RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 VSIG10LQ86VR7 867 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 ATG4CQ96DT6 458 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 FAM81BQ96LP2 452 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 POLR3FQ9H1D9 316 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-215ENST00000617482 C17orf75Q9HAS0 396 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 MAP3K20Q9NYL2 800 aaKnown RBP12.54□□□□□ -0.4
C11orf54-215ENST00000617482 ADAM22Q9P0K1 906 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 PTPRJQ12913 1337 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 CYP1A1P04798 512 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-215ENST00000617482 CLTAP09496 248 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 MYBL1P10243 752 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 CCND2P30279 289 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 MAN1A1P33908 653 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 MAP2K2P36507 400 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 KLF1Q13351 362 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-215ENST00000617482 MTERF2Q49AM1 385 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 ATP13A4Q4VNC1 1196 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 ZFYVE27Q5T4F4 411 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 C15orf39Q6ZRI6 1047 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 MON1BQ7L1V2 547 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 PNMA8AQ86V59 439 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-215ENST00000617482 SRRM1Q8IYB3 904 aaKnown RBP12.54□□□□□ -0.4
C11orf54-215ENST00000617482 RTKN2Q8IZC4 609 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 TTLL6Q8N841 843 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 CCDC63Q8NA47 563 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 ZBTB45Q96K62 511 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-215ENST00000617482 IFT74Q96LB3 600 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 OSBPL8Q9BZF1 889 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 A1CFQ9NQ94 594 aaKnown RBP12.54□□□□□ -0.4
C11orf54-215ENST00000617482 RNF146Q9NTX7 359 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 NAALADL1Q9UQQ1 740 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 USP15Q9Y4E8 981 aaPredicted RBP12.54□□□□□ -0.4
C11orf54-215ENST00000617482 PCDHB4Q9Y5E5 795 aa12.54□□□□□ -0.4
C11orf54-215ENST00000617482 GSTTP1A0A1W2PQM5 241 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 PI4K2BG5E9Z4 385 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 VWA5AO00534 786 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 EXTL3O43909 919 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 MGRN1O60291 552 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 ZC3H11AO75152 810 aaKnown RBP eCLIP12.53□□□□□ -0.4
C11orf54-215ENST00000617482 DGAT1O75907 488 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 RGS20O76081 388 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 UBOX5O94941 541 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 FDX1P10109 184 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 ATP5DP30049 168 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 NF2P35240 595 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 CENPCQ03188 943 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 ZACNQ401N2 412 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 KAZNQ674X7 775 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 SCARA3Q6AZY7 606 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 CYP4F22Q6NT55 531 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 CCDC60Q8IWA6 550 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-215ENST00000617482 RHOT1Q8IXI2 618 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 TMEM143Q96AN5 459 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 APOBEC3GQ9HC16 384 aaKnown RBP12.53□□□□□ -0.4
C11orf54-215ENST00000617482 CYP26B1Q9NR63 512 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 BAIAP2L1Q9UHR4 511 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-215ENST00000617482 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 VNN1O95497 513 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 EGFRP00533 1210 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 C4BPAP04003 597 aaKnown RBP12.53□□□□□ -0.4
C11orf54-215ENST00000617482 KRT10P13645 584 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 BPIFB4P59827 614 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 PRKCEQ02156 737 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-215ENST00000617482 CCNG2Q16589 344 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 SEZ6Q53EL9 994 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 HP1BP3Q5SSJ5 553 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-215ENST00000617482 ZBTB41Q5SVQ8 909 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 IZUMO3Q5VZ72 239 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 ZNF677Q86XU0 584 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 MCPH1Q8NEM0 835 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 TBC1D31Q96DN5 1066 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 PDLIM7Q9NR12 457 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 ARHGAP28Q9P2N2 729 aa12.53□□□□□ -0.4
C11orf54-215ENST00000617482 AGO2Q9UKV8 859 aaKnown RBP12.53□□□□□ -0.4
C11orf54-215ENST00000617482 PSAPP07602 524 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 GSTA1P08263 222 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 TCF4P15884 667 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 KCNA2P16389 499 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 ACO1P21399 889 aaKnown RBP12.52□□□□□ -0.4
C11orf54-215ENST00000617482 GNA15P30679 374 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 CAV1Q03135 178 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 CXCL9Q07325 125 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 LIN9Q5TKA1 542 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 CCDC89Q8N998 374 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 MTMR14Q8NCE2 650 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 RDM1Q8NG50 284 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.52□□□□□ -0.4
C11orf54-215ENST00000617482 CKAP2Q8WWK9 683 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 TGS1Q96RS0 853 aaKnown RBP12.52□□□□□ -0.4
C11orf54-215ENST00000617482 HAPLN2Q9GZV7 340 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 YY1AP1Q9H869 796 aa12.52□□□□□ -0.4
C11orf54-215ENST00000617482 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms