RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 RAPGEF1Q13905 1077 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 IQCEQ6IPM2 695 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 PHLDB3Q6NSJ2 640 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 RRAGAQ7L523 313 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 LRRC52Q8N7C0 313 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 GSTCDQ8NEC7 633 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 CCDC112Q8NEF3 446 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 SYN2Q92777 582 aaPredicted RBP19.98■□□□□ 0.79
SSBP4-212ENST00000601919 JAKMIP2Q96AA8 810 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 C18orf25Q96B23 403 aaPredicted RBP19.98■□□□□ 0.79
SSBP4-212ENST00000601919 HPDLQ96IR7 371 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 PI4K2AQ9BTU6 479 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 VRTNQ9H8Y1 702 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 TUBGCP4Q9UGJ1 667 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 INPP5FQ9Y2H2 1132 aa19.98■□□□□ 0.79
SSBP4-212ENST00000601919 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.97■□□□□ 0.79
SSBP4-212ENST00000601919 AMHP03971 560 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 CCDC172P0C7W6 258 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 LRPAP1P30533 357 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 RPL9P32969 192 aaKnown RBP19.97■□□□□ 0.79
SSBP4-212ENST00000601919 APBA1Q02410 837 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 HS1BP3Q53T59 392 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 ZNF667Q5HYK9 610 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 NOMO2Q5JPE7 1267 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 C9orf57Q5W0N0 161 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 TC2NQ8N9U0 490 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 BAP1Q92560 729 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 DDX27Q96GQ7 796 aaKnown RBP19.97■□□□□ 0.79
SSBP4-212ENST00000601919 UROC1Q96N76 676 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 DNAJC7Q99615 494 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 NAA15Q9BXJ9 866 aaKnown RBP19.97■□□□□ 0.79
SSBP4-212ENST00000601919 CXCL16Q9H2A7 254 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 ABHD10Q9NUJ1 306 aa19.97■□□□□ 0.79
SSBP4-212ENST00000601919 ANO9A1A5B4 782 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 STAT1P42224 750 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 YWHAEP62258 255 aaKnown RBP19.96■□□□□ 0.79
SSBP4-212ENST00000601919 ARID5BQ14865 1188 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 TCTN1Q2MV58 587 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 SFMBT2Q5VUG0 894 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 PDXDC1Q6P996 788 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 ARHGEF19Q8IW93 802 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 LRRC8AQ8IWT6 810 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 CXorf38Q8TB03 319 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 HELQQ8TDG4 1101 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 MRPL9Q9BYD2 267 aaKnown RBP19.96■□□□□ 0.79
SSBP4-212ENST00000601919 NIF3L1Q9GZT8 377 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 XYLT2Q9H1B5 865 aa19.96■□□□□ 0.79
SSBP4-212ENST00000601919 LRRC53A6NM62 1247 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 PIRO00625 290 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 POMCP01189 267 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 PAX3P23760 479 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 GUCY2FP51841 1108 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 JAM2P57087 298 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 TNNC1P63316 161 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 RNASELQ05823 741 aaKnown RBP19.95■□□□□ 0.78
SSBP4-212ENST00000601919 TUSC3Q13454 348 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 CUL2Q13617 745 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 DRAP1Q14919 205 aaPredicted RBP19.95■□□□□ 0.78
SSBP4-212ENST00000601919 SV2CQ496J9 727 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 CLLU1OSQ5K130 101 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 GJB7Q6PEY0 223 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 DPF3Q92784 378 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 BADQ92934 168 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 TATDN2Q93075 761 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 VWCEQ96DN2 955 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 FAM193BQ96PV7 902 aaPredicted RBP19.95■□□□□ 0.78
SSBP4-212ENST00000601919 LBHD1Q9BQE6 289 aaPredicted RBP19.95■□□□□ 0.78
SSBP4-212ENST00000601919 FAM124BQ9H5Z6 455 aaPredicted RBP19.95■□□□□ 0.78
SSBP4-212ENST00000601919 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.95■□□□□ 0.78
SSBP4-212ENST00000601919 MIOSQ9NXC5 875 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 PLAGL2Q9UPG8 496 aa19.95■□□□□ 0.78
SSBP4-212ENST00000601919 F8VZ95 297 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 RNF225M0QZC1 329 aaPredicted RBP19.94■□□□□ 0.78
SSBP4-212ENST00000601919 LRRN2O75325 713 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 FGFR1P11362 822 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 HNRNPH3P31942 346 aaKnown RBP19.94■□□□□ 0.78
SSBP4-212ENST00000601919 KCNJ6P48051 423 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 ARHGAP44Q17R89 818 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 WDR72Q3MJ13 1102 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 SPOPLQ6IQ16 392 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 PSRC1Q6PGN9 363 aaPredicted RBP19.94■□□□□ 0.78
SSBP4-212ENST00000601919 TTC39CQ8N584 583 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 APOBEC3GQ9HC16 384 aaKnown RBP19.94■□□□□ 0.78
SSBP4-212ENST00000601919 RNF19AQ9NV58 838 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 AIPL1Q9NZN9 384 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 NUB1Q9Y5A7 615 aa19.94■□□□□ 0.78
SSBP4-212ENST00000601919 FGBP02675 491 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 ACRP10323 421 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 FERP16591 822 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 SOX5P35711 763 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 TAF6P49848 677 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 AFF1P51825 1210 aaKnown RBP19.93■□□□□ 0.78
SSBP4-212ENST00000601919 SOX4Q06945 474 aaPredicted RBP19.93■□□□□ 0.78
SSBP4-212ENST00000601919 GOLGA8FQ08AF8 430 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 GOLGA8DPQ0D2H9 430 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 NAB2Q15742 525 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 ASIC2Q16515 512 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 TNS4Q8IZW8 715 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 CRIPAKQ8N1N5 446 aa19.93■□□□□ 0.78
SSBP4-212ENST00000601919 SHC3Q92529 594 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms