RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 SLC39A7Q92504 469 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 EBF1Q9UH73 591 aa12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 EVLQ9UI08 416 aaPredicted RBP12.17□□□□□ -0.46
PTP4A1-207ENST00000639568 TICRRQ7Z2Z1 1910 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 B4GALT5O43286 388 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 RNF40O75150 1001 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 SEC24AO95486 1093 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 PRKCBP05771 671 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 ENGP17813 658 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 QARSP47897 775 aaKnown RBP12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 USP11P51784 963 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 AMPD2Q01433 879 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 TNK2Q07912 1038 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 SEMA3BQ13214 749 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 HDAC1Q13547 482 aaPredicted RBP12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 HNRNPDQ14103 355 aaKnown RBP12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 EMC2Q15006 297 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 TMEM196Q5HYL7 178 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 TPGS2Q68CL5 300 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 OTUD6AQ7L8S5 288 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 LURAP1LQ8IV03 231 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 MDM1Q8TC05 714 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 ZMYND12Q9H0C1 365 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 POLR3BQ9NW08 1133 aaPredicted RBP12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 CEP72Q9P209 647 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 TPCN1Q9ULQ1 816 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 RAI2Q9Y5P3 530 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 CELSR3Q9NYQ7 3312 aa12.16□□□□□ -0.46
PTP4A1-207ENST00000639568 NOTCH4Q99466 2003 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 COL4A2P08572 1712 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 A0A1B0GUA9 196 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 A0A1W2PRU2 124 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 ESYT2A0FGR8 921 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 H7C4K7 107 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 PTGESO14684 152 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 EPHA5P54756 1037 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 MBTD1Q05BQ5 628 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 POU5F1BQ06416 359 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 FUT2Q10981 343 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 TMEM132AQ24JP5 1023 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 FSTL4Q6MZW2 842 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 SYT13Q7L8C5 426 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 SHKBP1Q8TBC3 707 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 EXOC4Q96A65 974 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 MTRQ99707 1265 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 SLKQ9H2G2 1235 aaPredicted RBP12.15□□□□□ -0.46
PTP4A1-207ENST00000639568 TMEM189-UBE2V1I3L0A0 370 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 I3L4J1 428 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 CLCNKBP51801 687 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 DMC1Q14565 340 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 AMHR2Q16671 573 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 PFKFB3Q16875 520 aaPredicted RBP12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 FBXO43Q4G163 708 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 XKR9Q5GH70 373 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 SGMS1Q86VZ5 419 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 TSTD1Q8NFU3 115 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 RPLP0P6Q8NHW5 317 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 BPIFB1Q8TDL5 484 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 ACDQ96AP0 544 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 UROC1Q96N76 676 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 GTPBP2Q9BX10 602 aaKnown RBP12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 OBP2AQ9NY56 170 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 MAFFQ9ULX9 164 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
PTP4A1-207ENST00000639568 HECTD1Q9ULT8 2610 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 SPAG17Q6Q759 2223 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 J3QKU1 62 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 TRDMT1O14717 391 aaKnown RBP12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 ADAMTS3O15072 1205 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 TBX3O15119 743 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 MAP3K13O43283 966 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 ZBTB43O43298 467 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 OPHN1O60890 802 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 RECQL4O94761 1208 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 EGFP01133 1207 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 CFIP05156 583 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 DRD1P21728 446 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 VASPP50552 380 aaPredicted RBP12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 FAM193AP78312 1265 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 TRIP6Q15654 476 aaKnown RBP12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 NAB2Q15742 525 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 MAPK6Q16659 721 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 Q4G0T1 1027 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 ARHGAP15Q53QZ3 475 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 APOA5Q6Q788 366 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 LPCAT2Q7L5N7 544 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 IFNLR1Q8IU57 520 aaPredicted RBP12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 SYT12Q8IV01 421 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 LRRC3BQ96PB8 259 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 TPSD1Q9BZJ3 242 aa12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 RBM8AQ9Y5S9 174 aaKnown RBP12.13□□□□□ -0.47
PTP4A1-207ENST00000639568 ZNF462Q96JM2 2506 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 GOLGA8AA7E2F4 631 aa12.12□□□□□ -0.47
PTP4A1-207ENST00000639568 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms