RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SPAG5Q96R06 1193 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 OSBPL7Q9BZF2 842 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 DEF6Q9H4E7 631 aa18.58■□□□□ 0.56
PHGDH-234ENST00000642041 RC3H2Q9HBD1 1191 aaKnown RBP18.58■□□□□ 0.56
PHGDH-234ENST00000642041 FAM207AQ9NSI2 230 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-234ENST00000642041 EXTL3O43909 919 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 CAND2O75155 1236 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 GLP2RO95838 553 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 CYP2J2P51589 502 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 KCNA1Q09470 495 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 KCNMA1Q12791 1236 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 MAPK6Q16659 721 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 KLHDC7AQ5VTJ3 777 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 PDXDC1Q6P996 788 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 ENOSF1Q7L5Y1 443 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 RMDN1Q96DB5 314 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 EEF2KMTQ96G04 330 aa18.57■□□□□ 0.56
PHGDH-234ENST00000642041 LSM14BQ9BX40 385 aaKnown RBP18.57■□□□□ 0.56
PHGDH-234ENST00000642041 MRPL4Q9BYD3 311 aaKnown RBP18.57■□□□□ 0.56
PHGDH-234ENST00000642041 BARX2Q9UMQ3 279 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-234ENST00000642041 LRRIQ4A6NIV6 560 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 H3BRB1 525 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 LCA5LO95447 670 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 FERP16591 822 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 GLRA2P23416 452 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 MARK3P27448 753 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 STAT1P42224 750 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 SNRNP35Q16560 246 aaKnown RBP18.56■□□□□ 0.56
PHGDH-234ENST00000642041 CDCA2Q69YH5 1023 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-234ENST00000642041 RRAGAQ7L523 313 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 IFNLR1Q8IU57 520 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-234ENST00000642041 C16orf70Q9BSU1 422 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 TUT1Q9H6E5 874 aaKnown RBP18.56■□□□□ 0.56
PHGDH-234ENST00000642041 GPRC5CQ9NQ84 441 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 AGPAT5Q9NUQ2 364 aa18.56■□□□□ 0.56
PHGDH-234ENST00000642041 UCHL3P15374 230 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 DNAJB1P25685 340 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 PON1P27169 355 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 NRIP1P48552 1158 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 KRT39Q6A163 491 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 TRMT1LQ7Z2T5 733 aaKnown RBP18.55■□□□□ 0.56
PHGDH-234ENST00000642041 ZBTB33Q86T24 672 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 REXO1L1PQ8IX06 675 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 SPPL3Q8TCT6 385 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 ZNF689Q96CS4 500 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-234ENST00000642041 C16orf45Q96MC5 204 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-234ENST00000642041 STK33Q9BYT3 514 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 NHEJ1Q9H9Q4 299 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-234ENST00000642041 TRMT1Q9NXH9 659 aaKnown RBP18.55■□□□□ 0.56
PHGDH-234ENST00000642041 GCNT4Q9P109 453 aa18.55■□□□□ 0.56
PHGDH-234ENST00000642041 MYO10Q9HD67 2058 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 C17orf102A2RUQ5 167 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 AKR1B10O60218 316 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 TOM1L1O75674 476 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 GNAT1P11488 350 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 HOXC8P31273 242 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 PRKCIP41743 596 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 PHKA2P46019 1235 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 CASP4P49662 377 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 POLR2FP61218 127 aaKnown RBP18.54■□□□□ 0.56
PHGDH-234ENST00000642041 MYL7Q01449 175 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 NCBP1Q09161 790 aaKnown RBP18.54■□□□□ 0.56
PHGDH-234ENST00000642041 KIF5AQ12840 1032 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 BTG3Q14201 252 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-234ENST00000642041 FAM187BQ17R55 369 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 UBALD2Q8IYN6 164 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 BAP1Q92560 729 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 JAKMIP2Q96AA8 810 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 CNTNAP3BQ96NU0 1288 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 FNBP1Q96RU3 617 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 MAP7D2Q96T17 732 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 CNTNAP3Q9BZ76 1288 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 INO80BQ9C086 356 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-234ENST00000642041 TMEM8AQ9HCN3 771 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 PRMT7Q9NVM4 692 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-234ENST00000642041 SUCLA2Q9P2R7 463 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-234ENST00000642041 COQ4Q9Y3A0 265 aa18.54■□□□□ 0.56
PHGDH-234ENST00000642041 CEP250Q9BV73 2442 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 NRCAMQ92823 1304 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 TMEM150BA6NC51 233 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 SOWAHDA6NJG2 315 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 ITGB1P05556 798 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 CTSHP09668 335 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 PPFIA1Q13136 1202 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 ASIC2Q16515 512 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 ASTLQ6HA08 431 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-234ENST00000642041 RBM23Q86U06 439 aaKnown RBP18.53■□□□□ 0.56
PHGDH-234ENST00000642041 ZNF410Q86VK4 478 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 KREMEN2Q8NCW0 462 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 PARD3BQ8TEW8 1205 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 PRPF31Q8WWY3 499 aaKnown RBP18.53■□□□□ 0.56
PHGDH-234ENST00000642041 TMEM143Q96AN5 459 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 FAXDC2Q96IV6 333 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 APEX2Q9UBZ4 518 aa18.53■□□□□ 0.56
PHGDH-234ENST00000642041 AGO2Q9UKV8 859 aaKnown RBP18.53■□□□□ 0.56
PHGDH-234ENST00000642041 TTC3P53804 2025 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 ACKR2O00590 384 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 CLDN3O15551 220 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 TREHO43280 583 aa18.52■□□□□ 0.56
PHGDH-234ENST00000642041 MXI1P50539 228 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms