RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 NAIPQ13075 1403 aa19.29■□□□□ 0.68
TIMP3-201ENST00000266085 RRP1P56182 461 aaKnown RBP19.28■□□□□ 0.68
TIMP3-201ENST00000266085 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
TIMP3-201ENST00000266085 HMOX1P09601 288 aa19.28■□□□□ 0.68
TIMP3-201ENST00000266085 EXOC6Q8TAG9 804 aa19.28■□□□□ 0.68
TIMP3-201ENST00000266085 RUNDC1Q96C34 613 aa19.28■□□□□ 0.68
TIMP3-201ENST00000266085 TSHZ2Q9NRE2 1034 aa19.28■□□□□ 0.68
TIMP3-201ENST00000266085 MTHFSP49914 203 aa19.28■□□□□ 0.68
TIMP3-201ENST00000266085 MFAP1P55081 439 aaKnown RBP19.28■□□□□ 0.68
TIMP3-201ENST00000266085 NUTM2GQ5VZR2 741 aa19.28■□□□□ 0.68
TIMP3-201ENST00000266085 ATF3P18847 181 aa19.27■□□□□ 0.68
TIMP3-201ENST00000266085 SUPT6HQ7KZ85 1726 aaKnown RBP19.27■□□□□ 0.68
TIMP3-201ENST00000266085 NLRP6P59044 892 aa19.27■□□□□ 0.68
TIMP3-201ENST00000266085 TRIM6-TRIM34B2RNG4 842 aa19.27■□□□□ 0.67
TIMP3-201ENST00000266085 DNTTIP2Q5QJE6 756 aaKnown RBP19.26■□□□□ 0.67
TIMP3-201ENST00000266085 SLKQ9H2G2 1235 aaPredicted RBP19.26■□□□□ 0.67
TIMP3-201ENST00000266085 GLIPR1L2Q4G1C9 344 aa19.26■□□□□ 0.67
TIMP3-201ENST00000266085 SLC12A5Q9H2X9 1139 aa19.26■□□□□ 0.67
TIMP3-201ENST00000266085 CUL7Q14999 1698 aa19.25■□□□□ 0.67
TIMP3-201ENST00000266085 GPATCH3Q96I76 525 aa19.25■□□□□ 0.67
TIMP3-201ENST00000266085 PCF11O94913 1555 aaKnown RBP19.25■□□□□ 0.67
TIMP3-201ENST00000266085 CENPQQ7L2Z9 268 aaPredicted RBP19.24■□□□□ 0.67
TIMP3-201ENST00000266085 THEMISQ8N1K5 641 aaPredicted RBP19.24■□□□□ 0.67
TIMP3-201ENST00000266085 CRBNQ96SW2 442 aa19.24■□□□□ 0.67
TIMP3-201ENST00000266085 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
TIMP3-201ENST00000266085 UNC13AQ9UPW8 1703 aa19.24■□□□□ 0.67
TIMP3-201ENST00000266085 ADAMTS8Q9UP79 889 aa19.24■□□□□ 0.67
TIMP3-201ENST00000266085 ROCK1Q13464 1354 aa19.22■□□□□ 0.67
TIMP3-201ENST00000266085 GBP4Q96PP9 640 aa19.22■□□□□ 0.67
TIMP3-201ENST00000266085 GTF2E1P29083 439 aaPredicted RBP19.21■□□□□ 0.67
TIMP3-201ENST00000266085 NECTIN2Q92692 538 aa19.21■□□□□ 0.67
TIMP3-201ENST00000266085 SLC26A8Q96RN1 970 aa19.21■□□□□ 0.67
TIMP3-201ENST00000266085 TTC5Q8N0Z6 440 aa19.2■□□□□ 0.66
TIMP3-201ENST00000266085 CD109Q6YHK3 1445 aa19.2■□□□□ 0.66
TIMP3-201ENST00000266085 IPO9Q96P70 1041 aaKnown RBP19.2■□□□□ 0.66
TIMP3-201ENST00000266085 CCDC141Q6ZP82 1450 aa19.19■□□□□ 0.66
TIMP3-201ENST00000266085 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
TIMP3-201ENST00000266085 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
TIMP3-201ENST00000266085 PROSER2Q86WR7 435 aaPredicted RBP19.18■□□□□ 0.66
TIMP3-201ENST00000266085 ANKRD45Q5TZF3 282 aa19.18■□□□□ 0.66
TIMP3-201ENST00000266085 RAPGEF4Q8WZA2 1011 aa19.17■□□□□ 0.66
TIMP3-201ENST00000266085 ABTB2Q8N961 1025 aa19.17■□□□□ 0.66
TIMP3-201ENST00000266085 NLRP2Q9NX02 1062 aa19.17■□□□□ 0.66
TIMP3-201ENST00000266085 CABP1Q9NZU7 370 aa19.17■□□□□ 0.66
TIMP3-201ENST00000266085 ABCC5O15440 1437 aa19.17■□□□□ 0.66
TIMP3-201ENST00000266085 NRDCO43847 1150 aa19.17■□□□□ 0.66
TIMP3-201ENST00000266085 TCP11L2Q8N4U5 519 aa19.17■□□□□ 0.66
TIMP3-201ENST00000266085 ISY1Q9ULR0 285 aaKnown RBP19.17■□□□□ 0.66
TIMP3-201ENST00000266085 GNAI1P63096 354 aa19.16■□□□□ 0.66
TIMP3-201ENST00000266085 ESCO1Q5FWF5 840 aa19.16■□□□□ 0.66
TIMP3-201ENST00000266085 L1TD1Q5T7N2 865 aaKnown RBP19.16■□□□□ 0.66
TIMP3-201ENST00000266085 DZIP1LQ8IYY4 767 aaKnown RBP19.16■□□□□ 0.66
TIMP3-201ENST00000266085 ERBINQ96RT1 1412 aa19.16■□□□□ 0.66
TIMP3-201ENST00000266085 CDK19Q9BWU1 502 aa19.16■□□□□ 0.66
TIMP3-201ENST00000266085 ANKRD30BQ9BXX2 1392 aa19.15■□□□□ 0.66
TIMP3-201ENST00000266085 GOLGA6L6A8MZA4 724 aa19.15■□□□□ 0.66
TIMP3-201ENST00000266085 DDX19BQ9UMR2 479 aa19.15■□□□□ 0.66
TIMP3-201ENST00000266085 API5Q9BZZ5 524 aaKnown RBP19.15■□□□□ 0.66
TIMP3-201ENST00000266085 TULP1O00294 542 aaPredicted RBP19.15■□□□□ 0.66
TIMP3-201ENST00000266085 GNL2Q13823 731 aaKnown RBP19.15■□□□□ 0.66
TIMP3-201ENST00000266085 RPGRIP1LQ68CZ1 1315 aa19.14■□□□□ 0.66
TIMP3-201ENST00000266085 NEXNQ0ZGT2 675 aa19.14■□□□□ 0.66
TIMP3-201ENST00000266085 TSPYL4Q9UJ04 414 aa19.14■□□□□ 0.66
TIMP3-201ENST00000266085 CAMSAP2Q08AD1 1489 aa19.14■□□□□ 0.65
TIMP3-201ENST00000266085 FKBP5Q13451 457 aaPredicted RBP19.13■□□□□ 0.65
TIMP3-201ENST00000266085 SYTL4Q96C24 671 aaPredicted RBP19.13■□□□□ 0.65
TIMP3-201ENST00000266085 C9orf78Q9NZ63 289 aaPredicted RBP19.13■□□□□ 0.65
TIMP3-201ENST00000266085 PDE4AP27815 886 aa19.12■□□□□ 0.65
TIMP3-201ENST00000266085 FAM161AQ3B820 660 aa19.12■□□□□ 0.65
TIMP3-201ENST00000266085 TMX4Q9H1E5 349 aaPredicted RBP19.12■□□□□ 0.65
TIMP3-201ENST00000266085 GPRASP1Q5JY77 1395 aa19.12■□□□□ 0.65
TIMP3-201ENST00000266085 PTMSP20962 102 aa19.12■□□□□ 0.65
TIMP3-201ENST00000266085 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
TIMP3-201ENST00000266085 CDCA7LQ96GN5 454 aa19.11■□□□□ 0.65
TIMP3-201ENST00000266085 MAP3K1Q13233 1512 aa19.11■□□□□ 0.65
TIMP3-201ENST00000266085 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
TIMP3-201ENST00000266085 ADGRL1O94910 1474 aa19.1■□□□□ 0.65
TIMP3-201ENST00000266085 NCOA1Q15788 1441 aa19.1■□□□□ 0.65
TIMP3-201ENST00000266085 DEKP35659 375 aaKnown RBP19.1■□□□□ 0.65
TIMP3-201ENST00000266085 ANKLE2Q86XL3 938 aa19.1■□□□□ 0.65
TIMP3-201ENST00000266085 KIF16BQ96L93 1317 aa19.09■□□□□ 0.65
TIMP3-201ENST00000266085 FRAT2O75474 233 aaPredicted RBP19.09■□□□□ 0.65
TIMP3-201ENST00000266085 RILPL2Q969X0 211 aa19.08■□□□□ 0.65
TIMP3-201ENST00000266085 ST18O60284 1047 aa19.08■□□□□ 0.64
TIMP3-201ENST00000266085 RTN4Q9NQC3 1192 aaKnown RBP19.08■□□□□ 0.64
TIMP3-201ENST00000266085 HTATSF1O43719 755 aaKnown RBP19.07■□□□□ 0.64
TIMP3-201ENST00000266085 ZNF692Q9BU19 519 aaPredicted RBP19.07■□□□□ 0.64
TIMP3-201ENST00000266085 GZF1Q9H116 711 aaPredicted RBP19.07■□□□□ 0.64
TIMP3-201ENST00000266085 POGZQ7Z3K3 1410 aa19.07■□□□□ 0.64
TIMP3-201ENST00000266085 NOL8Q76FK4 1167 aaKnown RBP19.07■□□□□ 0.64
TIMP3-201ENST00000266085 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
TIMP3-201ENST00000266085 DDX58O95786 925 aaKnown RBP19.06■□□□□ 0.64
TIMP3-201ENST00000266085 AKNAQ7Z591 1439 aa19.06■□□□□ 0.64
TIMP3-201ENST00000266085 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
TIMP3-201ENST00000266085 RTEL1-TNFRSF6BF6WH68 1400 aa19.05■□□□□ 0.64
TIMP3-201ENST00000266085 PANK1Q8TE04 598 aa19.05■□□□□ 0.64
TIMP3-201ENST00000266085 NAP1L5Q96NT1 182 aaPredicted RBP19.05■□□□□ 0.64
TIMP3-201ENST00000266085 KIF14Q15058 1648 aa19.05■□□□□ 0.64
TIMP3-201ENST00000266085 PNISRQ8TF01 805 aaKnown RBP19.04■□□□□ 0.64
TIMP3-201ENST00000266085 USP35Q9P2H5 1018 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms