RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 JADE1Q6IE81 842 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 SYCP3Q8IZU3 236 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 BEST2Q8NFU1 509 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 SMG7Q92540 1137 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 ZNF707Q96C28 371 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 C7orf25Q9BPX7 421 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 ASB7Q9H672 318 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 TMEM206Q9H813 350 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 KCNH3Q9ULD8 1083 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 DERAQ9Y315 318 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 C2CD2Q9Y426 696 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 DOCK8Q8NF50 2099 aa11.87□□□□□ -0.51
PPP4R1-208ENST00000578178 TECTAO75443 2155 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 H7C4K7 107 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 EIF3DO15371 548 aaKnown RBP eCLIP11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 PRPF6O94906 941 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 HNRNPA1P09651 372 aaKnown RBP eCLIP11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 GARTP22102 1010 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 HOXA9P31269 272 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 OR1D2P34982 312 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 AARSP49588 968 aaKnown RBP eCLIP11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 GUCY2FP51841 1108 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 ROR1Q01973 937 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 PTPN21Q16825 1174 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 FAM26FQ5R3K3 315 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 SLC8B1Q6J4K2 584 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 ZNF280DQ6N043 979 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 RSPO2Q6UXX9 243 aaPredicted RBP11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 UNC13DQ70J99 1090 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 OTOP3Q7RTS5 596 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 BRSK2Q8IWQ3 736 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 CEP57L1Q8IYX8 460 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 ZDHHC14Q8IZN3 488 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 TMEM130Q8N3G9 435 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 APPL2Q8NEU8 664 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 CHAMP1Q96JM3 812 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 LRFN3Q9BTN0 628 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 PIDD1Q9HB75 910 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 WDR6Q9NNW5 1121 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 PCDHB8Q9UN66 801 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 UBE4BO95155 1302 aa11.86□□□□□ -0.51
PPP4R1-208ENST00000578178 PRR33A8MZF0 331 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 M0QZQ0 153 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 TBC1D4O60343 1298 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 IL18RAPO95256 599 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 LDHAP00338 332 aaKnown RBP11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 POU2F2P09086 479 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 PFKFB1P16118 471 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 EHHADHQ08426 723 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 MRPL58Q14197 206 aaKnown RBP11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 CTXN3Q4LDR2 81 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 PPM1LQ5SGD2 360 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 ARMCX5Q6P1M9 558 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 CRELD2Q6UXH1 353 aaPredicted RBP11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 RTL10Q7L3V2 364 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 NT5DC4Q86YG4 428 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 GLIS3Q8NEA6 775 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 SLC7A14Q8TBB6 771 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 EDAQ92838 391 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 HPS3Q969F9 1004 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 ACSF2Q96CM8 615 aaPredicted RBP11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 SAAL1Q96ER3 474 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 CBWD1Q9BRT8 395 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 FAM213AQ9BRX8 229 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 BLZF1Q9H2G9 400 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 FBXL5Q9UKA1 691 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 SCN1AP35498 2009 aa11.85□□□□□ -0.51
PPP4R1-208ENST00000578178 DOCK6Q96HP0 2047 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 MYO10Q9HD67 2058 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 WDR27A2RRH5 827 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 PPEF2O14830 753 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 KIAA0391O15091 583 aaKnown RBP11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 ACTN4O43707 911 aaKnown RBP11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 EXTL3O43909 919 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 XYLBO75191 536 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 SLFN14P0C7P3 912 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 PAX3P23760 479 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 CMA1P23946 247 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 CASP1P29466 404 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 AFMP43652 599 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 ZXDAP98168 799 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 YWHAHQ04917 246 aaPredicted RBP11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 MTMR3Q13615 1198 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 C9orf57Q5W0N0 161 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 SCAND2PQ9GZW5 306 aaPredicted RBP11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 RBAKQ9NYW8 714 aaPredicted RBP11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 USP25Q9UHP3 1055 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 SERTAD1Q9UHV2 236 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 SORCS3Q9UPU3 1222 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
PPP4R1-208ENST00000578178 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-208ENST00000578178 A0A1B0GVL5 298 aa11.83□□□□□ -0.52
PPP4R1-208ENST00000578178 PVALEFA0A1B0GWK0 134 aa11.83□□□□□ -0.52
PPP4R1-208ENST00000578178 ANO9A1A5B4 782 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms