RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 SUSD3Q96L08 255 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 CBWD1Q9BRT8 395 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 MAGEF1Q9HAY2 307 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 C5orf42Q9H799 3197 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 ZMYND10O75800 440 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 SLFN14P0C7P3 912 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 LRPAP1P30533 357 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 RAB33AQ14088 237 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 CTXN3Q4LDR2 81 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 TMEM31Q5JXX7 168 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 PPM1LQ5SGD2 360 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 LIN9Q5TKA1 542 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 ARMCX5Q6P1M9 558 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 C15orf39Q6ZRI6 1047 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 UNC13DQ70J99 1090 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 NELFCDQ8IXH7 590 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 CMASQ8NFW8 434 aaPredicted RBP16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 ZNF707Q96C28 371 aaPredicted RBP16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 PAGE5Q96GU1 130 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 PYM1Q9BRP8 204 aaKnown RBP16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 SCAND2PQ9GZW5 306 aaPredicted RBP16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 ASB7Q9H672 318 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 SLC39A2Q9NP94 309 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 LIMD1Q9UGP4 676 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 POLIQ9UNA4 740 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 BACE2Q9Y5Z0 518 aa16.91■□□□□ 0.3
AC009088.3-201ENST00000563605 H7C4K7 107 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 SYN3O14994 580 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 CCL16O15467 120 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 ACTN4O43707 911 aaKnown RBP16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 C8AP07357 584 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 GARTP22102 1010 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 HOXD13P35453 343 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 NUCB2P80303 420 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 C9orf57Q5W0N0 161 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 CNNM4Q6P4Q7 775 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 CCDC149Q6ZUS6 474 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 TDRD5Q8NAT2 981 aaKnown RBP16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 APPL2Q8NEU8 664 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 SLC7A14Q8TBB6 771 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 TSPAN18Q96SJ8 248 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 LRFN3Q9BTN0 628 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 PRKD2Q9BZL6 878 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 DPP3Q9NY33 737 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 FBXL5Q9UKA1 691 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 FBXW11Q9UKB1 542 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 PCDHB8Q9UN66 801 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 CITO14578 2027 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 MUC3AQ02505 3323 aa16.9■□□□□ 0.3
AC009088.3-201ENST00000563605 EXTL3O43909 919 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 IL18RAPO95256 599 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 LDHAP00338 332 aaKnown RBP16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 C1RP00736 705 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 GBP2P32456 591 aaPredicted RBP16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 ANP32AP39687 249 aaKnown RBP16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 SYKP43405 635 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 NDUFA8P51970 172 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 WNT7BP56706 349 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 TFAMQ00059 246 aaKnown RBP16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 ROR1Q01973 937 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 FSIP1Q8NA03 581 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 ZNF507Q8TCN5 953 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 ACSF2Q96CM8 615 aaPredicted RBP16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 FAM84AQ96KN4 292 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 C11orf16Q9NQ32 467 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 ZDHHC7Q9NXF8 308 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 RBAKQ9NYW8 714 aaPredicted RBP16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 DERAQ9Y315 318 aa16.89■□□□□ 0.29
AC009088.3-201ENST00000563605 PLXNA3P51805 1871 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 PVALEFA0A1B0GWK0 134 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 CLIC2O15247 247 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 SPTLC1O15269 473 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 ASGR2P07307 311 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 ELF1P32519 619 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 LILRA4P59901 499 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 MRPL58Q14197 206 aaKnown RBP16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 SLC8B1Q6J4K2 584 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 EPM2AIP1Q7L775 607 aaPredicted RBP16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 OTOP3Q7RTS5 596 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 GRASPQ7Z6J2 395 aaPredicted RBP16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 USP37Q86T82 979 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 EFCAB13Q8IY85 973 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 GPD1LQ8N335 351 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 RDH13Q8NBN7 331 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 ZNF461Q8TAF7 563 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 SENP8Q96LD8 212 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 PDE11AQ9HCR9 933 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 WDR6Q9NNW5 1121 aaKnown RBP16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 HPSEQ9Y251 543 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 C2CD2Q9Y426 696 aa16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.88■□□□□ 0.29
AC009088.3-201ENST00000563605 WDR27A2RRH5 827 aa16.87■□□□□ 0.29
AC009088.3-201ENST00000563605 M0QZQ0 153 aa16.87■□□□□ 0.29
AC009088.3-201ENST00000563605 PIRO00625 290 aa16.87■□□□□ 0.29
AC009088.3-201ENST00000563605 PRRG1O14668 218 aa16.87■□□□□ 0.29
AC009088.3-201ENST00000563605 EIF3DO15371 548 aaKnown RBP eCLIP16.87■□□□□ 0.29
AC009088.3-201ENST00000563605 GPR37L1O60883 481 aa16.87■□□□□ 0.29
AC009088.3-201ENST00000563605 CYP2J2P51589 502 aa16.87■□□□□ 0.29
AC009088.3-201ENST00000563605 NTHL1P78549 312 aa16.87■□□□□ 0.29
AC009088.3-201ENST00000563605 ZXDAP98168 799 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 201.7 ms