RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 MyclP10166 368 aa22.69■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Gripap1Q8VD04 806 aa22.69■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Efcab5A0JP43 1406 aa22.69■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Nectin2P32507 530 aa22.69■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Nutm1Q8BHP2 1126 aa22.68■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Utp3Q9JI13 469 aaKnown RBP22.68■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Mink1Q9JM52 1308 aa22.67■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Phactr2B1AVP0 632 aa22.67■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Q9D2X8 372 aa22.66■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Nek4Q9Z1J2 792 aa22.66■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Ccer1Q9CQL2 403 aa22.65■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Kif4P33174 1231 aa22.65■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Ipo4Q8VI75 1082 aa22.64■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Chmp4cQ9D7F7 232 aa22.64■■□□□ 1.22
Ebf3-201ENSMUST00000033378 Sh3bgrQ9WUZ7 214 aa22.64■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Nap1l3Q794H2 544 aa22.63■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Cetn4Q8K4K1 168 aa22.63■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Ppp1r18Q8BQ30 594 aa22.63■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Iqgap2Q3UQ44 1575 aa22.63■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Rbm25B2RY56 838 aaKnown RBP22.63■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Shq1Q7TMX5 569 aa22.62■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Ttll5Q8CHB8 1328 aa22.62■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Dhx9O70133 1380 aaKnown RBP22.62■■□□□ 1.21
Ebf3-201ENSMUST00000033378 SkilQ60665 675 aa22.61■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Ric3Q8BPM6 367 aa22.61■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Rab3gap2Q8BMG7 1366 aa22.61■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Ciz1Q8VEH2 845 aa22.6■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Usp16Q99LG0 825 aa22.6■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Rnf214Q8BFU3 668 aaKnown RBP22.6■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Pde4cQ3UEI1 686 aa22.6■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Tpm3-rs7D3Z2H9 248 aa22.59■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Polr3gQ6NXY9 223 aa22.59■■□□□ 1.21
Ebf3-201ENSMUST00000033378 KinQ8K339 391 aa22.59■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Jph4Q80WT0 628 aa22.59■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Nol10Q5RJG1 687 aaKnown RBP22.58■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Apaf1O88879 1249 aa22.58■■□□□ 1.21
Ebf3-201ENSMUST00000033378 PogkQ80TC5 607 aa22.58■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Chmp3Q9CQ10 224 aa22.58■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Myom3A2ABU4 1439 aa22.58■■□□□ 1.21
Ebf3-201ENSMUST00000033378 Rrp9Q91WM3 475 aaKnown RBP22.57■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Stk11ipQ3TAA7 1072 aa22.57■■□□□ 1.2
Ebf3-201ENSMUST00000033378 NrkQ9R0G8 1455 aa22.57■■□□□ 1.2
Ebf3-201ENSMUST00000033378 ErbinQ80TH2 1402 aa22.57■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Swt1Q9DBQ9 907 aa22.57■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Tiam1Q60610 1591 aa22.57■■□□□ 1.2
Ebf3-201ENSMUST00000033378 PtprkP35822 1457 aa22.56■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Rad54l2Q99NG0 1466 aa22.56■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Gnai1B2RSH2 354 aa22.56■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Gnai3Q9DC51 354 aa22.56■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Cabp4Q8VHC5 271 aa22.55■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Phf14Q9D4H9 881 aa22.55■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Puf60Q3UEB3 564 aaKnown RBP22.55■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Nsd2Q8BVE8 1365 aa22.54■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Nol12Q8BG17 217 aa22.54■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Map3k1P53349 1493 aa22.54■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Tomm22Q9CPQ3 142 aa22.54■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Samd1D3YXK1 519 aa22.53■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Mical1Q8VDP3 1048 aa22.53■■□□□ 1.2
Ebf3-201ENSMUST00000033378 Sptbn5F6UCX4 1208 aa22.51■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Smc3Q9CW03 1217 aaKnown RBP22.51■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Ncoa2Q61026 1462 aa22.5■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Gprasp1Q5U4C1 1347 aa22.5■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Ssh1Q76I79 1042 aa22.5■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Map7d2A2AG50 781 aa22.5■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Tpd52l1O54818 204 aa22.5■■□□□ 1.19
Ebf3-201ENSMUST00000033378 1700010I14RikQ7TPG0 532 aa22.49■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Gtf2a1Q99PM3 378 aa22.49■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Cd109Q8R422 1442 aa22.49■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Bicd2Q921C5 820 aa22.48■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Polr1aO35134 1717 aaKnown RBP22.48■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Tpm2P58774 284 aa22.48■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Mroh2bQ7M6Y6 1581 aa22.48■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Ccdc173A0JLY1 547 aa22.47■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Cog6Q8R3I3 657 aa22.47■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Hmox1P14901 289 aa22.47■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Taf3Q5HZG4 932 aa22.46■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Tceal9Q9DD24 104 aa22.46■■□□□ 1.19
Ebf3-201ENSMUST00000033378 Rbm10Q99KG3 930 aaKnown RBP22.45■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Ccdc171E9Q1U1 1324 aa22.45■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Gsto1O09131 240 aa22.45■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Cavin4A2AMM0 362 aa22.44■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Cyp46a1Q9WVK8 500 aa22.44■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Kif18aQ91WD7 886 aa22.44■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Isy1Q69ZQ2 285 aaKnown RBP22.44■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Tspyl2Q7TQI8 677 aa22.44■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Mad1l1Q9WTX8 717 aaKnown RBP22.43■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Dixdc1Q80Y83 711 aa22.43■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Ap3b2Q9JME5 1082 aa22.43■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Prdm16A2A935 1275 aa22.42■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Zkscan1Q8BGS3 561 aaKnown RBP22.42■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Mcm2P97310 904 aa22.42■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Liat1Q810M6 228 aa22.42■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Duox2A2AQ99 1517 aa22.41■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Rsph4aQ8BYM7 716 aa22.41■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Naip2Q9QUK4 1447 aa22.41■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Tpm3P21107 285 aaKnown RBP22.41■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Dusp27Q148W8 1138 aa22.4■■□□□ 1.18
Ebf3-201ENSMUST00000033378 PrxO55103 1391 aa22.4■■□□□ 1.18
Ebf3-201ENSMUST00000033378 Paxip1Q6NZQ4 1056 aa22.4■■□□□ 1.18
Ebf3-201ENSMUST00000033378 AppP12023 770 aa22.39■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms