RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 FOXD4Q12950 439 aaPredicted RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 KPNB1Q14974 876 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 LONRF1Q17RB8 773 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 LETM2Q2VYF4 491 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CNPY1Q3B7I2 92 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SLC45A4Q5BKX6 768 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 USP17L2Q6R6M4 530 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SAMD7Q7Z3H4 446 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 VPS36Q86VN1 386 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CYP4X1Q8N118 509 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 OGFOD1Q8N543 542 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 DYDC1Q8WWB3 177 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CRYGNQ8WXF5 182 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 MAML1Q92585 1016 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 OPTNQ96CV9 577 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 LRRC37BQ96QE4 947 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 MIPEPQ99797 713 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SPATA16Q9BXB7 569 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 LRRC19Q9H756 370 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 KANSL2Q9H9L4 492 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 COG5Q9UP83 839 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 PPP2R3BQ9Y5P8 575 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 EIF4E1BA6NMX2 242 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 hCG_1984214I3L0E3 225 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SLC16A3O15427 465 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ATP9AO75110 1047 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ENTPD5O75356 428 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 TTC4O95801 387 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SKIP12755 728 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 BRAFP15056 766 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 TARSP26639 723 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 EPHB2P29323 1055 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 GSTT1P30711 240 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 HOXD13P35453 343 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 COILP38432 576 aaPredicted RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 EIF6P56537 245 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 TAGLNQ01995 201 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SLC34A1Q06495 639 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 PTPROQ16827 1216 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 EXOC3L4Q17RC7 722 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CCDC142Q17RM4 750 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 BMT2Q1RMZ1 405 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 NOL9Q5SY16 702 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SNX30Q5VWJ9 437 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 LCA5Q86VQ0 697 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 LRRC47Q8N1G4 583 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ZNF713Q8N859 430 aaPredicted RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 MORC4Q8TE76 937 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 TBCKQ8TEA7 893 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SCG3Q8WXD2 468 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ERP27Q96DN0 273 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 PTCD3Q96EY7 689 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 NDNQ99608 321 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 DDX23Q9BUQ8 820 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 PITPNM3Q9BZ71 974 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 MMADHCQ9H3L0 296 aaPredicted RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 OCEL1Q9H607 264 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 JMJD4Q9H9V9 463 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 STX18Q9P2W9 335 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ZNF212Q9UDV6 495 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 TMX2Q9Y320 296 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 COMMD3-BMI1R4GMX3 469 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 LOXHD1Q8IVV2 1947 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SMIM23A6NLE4 172 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 C2CD2LO14523 706 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SLC37A4O43826 429 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CREB3O43889 395 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 EDF1O60869 148 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CETPP11597 493 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 GNA11P29992 359 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 RANBP1P43487 201 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 IGBP1P78318 339 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 RASA3Q14644 834 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 SETDB1Q15047 1291 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CALCRLQ16602 461 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 NFIL3Q16649 462 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ABCB5Q2M3G0 1257 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 MUM1Q2TAK8 710 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 WDR72Q3MJ13 1102 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 C1QTNF12Q5T7M4 302 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 HHATQ5VTY9 493 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 PPP1R18Q6NYC8 613 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CCDC137Q6PK04 289 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 INTS8Q75QN2 995 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 MIGA2Q7L4E1 593 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 LRRC8CQ8TDW0 803 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 LZICQ8WZA0 190 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 IRGQQ8WZA9 623 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ARHGEF26Q96DR7 871 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ZSWIM1Q9BR11 485 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CADM1Q9BY67 442 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ZCWPW1Q9H0M4 648 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 UBN1Q9NPG3 1134 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 KRT82Q9NSB4 513 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 DNAAF2Q9NVR5 837 aaKnown RBP5.79□□□□□ -1.48
LINC01541-202ENST00000568095 CIDEBQ9UHD4 219 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 ZNF510Q9Y2H8 683 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 NEU2Q9Y3R4 380 aa5.79□□□□□ -1.48
LINC01541-202ENST00000568095 KLRF2D3W0D1 207 aa5.78□□□□□ -1.48
LINC01541-202ENST00000568095 CETN3O15182 167 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms