RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 NT5DC4Q86YG4 428 aa20.4■□□□□ 0.86
CCDC9-205ENST00000600117 PRSS33Q8NF86 280 aa20.4■□□□□ 0.86
CCDC9-205ENST00000600117 TMC2Q8TDI7 906 aa20.4■□□□□ 0.86
CCDC9-205ENST00000600117 PARD3BQ8TEW8 1205 aa20.4■□□□□ 0.86
CCDC9-205ENST00000600117 FAM84AQ96KN4 292 aa20.4■□□□□ 0.86
CCDC9-205ENST00000600117 TUBGCP4Q9UGJ1 667 aa20.4■□□□□ 0.86
CCDC9-205ENST00000600117 MYO15AQ9UKN7 3530 aa20.4■□□□□ 0.86
CCDC9-205ENST00000600117 SLC11A1P49279 550 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 GUCY2FP51841 1108 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 ENPEPQ07075 957 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 TMEM132DQ14C87 1099 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 IRF2BP1Q8IU81 584 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 RNF135Q8IUD6 432 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 EDAQ92838 391 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 CCDC127Q96BQ5 260 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 CGRRF1Q99675 332 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 PRRX2Q99811 253 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 GOLGA2P5Q9HBQ8 144 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 SLC38A7Q9NVC3 462 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 CACNG4Q9UBN1 327 aa20.39■□□□□ 0.85
CCDC9-205ENST00000600117 UBQLN1Q9UMX0 589 aaKnown RBP20.39■□□□□ 0.85
CCDC9-205ENST00000600117 RIF1Q5UIP0 2472 aaKnown RBP20.38■□□□□ 0.85
CCDC9-205ENST00000600117 LRRIQ3A6PVS8 624 aaPredicted RBP20.38■□□□□ 0.85
CCDC9-205ENST00000600117 MBTPS2O43462 519 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 ZC3H11AO75152 810 aaKnown RBP eCLIP20.38■□□□□ 0.85
CCDC9-205ENST00000600117 CYP3A5P20815 502 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 VAMP7P51809 220 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 BCAR1P56945 870 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 DLG4P78352 724 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 CLDN10P78369 228 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 NCAPHQ15003 741 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 LMBRD2Q68DH5 695 aaPredicted RBP20.38■□□□□ 0.85
CCDC9-205ENST00000600117 INTS8Q75QN2 995 aaKnown RBP20.38■□□□□ 0.85
CCDC9-205ENST00000600117 WDR49Q8IV35 697 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 COLGALT1Q8NBJ5 622 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 OR5B17Q8NGF7 314 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 ZNF516Q92618 1163 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 BPIFA3Q9BQP9 254 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 TMEM175Q9BSA9 504 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 INTS13Q9NVM9 706 aa20.38■□□□□ 0.85
CCDC9-205ENST00000600117 CASTOR2A6NHX0 329 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 FGFR1OPO95684 399 aaKnown RBP20.37■□□□□ 0.85
CCDC9-205ENST00000600117 RB1P06400 928 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 GALTP07902 379 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 DLATP10515 647 aaKnown RBP20.37■□□□□ 0.85
CCDC9-205ENST00000600117 LAG3P18627 525 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 LRPAP1P30533 357 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 PBX3P40426 434 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 MARSP56192 900 aaKnown RBP20.37■□□□□ 0.85
CCDC9-205ENST00000600117 ZNF445P59923 1031 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 BFSP1Q12934 665 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 KCNT2Q6UVM3 1135 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 LRSAM1Q6UWE0 723 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 FRMD5Q7Z6J6 570 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 BEST2Q8NFU1 509 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 FAM193BQ96PV7 902 aaPredicted RBP20.37■□□□□ 0.85
CCDC9-205ENST00000600117 FNBP1Q96RU3 617 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 PAAF1Q9BRP4 392 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 NAT10Q9H0A0 1025 aaKnown RBP20.37■□□□□ 0.85
CCDC9-205ENST00000600117 LMAN2LQ9H0V9 348 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 NFE2L3Q9Y4A8 694 aa20.37■□□□□ 0.85
CCDC9-205ENST00000600117 C5orf67F2Z3F1 127 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 XPOTO43592 962 aaKnown RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 GNA14O95837 355 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 TRIM49P0CI25 452 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 TRIM49CP0CI26 452 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 KRT13P13646 458 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 BMPR1AP36894 532 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 ZNF165P49910 485 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 TFAMQ00059 246 aaKnown RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 MYL5Q02045 173 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 DLX2Q07687 328 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 HYAL1Q12794 435 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 SMAD4Q13485 552 aaKnown RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 IQCB1Q15051 598 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 CLUL1Q15846 466 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 TPD52L1Q16890 204 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 CCDC40Q4G0X9 1142 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 SPOUT1Q5T280 376 aaKnown RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 TMEM173Q86WV6 379 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 SLC39A11Q8N1S5 342 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 AOPEPQ8N6M6 819 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 CXorf38Q8TB03 319 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 CNOT6LQ96LI5 555 aaKnown RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 ZNF558Q96NG5 402 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 MTMR12Q9C0I1 747 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 THAP9Q9H5L6 903 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 METTL14Q9HCE5 456 aaKnown RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 SAMSN1Q9NSI8 373 aaKnown RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 ARMCX3Q9UH62 379 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-205ENST00000600117 VPS13AQ96RL7 3174 aa20.36■□□□□ 0.85
CCDC9-205ENST00000600117 DMDP11532 3685 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 F8W810 466 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 TULP1O00294 542 aaPredicted RBP20.35■□□□□ 0.85
CCDC9-205ENST00000600117 NRP1O14786 923 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 TNNI1P19237 187 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 IGFBP6P24592 240 aaPredicted RBP20.35■□□□□ 0.85
CCDC9-205ENST00000600117 CTNNB1P35222 781 aa20.35■□□□□ 0.85
CCDC9-205ENST00000600117 OR1G1P47890 313 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms