RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 AGR3Q8TD06 166 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 RAPGEF5Q92565 580 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 THAP2Q9H0W7 228 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 TRABDQ9H4I3 376 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 RIOX1Q9H6W3 641 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 ERAP1Q9NZ08 941 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 LMCD1Q9NZU5 365 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 CCDC78A2IDD5 438 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 CFAP69A5D8W1 941 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 P4HA2O15460 535 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 EXTL3O43909 919 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 PON1P27169 355 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 ANKRD20A4Q4UJ75 823 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 ANKRD20A8PQ5CZ79 823 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 CENPPQ6IPU0 288 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 SYN2Q92777 582 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 MAGEB5Q9BZ81 275 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 NIF3L1Q9GZT8 377 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 VIPAS39Q9H9C1 493 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 SUN2Q9UH99 717 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 SATB2Q9UPW6 733 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 CAPN6Q9Y6Q1 641 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 DFFAO00273 331 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 ASAP2O43150 1006 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 HBP1O60381 514 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 SLC25A27O95847 323 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 ITIH2P19823 946 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 RPS12P25398 132 aaKnown RBP13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 TCF7P36402 384 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 TPI1P60174 286 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 DRP2Q13474 957 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 GIT2Q14161 759 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 PIGHQ14442 188 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 KRT80Q6KB66 452 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 TTC8Q8TAM2 541 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 GPRASP2Q96D09 838 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 NT5C1AQ9BXI3 368 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 NEU2Q9Y3R4 380 aa13.17□□□□□ -0.3
TNFAIP3-206ENST00000612899 WTIPA6NIX2 430 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 TCP11X1B4DZS4 312 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 GSTA4O15217 222 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 CST8O60676 142 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 RBP3P10745 1247 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 CYP2C9P11712 490 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 HSD17B4P51659 736 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 TRAPPC11Q7Z392 1133 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 PIP4K2CQ8TBX8 421 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 EPAS1Q99814 870 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 PREX1Q8TCU6 1659 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 MDH1P40925 334 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 SLC30A9Q6PML9 568 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 C4orf33Q8N1A6 199 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 UBA3Q8TBC4 463 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 HAUS8Q9BT25 410 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 PPME1Q9Y570 386 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 NFIBO00712 420 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 HSPA9P38646 679 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 NLRP11P59045 1033 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 FOXD4Q12950 439 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 STILQ15468 1287 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 ACAD11Q709F0 780 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 DNAJC7Q99615 494 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 ERP44Q9BS26 406 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 NOP53Q9NZM5 478 aaKnown RBP13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 ANGPTL2Q9UKU9 493 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 TMX2Q9Y320 296 aa13.16□□□□□ -0.3
TNFAIP3-206ENST00000612899 CCL15-CCL14A0A0B4J2E2 113 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 SULT1E1P49888 294 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 CCL15Q16663 113 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 RNF219Q5W0B1 726 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 MOXD1Q6UVY6 613 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 LCA5Q86VQ0 697 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 SCFD1Q8WVM8 642 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 UBA6A0AVT1 1052 aaPredicted RBP13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 FASTKD1Q53R41 847 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 FSCBQ5H9T9 825 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 FRA10AC1Q70Z53 315 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 NDUFAF2Q8N183 169 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 SPATA18Q8TC71 538 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 ZIM3Q96PE6 472 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 AKAP3O75969 853 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 AGTP01019 485 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 TPCN2Q8NHX9 752 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 PLEKHA5Q9HAU0 1116 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 SCOCQ9UIL1 159 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 GTF3C4Q9UKN8 822 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 SNX2O60749 519 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 ATP5HO75947 161 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 GRIK1P39086 918 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms