RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 FAM213AQ9BRX8 229 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 PCIF1Q9H4Z3 704 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 TMEM206Q9H813 350 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 MAGEF1Q9HAY2 307 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 C11orf16Q9NQ32 467 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 LIMD1Q9UGP4 676 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 SERTAD1Q9UHV2 236 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 FBXW11Q9UKB1 542 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 POLIQ9UNA4 740 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.05■□□□□ 0.48
SREBF1-219ENST00000580540 BACE2Q9Y5Z0 518 aa18.05■□□□□ 0.48
SREBF1-219ENST00000580540 PDCD11Q14690 1871 aaKnown RBP18.04■□□□□ 0.48
SREBF1-219ENST00000580540 A0A1B0GVL5 298 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 GOLGA8IPA6NC78 632 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 GOLGA8JA6NMD2 632 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 H7C4K7 107 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 GPR37L1O60883 481 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 C8AP07357 584 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 ADRB2P07550 413 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 CTXN3Q4LDR2 81 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 SPATA1Q5VX52 437 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 DSTYKQ6XUX3 929 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 OTOP3Q7RTS5 596 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 GRAMD1CQ8IYS0 662 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 ZSWIM2Q8NEG5 633 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 APPL2Q8NEU8 664 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 ZNF707Q96C28 371 aaPredicted RBP18.04■□□□□ 0.48
SREBF1-219ENST00000580540 TSPAN18Q96SJ8 248 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 PYM1Q9BRP8 204 aaKnown RBP18.04■□□□□ 0.48
SREBF1-219ENST00000580540 PRKD2Q9BZL6 878 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 ASB7Q9H672 318 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 ZDHHC7Q9NXF8 308 aa18.04■□□□□ 0.48
SREBF1-219ENST00000580540 TIMM13Q9Y5L4 95 aaPredicted RBP18.04■□□□□ 0.48
SREBF1-219ENST00000580540 MTCL1Q9Y4B5 1905 aaKnown RBP18.04■□□□□ 0.48
SREBF1-219ENST00000580540 PPEF2O14830 753 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 CCL16O15467 120 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 COL9A1P20849 921 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 GBP2P32456 591 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-219ENST00000580540 ELF1P32519 619 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 CUL4BQ13620 913 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 FAM26FQ5R3K3 315 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 ARMCX5Q6P1M9 558 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 CRELD2Q6UXH1 353 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-219ENST00000580540 CYP26C1Q6V0L0 522 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 PLCD3Q8N3E9 789 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 SLC7A14Q8TBB6 771 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 EDAQ92838 391 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 CBWD1Q9BRT8 395 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 WDR6Q9NNW5 1121 aaKnown RBP18.03■□□□□ 0.48
SREBF1-219ENST00000580540 PCDHB8Q9UN66 801 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 USTQ9Y2C2 406 aa18.03■□□□□ 0.48
SREBF1-219ENST00000580540 C2orf16Q68DN1 1984 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 LDHAP00338 332 aaKnown RBP18.02■□□□□ 0.48
SREBF1-219ENST00000580540 ASGR2P07307 311 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 PFKFB1P16118 471 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 GARTP22102 1010 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 CMA1P23946 247 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 ZXDAP98168 799 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 ROR1Q01973 937 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 PTPN21Q16825 1174 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 C9orf57Q5W0N0 161 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 ZNF280DQ6N043 979 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 UNC13DQ70J99 1090 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 USP37Q86T82 979 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 DPP3Q9NY33 737 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 RAPGEFL1Q9UHV5 662 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 FBXL5Q9UKA1 691 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 DERAQ9Y315 318 aa18.02■□□□□ 0.48
SREBF1-219ENST00000580540 CLUHO75153 1309 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 IL18RAPO95256 599 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 SLFN14P0C7P3 912 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 TFAMQ00059 246 aaKnown RBP18.01■□□□□ 0.47
SREBF1-219ENST00000580540 CNNM4Q6P4Q7 775 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 GET4Q7L5D6 327 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-219ENST00000580540 GRASPQ7Z6J2 395 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-219ENST00000580540 NELFCDQ8IXH7 590 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 ZDHHC14Q8IZN3 488 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 ZNF461Q8TAF7 563 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 PAGE5Q96GU1 130 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 SCAND2PQ9GZW5 306 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-219ENST00000580540 GDPD2Q9HCC8 539 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 SLC39A2Q9NP94 309 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 RBAKQ9NYW8 714 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-219ENST00000580540 C2CD2Q9Y426 696 aa18.01■□□□□ 0.47
SREBF1-219ENST00000580540 MYO10Q9HD67 2058 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 WDR27A2RRH5 827 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 PRR33A8MZF0 331 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 M0QZQ0 153 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 PRRG1O14668 218 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 EXTL3O43909 919 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 XYLBO75191 536 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 HNRNPA1P09651 372 aaKnown RBP eCLIP18■□□□□ 0.47
SREBF1-219ENST00000580540 CPB1P15086 417 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 LILRA4P59901 499 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 NTHL1P78549 312 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 POU5F1Q01860 360 aaKnown RBP18■□□□□ 0.47
SREBF1-219ENST00000580540 YWHAHQ04917 246 aaPredicted RBP18■□□□□ 0.47
SREBF1-219ENST00000580540 MRPL58Q14197 206 aaKnown RBP18■□□□□ 0.47
SREBF1-219ENST00000580540 UVSSAQ2YD98 709 aa18■□□□□ 0.47
SREBF1-219ENST00000580540 SLC8B1Q6J4K2 584 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms