RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 UNC45AQ9H3U1 944 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 MLXIPQ9HAP2 919 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 C17orf75Q9HAS0 396 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 ABCB6Q9NP58 842 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 PSD3Q9NYI0 1048 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 HDAC6Q9UBN7 1215 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 SLC9A2Q9UBY0 812 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 EXOC7Q9UPT5 735 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 USP20Q9Y2K6 914 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 SAMM50Q9Y512 469 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 PPME1Q9Y570 386 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 PCDHGC5Q9Y5F6 944 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 DUSP10Q9Y6W6 482 aa6.21□□□□□ -1.42
SDF2-206ENST00000587788 CCDC66A2RUB6 948 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 RSPH10B2B2RC85 870 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 H0YCG3 227 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 NKRFO15226 690 aaKnown RBP eCLIP6.2□□□□□ -1.42
SDF2-206ENST00000587788 TREHO43280 583 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 TGFB1I1O43294 461 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 CHMP2AO43633 222 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 PPFIA4O75335 1185 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 FARP2O94887 1054 aaPredicted RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 TFRCP02786 760 aaKnown RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 H2AFZP0C0S5 128 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 RSPH10BP0C881 870 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 ZNF865P0CJ78 1059 aaPredicted RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 PLS3P13797 630 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 KCNA2P16389 499 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 MSX1P28360 303 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 MZF1P28698 734 aaPredicted RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 OAS2P29728 719 aaKnown RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 CNGA1P29973 690 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 AARSP49588 968 aaKnown RBP eCLIP6.2□□□□□ -1.42
SDF2-206ENST00000587788 JAM2P57087 298 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 VSNL1P62760 191 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 GFPT1Q06210 699 aaPredicted RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 TTLL4Q14679 1199 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 PPP2R5EQ16537 467 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 DCAF17Q5H9S7 520 aaPredicted RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 TMEM63BQ5T3F8 832 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 MEI1Q5TIA1 1274 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 TCERG1LQ5VWI1 586 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 FAM160B1Q5W0V3 765 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 DPY19L2P1Q6NXN4 242 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 ALKBH5Q6P6C2 394 aaKnown RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 METTL7BQ6UX53 244 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 ABHD15Q6UXT9 468 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 SEPT14Q6ZU15 432 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 H2AFVQ71UI9 128 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 ARMCX2Q7L311 632 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 ZNF771Q7L3S4 317 aaPredicted RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 PLPPR4Q7Z2D5 763 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 USP37Q86T82 979 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 ATCAYQ86WG3 371 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 TREML1Q86YW5 311 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 IFT20Q8IY31 132 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 DHX37Q8IY37 1157 aaKnown RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 NOA1Q8NC60 698 aaKnown RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 SPATA4Q8NEY3 305 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 FAM71BQ8TC56 605 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 PIGOQ8TEQ8 1089 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 SCFD2Q8WU76 684 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 EXOC4Q96A65 974 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 PAWRQ96IZ0 340 aaKnown RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 CAPZA3Q96KX2 299 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 SUSD3Q96L08 255 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 FAM81BQ96LP2 452 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 CCDC43Q96MW1 224 aaKnown RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 CRACR2AQ9BSW2 395 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 TLR10Q9BXR5 811 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 KATNBL1Q9H079 304 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 EPC1Q9H2F5 836 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 CRISPLD1Q9H336 500 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 ABHD16BQ9H3Z7 469 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 JPH1Q9HDC5 661 aaPredicted RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 VTA1Q9NP79 307 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 AAASQ9NRG9 546 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 AGPAT3Q9NRZ7 376 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 GCNT4Q9P109 453 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 DDX20Q9UHI6 824 aaKnown RBP6.2□□□□□ -1.42
SDF2-206ENST00000587788 ADAMTS1Q9UHI8 967 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 OGDHLQ9ULD0 1010 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 Q9Y3F1 56 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 PDE4DIPQ5VU43 2346 aa6.2□□□□□ -1.42
SDF2-206ENST00000587788 DNAH12Q6ZR08 3092 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 A0A087X0T9 212 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 IGKV6D-21A0A0A0MT36 114 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.19□□□□□ -1.42
SDF2-206ENST00000587788 MYADML2A6NDP7 307 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 A6NNZ2 444 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 SEPT4O43236 478 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 EXOC3O60645 756 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 SRGAP2O75044 1071 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 HIP1RO75146 1068 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 SASH3O75995 380 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 PDGFAP04085 211 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 FAM228BP0C875 321 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 TXNP10599 105 aaKnown RBP6.19□□□□□ -1.42
SDF2-206ENST00000587788 RHOQP17081 205 aa6.19□□□□□ -1.42
SDF2-206ENST00000587788 SLC9A1P19634 815 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms