00000296026 SHPRHQ149N8 1683 aa29.45■■■□□ 2.31
CXCL3-201ENST00000296026 ASXL1Q8IXJ9 1541 aa29.45■■■□□ 2.3
CXCL3-201ENST00000296026 RPGRIP1LQ68CZ1 1315 aa29.44■■■□□ 2.3
CXCL3-201ENST00000296026 NALCNQ8IZF0 1738 aa29.42■■■□□ 2.3
CXCL3-201ENST00000296026 SETD1AO15047 1707 aaKnown RBP29.42■■■□□ 2.3
CXCL3-201ENST00000296026 FOXD1Q16676 465 aa29.41■■■□□ 2.3
CXCL3-201ENST00000296026 MEX3CQ5U5Q3 659 aaKnown RBP29.41■■■□□ 2.3
CXCL3-201ENST00000296026 PPLO60437 1756 aa29.39■■■□□ 2.3
CXCL3-201ENST00000296026 NHSL1Q5SYE7 1610 aa29.38■■■□□ 2.29
CXCL3-201ENST00000296026 PTCH1Q13635 1447 aa29.37■■■□□ 2.29
CXCL3-201ENST00000296026 ROBO2Q9HCK4 1378 aa29.35■■■□□ 2.29
CXCL3-201ENST00000296026 SETD5Q9C0A6 1442 aa29.35■■■□□ 2.29
CXCL3-201ENST00000296026 NUTM2BA6NNL0 878 aaPredicted RBP29.33■■■□□ 2.29
CXCL3-201ENST00000296026 NUTM2EB1AL46 878 aaPredicted RBP29.33■■■□□ 2.29
CXCL3-201ENST00000296026 NUTM2AQ8IVF1 878 aaPredicted RBP29.33■■■□□ 2.29
CXCL3-201ENST00000296026 CCDC144AA2RUR9 1427 aa29.32■■■□□ 2.28
CXCL3-201ENST00000296026 DDX17Q92841 729 aaKnown RBP29.32■■■□□ 2.28
CXCL3-201ENST00000296026 PRAG1Q86YV5 1406 aa29.31■■■□□ 2.28
CXCL3-201ENST00000296026 ZNF772Q68DY9 489 aaPredicted RBP29.31■■■□□ 2.28
CXCL3-201ENST00000296026 LRRC59Q96AG4 307 aaKnown RBP29.31■■■□□ 2.28
CXCL3-201ENST00000296026 MPHOSPH9Q99550 1183 aa29.31■■■□□ 2.28
CXCL3-201ENST00000296026 C1orf167Q5SNV9 1468 aa29.3■■■□□ 2.28
CXCL3-201ENST00000296026 RGL3Q3MIN7 710 aa29.27■■■□□ 2.28
CXCL3-201ENST00000296026 ADGRF5Q8IZF2 1346 aa29.26■■■□□ 2.27
CXCL3-201ENST00000296026 SPATA31E1Q6ZUB1 1445 aa29.26■■■□□ 2.27
CXCL3-201ENST00000296026 ORAI2Q96SN7 254 aa29.23■■■□□ 2.27
CXCL3-201ENST00000296026 PNPLA6Q8IY17 1366 aa29.23■■■□□ 2.27
CXCL3-201ENST00000296026 IFT172Q9UG01 1749 aa29.21■■■□□ 2.27
CXCL3-201ENST00000296026 ANKRD30BQ9BXX2 1392 aa29.21■■■□□ 2.27
CXCL3-201ENST00000296026 LAMC1P11047 1609 aa29.2■■■□□ 2.27
CXCL3-201ENST00000296026 AFF2P51816 1311 aa29.19■■■□□ 2.26
CXCL3-201ENST00000296026 RXRBP28702 533 aa29.16■■■□□ 2.26
CXCL3-201ENST00000296026 STK26Q9P289 416 aa29.16■■■□□ 2.26
CXCL3-201ENST00000296026 SOS2Q07890 1332 aaPredicted RBP29.16■■■□□ 2.26
CXCL3-201ENST00000296026 ACIN1Q9UKV3 1341 aaKnown RBP29.16■■■□□ 2.26
CXCL3-201ENST00000296026 CDC42BPGQ6DT37 1551 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms