RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 NUP155O75694 1391 aa35.17■■■■□ 3.22
HMG20B-201ENST00000262949 SENP3Q9H4L4 574 aaPredicted RBP35.15■■■■□ 3.22
HMG20B-201ENST00000262949 PROSER2Q86WR7 435 aaPredicted RBP35.13■■■■□ 3.21
HMG20B-201ENST00000262949 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.11■■■■□ 3.21
HMG20B-201ENST00000262949 RIMS2Q9UQ26 1411 aa35.11■■■■□ 3.21
HMG20B-201ENST00000262949 TMEM94Q12767 1356 aa35.11■■■■□ 3.21
HMG20B-201ENST00000262949 IQGAP3Q86VI3 1631 aa35.1■■■■□ 3.21
HMG20B-201ENST00000262949 PLEKHG1Q9ULL1 1385 aa35.09■■■■□ 3.21
HMG20B-201ENST00000262949 ZFYVE9O95405 1425 aa35.08■■■■□ 3.21
HMG20B-201ENST00000262949 E9PCH4 1651 aa35.08■■■■□ 3.21
HMG20B-201ENST00000262949 TMEM131LA2VDJ0 1609 aa35.06■■■■□ 3.2
HMG20B-201ENST00000262949 MED1Q15648 1581 aaPredicted RBP35.04■■■■□ 3.2
HMG20B-201ENST00000262949 XIRP1Q702N8 1843 aaKnown RBP35.03■■■■□ 3.2
HMG20B-201ENST00000262949 NKTRP30414 1462 aaKnown RBP35.03■■■■□ 3.2
HMG20B-201ENST00000262949 MYO5BQ9ULV0 1848 aa35.02■■■■□ 3.2
HMG20B-201ENST00000262949 PHF23Q9BUL5 403 aaPredicted RBP35.01■■■■□ 3.2
HMG20B-201ENST00000262949 RBM33Q96EV2 1170 aaKnown RBP35■■■■□ 3.19
HMG20B-201ENST00000262949 TBX22Q9Y458 520 aa34.99■■■■□ 3.19
HMG20B-201ENST00000262949 NWD1Q149M9 1564 aa34.97■■■■□ 3.19
HMG20B-201ENST00000262949 NUTM2DQ5VT03 806 aaPredicted RBP34.97■■■■□ 3.19
HMG20B-201ENST00000262949 FAM135BQ49AJ0 1406 aa34.97■■■■□ 3.19
HMG20B-201ENST00000262949 MSH6P52701 1360 aa34.96■■■■□ 3.19
HMG20B-201ENST00000262949 RRBP1Q9P2E9 1410 aaKnown RBP34.96■■■■□ 3.19
HMG20B-201ENST00000262949 CHD2O14647 1828 aaKnown RBP34.88■■■■□ 3.17
HMG20B-201ENST00000262949 C14orf37Q86TY3 774 aa34.86■■■■□ 3.17
HMG20B-201ENST00000262949 ZNF326Q5BKZ1 582 aaKnown RBP34.85■■■■□ 3.17
HMG20B-201ENST00000262949 DIP2AQ14689 1571 aa34.84■■■■□ 3.17
HMG20B-201ENST00000262949 ADAMTS13Q76LX8 1427 aa34.84■■■■□ 3.17
HMG20B-201ENST00000262949 SLAIN2Q9P270 581 aa34.84■■■■□ 3.17
HMG20B-201ENST00000262949 PIK3R4Q99570 1358 aa34.84■■■■□ 3.17
HMG20B-201ENST00000262949 NAIPQ13075 1403 aa34.81■■■■□ 3.16
HMG20B-201ENST00000262949 NCOA3Q9Y6Q9 1424 aa34.81■■■■□ 3.16
HMG20B-201ENST00000262949 SPHKAPQ2M3C7 1700 aa34.81■■■■□ 3.16
HMG20B-201ENST00000262949 ROBO1Q9Y6N7 1651 aa34.79■■■■□ 3.16
HMG20B-201ENST00000262949 TRIM52Q96A61 297 aa34.78■■■■□ 3.16
HMG20B-201ENST00000262949 TRPM2O94759 1503 aa34.76■■■■□ 3.16
HMG20B-201ENST00000262949 AMOTL2Q9Y2J4 779 aa34.76■■■■□ 3.16
HMG20B-201ENST00000262949 C19orf44Q9H6X5 657 aa34.73■■■■□ 3.15
HMG20B-201ENST00000262949 ATF3P18847 181 aa34.72■■■■□ 3.15
HMG20B-201ENST00000262949 CADPS2Q86UW7 1296 aa34.72■■■■□ 3.15
HMG20B-201ENST00000262949 HFM1A2PYH4 1435 aa34.71■■■■□ 3.15
HMG20B-201ENST00000262949 SLC4A1APQ9BWU0 796 aaKnown RBP34.66■■■■□ 3.14
HMG20B-201ENST00000262949 SETBP1Q9Y6X0 1596 aa34.64■■■■□ 3.14
HMG20B-201ENST00000262949 PTPRUQ92729 1446 aa34.64■■■■□ 3.14
HMG20B-201ENST00000262949 CLTCL1P53675 1640 aa34.63■■■■□ 3.13
HMG20B-201ENST00000262949 PHLPP1O60346 1717 aa34.6■■■■□ 3.13
HMG20B-201ENST00000262949 KIF1BO60333 1816 aa34.59■■■■□ 3.13
HMG20B-201ENST00000262949 JCADQ9P266 1359 aa34.59■■■■□ 3.13
HMG20B-201ENST00000262949 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.58■■■■□ 3.13
HMG20B-201ENST00000262949 VGFO15240 615 aaPredicted RBP34.58■■■■□ 3.13
HMG20B-201ENST00000262949 NRXN3Q9Y4C0 1643 aa34.58■■■■□ 3.13
HMG20B-201ENST00000262949 NEXMIFQ5QGS0 1516 aa34.56■■■■□ 3.12
HMG20B-201ENST00000262949 RGS17Q9UGC6 210 aaPredicted RBP34.56■■■■□ 3.12
HMG20B-201ENST00000262949 METP08581 1390 aa34.56■■■■□ 3.12
HMG20B-201ENST00000262949 DCCP43146 1447 aa34.52■■■■□ 3.12
HMG20B-201ENST00000262949 RPGRIP1LQ68CZ1 1315 aa34.52■■■■□ 3.12
HMG20B-201ENST00000262949 XRN1Q8IZH2 1706 aaKnown RBP34.51■■■■□ 3.12
HMG20B-201ENST00000262949 BRINP3Q76B58 766 aa34.46■■■■□ 3.11
HMG20B-201ENST00000262949 COL16A1Q07092 1604 aaPredicted RBP34.45■■■■□ 3.11
HMG20B-201ENST00000262949 SPATA31A6Q5VVP1 1343 aa34.44■■■■□ 3.1
HMG20B-201ENST00000262949 AHDC1Q5TGY3 1603 aaPredicted RBP34.43■■■■□ 3.1
HMG20B-201ENST00000262949 FOXD1Q16676 465 aa34.42■■■■□ 3.1
HMG20B-201ENST00000262949 ADGRL3Q9HAR2 1447 aa34.4■■■■□ 3.1
HMG20B-201ENST00000262949 MEX3CQ5U5Q3 659 aaKnown RBP34.4■■■■□ 3.1
HMG20B-201ENST00000262949 POTEAQ6S8J7 498 aa34.4■■■■□ 3.1
HMG20B-201ENST00000262949 CCDC144AA2RUR9 1427 aa34.38■■■■□ 3.09
HMG20B-201ENST00000262949 MST1RQ04912 1400 aa34.38■■■■□ 3.09
HMG20B-201ENST00000262949 MPHOSPH9Q99550 1183 aa34.37■■■■□ 3.09
HMG20B-201ENST00000262949 ACIN1Q9UKV3 1341 aaKnown RBP34.36■■■■□ 3.09
HMG20B-201ENST00000262949 ASXL1Q8IXJ9 1541 aa34.34■■■■□ 3.09
HMG20B-201ENST00000262949 PTCH1Q13635 1447 aa34.33■■■■□ 3.09
HMG20B-201ENST00000262949 RGL3Q3MIN7 710 aa34.31■■■■□ 3.08
HMG20B-201ENST00000262949 LRRC59Q96AG4 307 aaKnown RBP34.29■■■■□ 3.08
HMG20B-201ENST00000262949 PPLO60437 1756 aa34.28■■■■□ 3.08
HMG20B-201ENST00000262949 SHPRHQ149N8 1683 aa34.28■■■■□ 3.08
HMG20B-201ENST00000262949 ROBO2Q9HCK4 1378 aa34.28■■■■□ 3.08
HMG20B-201ENST00000262949 ZNF772Q68DY9 489 aaPredicted RBP34.27■■■■□ 3.08
HMG20B-201ENST00000262949 NUTM2BA6NNL0 878 aaPredicted RBP34.26■■■■□ 3.08
HMG20B-201ENST00000262949 NUTM2EB1AL46 878 aaPredicted RBP34.26■■■■□ 3.08
HMG20B-201ENST00000262949 NUTM2AQ8IVF1 878 aaPredicted RBP34.26■■■■□ 3.08
HMG20B-201ENST00000262949 NALCNQ8IZF0 1738 aa34.26■■■■□ 3.07
HMG20B-201ENST00000262949 LRP6O75581 1613 aa34.26■■■■□ 3.07
HMG20B-201ENST00000262949 ANKRD30BQ9BXX2 1392 aa34.24■■■■□ 3.07
HMG20B-201ENST00000262949 SETD1AO15047 1707 aaKnown RBP34.24■■■■□ 3.07
HMG20B-201ENST00000262949 SETD5Q9C0A6 1442 aa34.24■■■■□ 3.07
HMG20B-201ENST00000262949 ADGRF5Q8IZF2 1346 aa34.22■■■■□ 3.07
HMG20B-201ENST00000262949 PRAG1Q86YV5 1406 aa34.21■■■■□ 3.07
HMG20B-201ENST00000262949 C1orf167Q5SNV9 1468 aa34.21■■■■□ 3.07
HMG20B-201ENST00000262949 NHSL1Q5SYE7 1610 aa34.2■■■■□ 3.07
HMG20B-201ENST00000262949 SPATA31E1Q6ZUB1 1445 aa34.2■■■■□ 3.06
HMG20B-201ENST00000262949 DDX17Q92841 729 aaKnown RBP34.19■■■■□ 3.06
HMG20B-201ENST00000262949 STK26Q9P289 416 aa34.15■■■■□ 3.06
HMG20B-201ENST00000262949 ORAI2Q96SN7 254 aa34.13■■■■□ 3.05
HMG20B-201ENST00000262949 PNPLA6Q8IY17 1366 aa34.1■■■■□ 3.05
HMG20B-201ENST00000262949 LRPPRCP42704 1394 aaKnown RBP34.09■■■■□ 3.05
HMG20B-201ENST00000262949 TMEM132EQ6IEE7 984 aa34.07■■■■□ 3.04
HMG20B-201ENST00000262949 AFF2P51816 1311 aa34.06■■■■□ 3.04
HMG20B-201ENST00000262949 RXRBP28702 533 aa34.06■■■■□ 3.04
HMG20B-201ENST00000262949 ESCO1Q5FWF5 840 aa34.06■■■■□ 3.04
HMG20B-201ENST00000262949 SOS2Q07890 1332 aaPredicted RBP34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms