RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 NWD1Q149M9 1564 aa23.45■■□□□ 1.34
SOD1-201ENST00000270142 PPARGC1BQ86YN6 1023 aaKnown RBP23.45■■□□□ 1.34
SOD1-201ENST00000270142 MYO5BQ9ULV0 1848 aa23.45■■□□□ 1.34
SOD1-201ENST00000270142 E9PCH4 1651 aa23.44■■□□□ 1.34
SOD1-201ENST00000270142 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
SOD1-201ENST00000270142 RIMS2Q9UQ26 1411 aa23.44■■□□□ 1.34
SOD1-201ENST00000270142 ITGAEP38570 1179 aa23.44■■□□□ 1.34
SOD1-201ENST00000270142 BCANQ96GW7 911 aa23.44■■□□□ 1.34
SOD1-201ENST00000270142 PLEKHG1Q9ULL1 1385 aa23.43■■□□□ 1.34
SOD1-201ENST00000270142 RBM33Q96EV2 1170 aaKnown RBP23.43■■□□□ 1.34
SOD1-201ENST00000270142 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
SOD1-201ENST00000270142 PROSER2Q86WR7 435 aaPredicted RBP23.42■■□□□ 1.34
SOD1-201ENST00000270142 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
SOD1-201ENST00000270142 CHGAP10645 457 aaKnown RBP23.4■■□□□ 1.34
SOD1-201ENST00000270142 FAM135BQ49AJ0 1406 aa23.4■■□□□ 1.34
SOD1-201ENST00000270142 NUP155O75694 1391 aa23.4■■□□□ 1.34
SOD1-201ENST00000270142 PHF23Q9BUL5 403 aaPredicted RBP23.39■■□□□ 1.33
SOD1-201ENST00000270142 HDGFP51858 240 aaKnown RBP23.37■■□□□ 1.33
SOD1-201ENST00000270142 NUTM2DQ5VT03 806 aaPredicted RBP23.35■■□□□ 1.33
SOD1-201ENST00000270142 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
SOD1-201ENST00000270142 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.33
SOD1-201ENST00000270142 MSH6P52701 1360 aa23.33■■□□□ 1.33
SOD1-201ENST00000270142 CHD2O14647 1828 aaKnown RBP23.33■■□□□ 1.32
SOD1-201ENST00000270142 ADAMTS13Q76LX8 1427 aa23.33■■□□□ 1.32
SOD1-201ENST00000270142 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
SOD1-201ENST00000270142 DIP2AQ14689 1571 aa23.28■■□□□ 1.32
SOD1-201ENST00000270142 RRBP1Q9P2E9 1410 aaKnown RBP23.27■■□□□ 1.32
SOD1-201ENST00000270142 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
SOD1-201ENST00000270142 SPHKAPQ2M3C7 1700 aa23.25■■□□□ 1.31
SOD1-201ENST00000270142 SLAIN2Q9P270 581 aa23.24■■□□□ 1.31
SOD1-201ENST00000270142 RGS17Q9UGC6 210 aaPredicted RBP23.24■■□□□ 1.31
SOD1-201ENST00000270142 NCOA3Q9Y6Q9 1424 aa23.24■■□□□ 1.31
SOD1-201ENST00000270142 TRPM2O94759 1503 aa23.22■■□□□ 1.31
SOD1-201ENST00000270142 PTPRUQ92729 1446 aa23.21■■□□□ 1.31
SOD1-201ENST00000270142 NAIPQ13075 1403 aa23.2■■□□□ 1.3
SOD1-201ENST00000270142 C14orf37Q86TY3 774 aa23.19■■□□□ 1.3
SOD1-201ENST00000270142 NRXN3Q9Y4C0 1643 aa23.19■■□□□ 1.3
SOD1-201ENST00000270142 PHLPP1O60346 1717 aa23.18■■□□□ 1.3
SOD1-201ENST00000270142 ZNF326Q5BKZ1 582 aaKnown RBP23.17■■□□□ 1.3
SOD1-201ENST00000270142 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
SOD1-201ENST00000270142 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
SOD1-201ENST00000270142 CLTCL1P53675 1640 aa23.16■■□□□ 1.3
SOD1-201ENST00000270142 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.16■■□□□ 1.3
SOD1-201ENST00000270142 C19orf44Q9H6X5 657 aa23.14■■□□□ 1.29
SOD1-201ENST00000270142 COL16A1Q07092 1604 aaPredicted RBP23.13■■□□□ 1.29
SOD1-201ENST00000270142 CADPS2Q86UW7 1296 aa23.13■■□□□ 1.29
SOD1-201ENST00000270142 XRN1Q8IZH2 1706 aaKnown RBP23.13■■□□□ 1.29
SOD1-201ENST00000270142 JCADQ9P266 1359 aa23.13■■□□□ 1.29
SOD1-201ENST00000270142 NEXMIFQ5QGS0 1516 aa23.13■■□□□ 1.29
SOD1-201ENST00000270142 ATF3P18847 181 aa23.12■■□□□ 1.29
SOD1-201ENST00000270142 METP08581 1390 aa23.1■■□□□ 1.29
SOD1-201ENST00000270142 HFM1A2PYH4 1435 aa23.09■■□□□ 1.29
SOD1-201ENST00000270142 POTEAQ6S8J7 498 aa23.09■■□□□ 1.29
SOD1-201ENST00000270142 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.29
SOD1-201ENST00000270142 TRIM52Q96A61 297 aa23.07■■□□□ 1.28
SOD1-201ENST00000270142 DCCP43146 1447 aa23.07■■□□□ 1.28
SOD1-201ENST00000270142 KIF1BO60333 1816 aa23.04■■□□□ 1.28
SOD1-201ENST00000270142 BRINP3Q76B58 766 aa23.04■■□□□ 1.28
SOD1-201ENST00000270142 LRP6O75581 1613 aa23.03■■□□□ 1.28
SOD1-201ENST00000270142 MST1RQ04912 1400 aa23.01■■□□□ 1.27
SOD1-201ENST00000270142 SLC4A1APQ9BWU0 796 aaKnown RBP23.01■■□□□ 1.27
SOD1-201ENST00000270142 ASXL1Q8IXJ9 1541 aa23■■□□□ 1.27
SOD1-201ENST00000270142 SPATA31A6Q5VVP1 1343 aa23■■□□□ 1.27
SOD1-201ENST00000270142 ADGRL3Q9HAR2 1447 aa22.99■■□□□ 1.27
SOD1-201ENST00000270142 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
SOD1-201ENST00000270142 SETD1AO15047 1707 aaKnown RBP22.96■■□□□ 1.27
SOD1-201ENST00000270142 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
SOD1-201ENST00000270142 VGFO15240 615 aaPredicted RBP22.96■■□□□ 1.27
SOD1-201ENST00000270142 PTCH1Q13635 1447 aa22.94■■□□□ 1.26
SOD1-201ENST00000270142 MEX3CQ5U5Q3 659 aaKnown RBP22.94■■□□□ 1.26
SOD1-201ENST00000270142 NHSL1Q5SYE7 1610 aa22.93■■□□□ 1.26
SOD1-201ENST00000270142 RPGRIP1LQ68CZ1 1315 aa22.93■■□□□ 1.26
SOD1-201ENST00000270142 FOXD1Q16676 465 aa22.93■■□□□ 1.26
SOD1-201ENST00000270142 SETD5Q9C0A6 1442 aa22.92■■□□□ 1.26
SOD1-201ENST00000270142 ROBO2Q9HCK4 1378 aa22.92■■□□□ 1.26
SOD1-201ENST00000270142 PPLO60437 1756 aa22.91■■□□□ 1.26
SOD1-201ENST00000270142 PRAG1Q86YV5 1406 aa22.9■■□□□ 1.26
SOD1-201ENST00000270142 DDX17Q92841 729 aaKnown RBP22.89■■□□□ 1.25
SOD1-201ENST00000270142 NUTM2BA6NNL0 878 aaPredicted RBP22.88■■□□□ 1.25
SOD1-201ENST00000270142 NUTM2EB1AL46 878 aaPredicted RBP22.88■■□□□ 1.25
SOD1-201ENST00000270142 NUTM2AQ8IVF1 878 aaPredicted RBP22.88■■□□□ 1.25
SOD1-201ENST00000270142 C1orf167Q5SNV9 1468 aa22.87■■□□□ 1.25
SOD1-201ENST00000270142 ZNF772Q68DY9 489 aaPredicted RBP22.87■■□□□ 1.25
SOD1-201ENST00000270142 CCDC144AA2RUR9 1427 aa22.86■■□□□ 1.25
SOD1-201ENST00000270142 LRRC59Q96AG4 307 aaKnown RBP22.85■■□□□ 1.25
SOD1-201ENST00000270142 MPHOSPH9Q99550 1183 aa22.83■■□□□ 1.25
SOD1-201ENST00000270142 PNPLA6Q8IY17 1366 aa22.83■■□□□ 1.25
SOD1-201ENST00000270142 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
SOD1-201ENST00000270142 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
SOD1-201ENST00000270142 RGL3Q3MIN7 710 aa22.81■■□□□ 1.24
SOD1-201ENST00000270142 ORAI2Q96SN7 254 aa22.8■■□□□ 1.24
SOD1-201ENST00000270142 LAMC1P11047 1609 aa22.79■■□□□ 1.24
SOD1-201ENST00000270142 AFF2P51816 1311 aa22.79■■□□□ 1.24
SOD1-201ENST00000270142 IFT172Q9UG01 1749 aa22.77■■□□□ 1.24
SOD1-201ENST00000270142 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
SOD1-201ENST00000270142 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
SOD1-201ENST00000270142 RXRBP28702 533 aa22.75■■□□□ 1.23
SOD1-201ENST00000270142 CDC42BPGQ6DT37 1551 aa22.75■■□□□ 1.23
SOD1-201ENST00000270142 C8orf37Q96NL8 207 aa22.74■■□□□ 1.23
SOD1-201ENST00000270142 TECPR2O15040 1411 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms